RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
CDC7-204ENST00000486509 S1PR4O95977 384 aa8.67□□□□□ -1.02
CDC7-204ENST00000486509 GJA5P36382 358 aa8.67□□□□□ -1.02
CDC7-204ENST00000486509 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
CDC7-204ENST00000486509 LIMD1Q9UGP4 676 aa8.67□□□□□ -1.02
CDC7-204ENST00000486509 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
CDC7-204ENST00000486509 PRDM9Q9NQV7 894 aa8.66□□□□□ -1.02
CDC7-204ENST00000486509 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
CDC7-204ENST00000486509 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
CDC7-204ENST00000486509 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
CDC7-204ENST00000486509 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.02
CDC7-204ENST00000486509 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
CDC7-204ENST00000486509 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
CDC7-204ENST00000486509 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
CDC7-204ENST00000486509 USB1Q9BQ65 265 aaKnown RBP8.64□□□□□ -1.03
CDC7-204ENST00000486509 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
CDC7-204ENST00000486509 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
CDC7-204ENST00000486509 CLK2P49760 499 aaKnown RBP8.63□□□□□ -1.03
CDC7-204ENST00000486509 TUSC1Q2TAM9 212 aa8.63□□□□□ -1.03
CDC7-204ENST00000486509 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
CDC7-204ENST00000486509 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
CDC7-204ENST00000486509 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
CDC7-204ENST00000486509 HRCP23327 699 aa8.61□□□□□ -1.03
CDC7-204ENST00000486509 GGCXP38435 758 aa8.61□□□□□ -1.03
CDC7-204ENST00000486509 MTMR2Q13614 643 aa8.61□□□□□ -1.03
CDC7-204ENST00000486509 QPCTQ16769 361 aa8.61□□□□□ -1.03
CDC7-204ENST00000486509 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
CDC7-204ENST00000486509 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
CDC7-204ENST00000486509 CABLES1Q8TDN4 633 aa8.61□□□□□ -1.03
CDC7-204ENST00000486509 MMP16P51512 607 aa8.6□□□□□ -1.03
CDC7-204ENST00000486509 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
CDC7-204ENST00000486509 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
CDC7-204ENST00000486509 LILRB3O75022 631 aa8.59□□□□□ -1.03
CDC7-204ENST00000486509 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
CDC7-204ENST00000486509 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
CDC7-204ENST00000486509 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
CDC7-204ENST00000486509 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
CDC7-204ENST00000486509 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDC7-204ENST00000486509 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
CDC7-204ENST00000486509 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
CDC7-204ENST00000486509 PRR7Q8TB68 274 aa8.58□□□□□ -1.04
CDC7-204ENST00000486509 SPDYE5A6NIY4 337 aa8.57□□□□□ -1.04
CDC7-204ENST00000486509 JUNDP17535 347 aa8.57□□□□□ -1.04
CDC7-204ENST00000486509 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
CDC7-204ENST00000486509 GOPCQ9HD26 462 aa8.57□□□□□ -1.04
CDC7-204ENST00000486509 RGS20O76081 388 aa8.56□□□□□ -1.04
CDC7-204ENST00000486509 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
CDC7-204ENST00000486509 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
CDC7-204ENST00000486509 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
CDC7-204ENST00000486509 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
CDC7-204ENST00000486509 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
CDC7-204ENST00000486509 PRKD2Q9BZL6 878 aa8.54□□□□□ -1.04
CDC7-204ENST00000486509 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
CDC7-204ENST00000486509 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
CDC7-204ENST00000486509 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
CDC7-204ENST00000486509 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
CDC7-204ENST00000486509 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
CDC7-204ENST00000486509 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
CDC7-204ENST00000486509 SLC19A1P41440 591 aa8.5□□□□□ -1.05
CDC7-204ENST00000486509 PTPRNQ16849 979 aa8.5□□□□□ -1.05
CDC7-204ENST00000486509 LYPD8Q6UX82 237 aa8.5□□□□□ -1.05
CDC7-204ENST00000486509 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
CDC7-204ENST00000486509 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
CDC7-204ENST00000486509 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
CDC7-204ENST00000486509 CCNYL3P0C7X3 344 aa8.48□□□□□ -1.05
CDC7-204ENST00000486509 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
CDC7-204ENST00000486509 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
CDC7-204ENST00000486509 TSC1Q92574 1164 aa8.48□□□□□ -1.05
CDC7-204ENST00000486509 RFC5P40937 340 aa8.47□□□□□ -1.05
CDC7-204ENST00000486509 RPIAP49247 311 aa8.47□□□□□ -1.05
CDC7-204ENST00000486509 CTDSPL2Q05D32 466 aa8.47□□□□□ -1.05
CDC7-204ENST00000486509 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
CDC7-204ENST00000486509 HELBQ8NG08 1087 aaPredicted RBP8.46□□□□□ -1.06
CDC7-204ENST00000486509 F12P00748 615 aaPredicted RBP8.45□□□□□ -1.06
CDC7-204ENST00000486509 KCNH2Q12809 1159 aa8.45□□□□□ -1.06
CDC7-204ENST00000486509 ZNF598Q86UK7 904 aaKnown RBP8.44□□□□□ -1.06
CDC7-204ENST00000486509 MAP10Q9P2G4 905 aa8.44□□□□□ -1.06
CDC7-204ENST00000486509 ZBTB24O43167 697 aaPredicted RBP8.43□□□□□ -1.06
CDC7-204ENST00000486509 AP1G2O75843 785 aa8.43□□□□□ -1.06
CDC7-204ENST00000486509 TRIM32Q13049 653 aa8.43□□□□□ -1.06
CDC7-204ENST00000486509 LRRN4Q8WUT4 740 aa8.43□□□□□ -1.06
CDC7-204ENST00000486509 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
CDC7-204ENST00000486509 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
CDC7-204ENST00000486509 UNC93B1Q9H1C4 597 aa8.42□□□□□ -1.06
CDC7-204ENST00000486509 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
CDC7-204ENST00000486509 CTHP32929 405 aa8.41□□□□□ -1.06
CDC7-204ENST00000486509 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
CDC7-204ENST00000486509 SKOR1P84550 965 aa8.4□□□□□ -1.06
CDC7-204ENST00000486509 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.06
CDC7-204ENST00000486509 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
CDC7-204ENST00000486509 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
CDC7-204ENST00000486509 GDF9O60383 454 aa8.38□□□□□ -1.07
CDC7-204ENST00000486509 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
CDC7-204ENST00000486509 BAP1Q92560 729 aa8.38□□□□□ -1.07
CDC7-204ENST00000486509 SH3BP2P78314 561 aa8.37□□□□□ -1.07
CDC7-204ENST00000486509 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
CDC7-204ENST00000486509 WNT7BP56706 349 aa8.36□□□□□ -1.07
CDC7-204ENST00000486509 NR6A1Q15406 480 aa8.36□□□□□ -1.07
CDC7-204ENST00000486509 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
CDC7-204ENST00000486509 IRX2Q9BZI1 471 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 301.7 ms