RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
HDAC6-229ENST00000486665 MST1RQ04912 1400 aa18.17■□□□□ 0.5
HDAC6-229ENST00000486665 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
HDAC6-229ENST00000486665 NALCNQ8IZF0 1738 aa18.17■□□□□ 0.5
HDAC6-229ENST00000486665 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
HDAC6-229ENST00000486665 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
HDAC6-229ENST00000486665 DCCP43146 1447 aa18.15■□□□□ 0.5
HDAC6-229ENST00000486665 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
HDAC6-229ENST00000486665 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
HDAC6-229ENST00000486665 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
HDAC6-229ENST00000486665 DDX17Q92841 729 aaKnown RBP18.13■□□□□ 0.49
HDAC6-229ENST00000486665 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
HDAC6-229ENST00000486665 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
HDAC6-229ENST00000486665 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
HDAC6-229ENST00000486665 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-229ENST00000486665 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-229ENST00000486665 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-229ENST00000486665 STK26Q9P289 416 aa18.12■□□□□ 0.49
HDAC6-229ENST00000486665 ADGRL3Q9HAR2 1447 aa18.11■□□□□ 0.49
HDAC6-229ENST00000486665 LAMC1P11047 1609 aa18.09■□□□□ 0.49
HDAC6-229ENST00000486665 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-229ENST00000486665 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
HDAC6-229ENST00000486665 YTHDC2Q9H6S0 1430 aaKnown RBP18.08■□□□□ 0.49
HDAC6-229ENST00000486665 LRPPRCP42704 1394 aaKnown RBP18.08■□□□□ 0.49
HDAC6-229ENST00000486665 UPF1Q92900 1129 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC6-229ENST00000486665 AFF2P51816 1311 aa18.06■□□□□ 0.48
HDAC6-229ENST00000486665 PNPLA6Q8IY17 1366 aa18.05■□□□□ 0.48
HDAC6-229ENST00000486665 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
HDAC6-229ENST00000486665 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
HDAC6-229ENST00000486665 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
HDAC6-229ENST00000486665 HSPA5P11021 654 aaKnown RBP18.04■□□□□ 0.48
HDAC6-229ENST00000486665 USP47Q96K76 1375 aa18.04■□□□□ 0.48
HDAC6-229ENST00000486665 RXRBP28702 533 aa18.03■□□□□ 0.48
HDAC6-229ENST00000486665 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-229ENST00000486665 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
HDAC6-229ENST00000486665 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.482e-9■■■■■ 73
HDAC6-229ENST00000486665 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
HDAC6-229ENST00000486665 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.48
HDAC6-229ENST00000486665 LRRC59Q96AG4 307 aaKnown RBP18.01■□□□□ 0.47
HDAC6-229ENST00000486665 SIRT1Q96EB6 747 aa18.01■□□□□ 0.47
HDAC6-229ENST00000486665 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
HDAC6-229ENST00000486665 ORAI2Q96SN7 254 aa18.01■□□□□ 0.47
HDAC6-229ENST00000486665 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-229ENST00000486665 TECPR2O15040 1411 aa18■□□□□ 0.47
HDAC6-229ENST00000486665 C8orf37Q96NL8 207 aa18■□□□□ 0.47
HDAC6-229ENST00000486665 PLEKHH1Q9ULM0 1364 aa18■□□□□ 0.47
HDAC6-229ENST00000486665 RGS12O14924 1447 aa17.99■□□□□ 0.47
HDAC6-229ENST00000486665 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC6-229ENST00000486665 POGKQ9P215 609 aa17.99■□□□□ 0.47
HDAC6-229ENST00000486665 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
HDAC6-229ENST00000486665 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-229ENST00000486665 ADAMTS2O95450 1211 aa17.96■□□□□ 0.47
HDAC6-229ENST00000486665 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.46
HDAC6-229ENST00000486665 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
HDAC6-229ENST00000486665 EIF3AQ14152 1382 aaKnown RBP17.95■□□□□ 0.46
HDAC6-229ENST00000486665 TESK2Q96S53 571 aa17.95■□□□□ 0.46
HDAC6-229ENST00000486665 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
HDAC6-229ENST00000486665 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
HDAC6-229ENST00000486665 COL22A1Q8NFW1 1626 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-229ENST00000486665 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-229ENST00000486665 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
HDAC6-229ENST00000486665 CDC42BPGQ6DT37 1551 aa17.91■□□□□ 0.46
HDAC6-229ENST00000486665 C11orf95C9JLR9 678 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-229ENST00000486665 NGLY1Q96IV0 654 aa17.91■□□□□ 0.46
HDAC6-229ENST00000486665 PXDNQ92626 1479 aa17.89■□□□□ 0.45
HDAC6-229ENST00000486665 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
HDAC6-229ENST00000486665 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
HDAC6-229ENST00000486665 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-229ENST00000486665 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
HDAC6-229ENST00000486665 USP21Q9UK80 565 aa17.86■□□□□ 0.45
HDAC6-229ENST00000486665 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
HDAC6-229ENST00000486665 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-229ENST00000486665 ATRNO75882 1429 aa17.85■□□□□ 0.45
HDAC6-229ENST00000486665 TMF1P82094 1093 aa17.85■□□□□ 0.45
HDAC6-229ENST00000486665 ESCO1Q5FWF5 840 aa17.85■□□□□ 0.45
HDAC6-229ENST00000486665 CDK19Q9BWU1 502 aa17.85■□□□□ 0.45
HDAC6-229ENST00000486665 EP400Q96L91 3159 aa17.84■□□□□ 0.45
HDAC6-229ENST00000486665 WASLO00401 505 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-229ENST00000486665 FNBP4Q8N3X1 1017 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-229ENST00000486665 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
HDAC6-229ENST00000486665 EVC2Q86UK5 1308 aa17.83■□□□□ 0.44
HDAC6-229ENST00000486665 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
HDAC6-229ENST00000486665 CABP2Q9NPB3 220 aa17.83■□□□□ 0.44
HDAC6-229ENST00000486665 SRCAPQ6ZRS2 3230 aa17.83■□□□□ 0.44
HDAC6-229ENST00000486665 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
HDAC6-229ENST00000486665 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
HDAC6-229ENST00000486665 FOXO3O43524 673 aa17.82■□□□□ 0.44
HDAC6-229ENST00000486665 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-229ENST00000486665 NPHP3Q7Z494 1330 aa17.81■□□□□ 0.44
HDAC6-229ENST00000486665 TRPC5Q9UL62 973 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-229ENST00000486665 KIF7Q2M1P5 1343 aa17.8■□□□□ 0.44
HDAC6-229ENST00000486665 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
HDAC6-229ENST00000486665 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
HDAC6-229ENST00000486665 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
HDAC6-229ENST00000486665 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
HDAC6-229ENST00000486665 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
HDAC6-229ENST00000486665 ATAD2Q6PL18 1390 aa17.78■□□□□ 0.44
HDAC6-229ENST00000486665 PRR36Q9H6K5 1346 aa17.77■□□□□ 0.44
HDAC6-229ENST00000486665 CDCA8Q53HL2 280 aa17.77■□□□□ 0.44
HDAC6-229ENST00000486665 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms