RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
UPF3A-207ENST00000481131 POM121Q96HA1 1249 aa10.23□□□□□ -0.77
UPF3A-207ENST00000481131 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
UPF3A-207ENST00000481131 SPDYE5A6NIY4 337 aa10.22□□□□□ -0.77
UPF3A-207ENST00000481131 TMEM259Q4ZIN3 620 aa10.22□□□□□ -0.77
UPF3A-207ENST00000481131 CFHP08603 1231 aa10.21□□□□□ -0.77
UPF3A-207ENST00000481131 FDX1P10109 184 aa10.21□□□□□ -0.77
UPF3A-207ENST00000481131 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.77
UPF3A-207ENST00000481131 FUT2Q10981 343 aa10.2□□□□□ -0.78
UPF3A-207ENST00000481131 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
UPF3A-207ENST00000481131 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
UPF3A-207ENST00000481131 HRCP23327 699 aa10.19□□□□□ -0.78
UPF3A-207ENST00000481131 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
UPF3A-207ENST00000481131 ARID3CA6NKF2 412 aa10.18□□□□□ -0.78
UPF3A-207ENST00000481131 TRAK2O60296 914 aa10.18□□□□□ -0.78
UPF3A-207ENST00000481131 ARXQ96QS3 562 aa10.18□□□□□ -0.78
UPF3A-207ENST00000481131 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
UPF3A-207ENST00000481131 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-207ENST00000481131 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-207ENST00000481131 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
UPF3A-207ENST00000481131 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-207ENST00000481131 NUTM2AQ8IVF1 878 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-207ENST00000481131 FNBP4Q8N3X1 1017 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-207ENST00000481131 COG6Q9Y2V7 657 aa10.17□□□□□ -0.78
UPF3A-207ENST00000481131 AP1G2O75843 785 aa10.16□□□□□ -0.78
UPF3A-207ENST00000481131 ZNF516Q92618 1163 aa10.16□□□□□ -0.78
UPF3A-207ENST00000481131 MTRQ99707 1265 aa10.16□□□□□ -0.78
UPF3A-207ENST00000481131 PROSER2Q86WR7 435 aaPredicted RBP10.15□□□□□ -0.78
UPF3A-207ENST00000481131 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
UPF3A-207ENST00000481131 KCNC4Q03721 635 aa10.14□□□□□ -0.79
UPF3A-207ENST00000481131 APBB1O00213 710 aa10.13□□□□□ -0.79
UPF3A-207ENST00000481131 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
UPF3A-207ENST00000481131 MTMR2Q13614 643 aa10.13□□□□□ -0.79
UPF3A-207ENST00000481131 CFAP99D6REC4 459 aa10.12□□□□□ -0.79
UPF3A-207ENST00000481131 ACTN4O43707 911 aaKnown RBP10.12□□□□□ -0.79
UPF3A-207ENST00000481131 COPS2P61201 443 aa10.12□□□□□ -0.79
UPF3A-207ENST00000481131 SYMPKQ92797 1274 aaKnown RBP10.12□□□□□ -0.79
UPF3A-207ENST00000481131 SOCS7O14512 581 aa10.11□□□□□ -0.79
UPF3A-207ENST00000481131 RAD21O60216 631 aa10.11□□□□□ -0.79
UPF3A-207ENST00000481131 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
UPF3A-207ENST00000481131 KMT5BQ4FZB7 885 aa10.11□□□□□ -0.79
UPF3A-207ENST00000481131 GRIPAP1Q4V328 841 aa10.11□□□□□ -0.79
UPF3A-207ENST00000481131 MORN1Q5T089 497 aa10.11□□□□□ -0.79
UPF3A-207ENST00000481131 NKX2-3Q8TAU0 364 aa10.11□□□□□ -0.79
UPF3A-207ENST00000481131 CTDSPL2Q05D32 466 aa10.1□□□□□ -0.79
UPF3A-207ENST00000481131 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
UPF3A-207ENST00000481131 C6orf229H3BNL8 230 aa10.09□□□□□ -0.79
UPF3A-207ENST00000481131 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
UPF3A-207ENST00000481131 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
UPF3A-207ENST00000481131 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
UPF3A-207ENST00000481131 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
UPF3A-207ENST00000481131 TBC1D2BQ9UPU7 963 aa10.08□□□□□ -0.8
UPF3A-207ENST00000481131 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
UPF3A-207ENST00000481131 HOMEZQ8IX15 550 aa10.07□□□□□ -0.8
UPF3A-207ENST00000481131 IL21Q9HBE4 155 aa10.07□□□□□ -0.8
UPF3A-207ENST00000481131 ZNF777Q9ULD5 760 aaPredicted RBP10.07□□□□□ -0.8
UPF3A-207ENST00000481131 LRRN4Q8WUT4 740 aa10.06□□□□□ -0.8
UPF3A-207ENST00000481131 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
UPF3A-207ENST00000481131 ARID3AQ99856 593 aa10.06□□□□□ -0.8
UPF3A-207ENST00000481131 GPR37L1O60883 481 aa10.05□□□□□ -0.8
UPF3A-207ENST00000481131 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
UPF3A-207ENST00000481131 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
UPF3A-207ENST00000481131 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
UPF3A-207ENST00000481131 TLL1O43897 1013 aa10.04□□□□□ -0.8
UPF3A-207ENST00000481131 HELBQ8NG08 1087 aaPredicted RBP10.04□□□□□ -0.8
UPF3A-207ENST00000481131 TSC1Q92574 1164 aa10.04□□□□□ -0.8
UPF3A-207ENST00000481131 ABL2P42684 1182 aa10.03□□□□□ -0.8
UPF3A-207ENST00000481131 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
UPF3A-207ENST00000481131 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
UPF3A-207ENST00000481131 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
UPF3A-207ENST00000481131 PRR14Q9BWN1 585 aa10.03□□□□□ -0.8
UPF3A-207ENST00000481131 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.81
UPF3A-207ENST00000481131 ZPR1O75312 459 aa10.02□□□□□ -0.81
UPF3A-207ENST00000481131 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
UPF3A-207ENST00000481131 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
UPF3A-207ENST00000481131 IRF5Q13568 498 aa10.01□□□□□ -0.81
UPF3A-207ENST00000481131 Q3C1V9 767 aa10.01□□□□□ -0.81
UPF3A-207ENST00000481131 PPP1R18Q6NYC8 613 aa10.01□□□□□ -0.81
UPF3A-207ENST00000481131 NDUFB9Q9Y6M9 179 aa10.01□□□□□ -0.81
UPF3A-207ENST00000481131 BRICD5Q6PL45 260 aa10□□□□□ -0.81
UPF3A-207ENST00000481131 THAP11Q96EK4 314 aa10□□□□□ -0.81
UPF3A-207ENST00000481131 POM121CA8CG34 1229 aa9.99□□□□□ -0.81
UPF3A-207ENST00000481131 SCUBE3Q8IX30 993 aa9.98□□□□□ -0.81
UPF3A-207ENST00000481131 PRM3Q9NNZ6 103 aa9.98□□□□□ -0.81
UPF3A-207ENST00000481131 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-207ENST00000481131 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
UPF3A-207ENST00000481131 NR6A1Q15406 480 aa9.96□□□□□ -0.82
UPF3A-207ENST00000481131 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
UPF3A-207ENST00000481131 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
UPF3A-207ENST00000481131 NR1I2O75469 434 aa9.94□□□□□ -0.82
UPF3A-207ENST00000481131 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.94□□□□□ -0.82
UPF3A-207ENST00000481131 PPEF1O14829 653 aaPredicted RBP9.93□□□□□ -0.82
UPF3A-207ENST00000481131 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
UPF3A-207ENST00000481131 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
UPF3A-207ENST00000481131 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
UPF3A-207ENST00000481131 ADAMTS19Q8TE59 1207 aa9.92□□□□□ -0.82
UPF3A-207ENST00000481131 S1PR4O95977 384 aa9.91□□□□□ -0.82
UPF3A-207ENST00000481131 JUNDP17535 347 aa9.91□□□□□ -0.82
UPF3A-207ENST00000481131 FAM160A2Q8N612 972 aaPredicted RBP9.91□□□□□ -0.82
UPF3A-207ENST00000481131 GLMNQ92990 594 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms