RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 PCDHB15Q9Y5E8 787 aa11.29□□□□□ -0.6
FNDC3B-208ENST00000476794 Q6ZNB5 142 aa11.28□□□□□ -0.6
FNDC3B-208ENST00000476794 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
FNDC3B-208ENST00000476794 ARXQ96QS3 562 aa11.28□□□□□ -0.6
FNDC3B-208ENST00000476794 GJA5P36382 358 aa11.27□□□□□ -0.61
FNDC3B-208ENST00000476794 QPCTQ16769 361 aa11.27□□□□□ -0.61
FNDC3B-208ENST00000476794 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 A6NJR5 290 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 HOXA2O43364 376 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 RNF40O75150 1001 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 SLC4A3P48751 1232 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 USP46P62068 366 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 TMEM259Q4ZIN3 620 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
FNDC3B-208ENST00000476794 GFRA3O60609 400 aa11.25□□□□□ -0.61
FNDC3B-208ENST00000476794 LILRB3O75022 631 aa11.25□□□□□ -0.61
FNDC3B-208ENST00000476794 ZPR1O75312 459 aa11.25□□□□□ -0.61
FNDC3B-208ENST00000476794 NUTM2BA6NNL0 878 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 NUTM2EB1AL46 878 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 FDX1P10109 184 aa11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 NUTM2AQ8IVF1 878 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
FNDC3B-208ENST00000476794 HLA-CQ95604 372 aa11.23□□□□□ -0.61
FNDC3B-208ENST00000476794 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
FNDC3B-208ENST00000476794 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
FNDC3B-208ENST00000476794 PRR14Q9BWN1 585 aa11.22□□□□□ -0.61
FNDC3B-208ENST00000476794 RAD21O60216 631 aa11.21□□□□□ -0.61
FNDC3B-208ENST00000476794 CFHP08603 1231 aa11.21□□□□□ -0.61
FNDC3B-208ENST00000476794 COPS2P61201 443 aa11.21□□□□□ -0.61
FNDC3B-208ENST00000476794 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
FNDC3B-208ENST00000476794 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
FNDC3B-208ENST00000476794 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
FNDC3B-208ENST00000476794 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
FNDC3B-208ENST00000476794 TRAK2O60296 914 aa11.2□□□□□ -0.62
FNDC3B-208ENST00000476794 AP1G2O75843 785 aa11.2□□□□□ -0.62
FNDC3B-208ENST00000476794 HRCP23327 699 aa11.2□□□□□ -0.62
FNDC3B-208ENST00000476794 FUT2Q10981 343 aa11.2□□□□□ -0.62
FNDC3B-208ENST00000476794 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
FNDC3B-208ENST00000476794 APBB1O00213 710 aa11.19□□□□□ -0.62
FNDC3B-208ENST00000476794 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
FNDC3B-208ENST00000476794 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
FNDC3B-208ENST00000476794 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
FNDC3B-208ENST00000476794 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
FNDC3B-208ENST00000476794 PCDHB3Q9Y5E6 796 aa11.18□□□□□ -0.62
FNDC3B-208ENST00000476794 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
FNDC3B-208ENST00000476794 GGCXP38435 758 aa11.17□□□□□ -0.62
FNDC3B-208ENST00000476794 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
FNDC3B-208ENST00000476794 MTMR14Q8NCE2 650 aa11.17□□□□□ -0.62
FNDC3B-208ENST00000476794 EMID1Q96A84 441 aaPredicted RBP11.17□□□□□ -0.62
FNDC3B-208ENST00000476794 ARID3AQ99856 593 aa11.17□□□□□ -0.62
FNDC3B-208ENST00000476794 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
FNDC3B-208ENST00000476794 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
FNDC3B-208ENST00000476794 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
FNDC3B-208ENST00000476794 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
FNDC3B-208ENST00000476794 MTMR2Q13614 643 aa11.14□□□□□ -0.63
FNDC3B-208ENST00000476794 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
FNDC3B-208ENST00000476794 FNBP4Q8N3X1 1017 aaPredicted RBP11.13□□□□□ -0.63
FNDC3B-208ENST00000476794 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
FNDC3B-208ENST00000476794 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
FNDC3B-208ENST00000476794 TRIM67Q6ZTA4 783 aa11.11□□□□□ -0.63
FNDC3B-208ENST00000476794 TSC1Q92574 1164 aa11.11□□□□□ -0.63
FNDC3B-208ENST00000476794 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
FNDC3B-208ENST00000476794 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
FNDC3B-208ENST00000476794 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
FNDC3B-208ENST00000476794 SYMPKQ92797 1274 aaKnown RBP11.1□□□□□ -0.63
FNDC3B-208ENST00000476794 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
FNDC3B-208ENST00000476794 PDZRN3Q9UPQ7 1066 aa11.09□□□□□ -0.63
FNDC3B-208ENST00000476794 CFAP99D6REC4 459 aa11.08□□□□□ -0.64
FNDC3B-208ENST00000476794 SOCS7O14512 581 aa11.08□□□□□ -0.64
FNDC3B-208ENST00000476794 MORN1Q5T089 497 aa11.08□□□□□ -0.64
FNDC3B-208ENST00000476794 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
FNDC3B-208ENST00000476794 PRM3Q9NNZ6 103 aa11.08□□□□□ -0.64
FNDC3B-208ENST00000476794 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
FNDC3B-208ENST00000476794 TLL1O43897 1013 aa11.07□□□□□ -0.64
FNDC3B-208ENST00000476794 ABL2P42684 1182 aa11.07□□□□□ -0.64
FNDC3B-208ENST00000476794 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
FNDC3B-208ENST00000476794 SLC19A1P41440 591 aa11.06□□□□□ -0.64
FNDC3B-208ENST00000476794 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
FNDC3B-208ENST00000476794 SLC27A5Q9Y2P5 690 aa11.06□□□□□ -0.64
FNDC3B-208ENST00000476794 SPRYD7Q5W111 196 aa11.05□□□□□ -0.64
FNDC3B-208ENST00000476794 PRR7Q8TB68 274 aa11.05□□□□□ -0.64
FNDC3B-208ENST00000476794 HMX1Q9NP08 348 aaPredicted RBP11.05□□□□□ -0.64
FNDC3B-208ENST00000476794 LRRN4Q8WUT4 740 aa11.04□□□□□ -0.64
FNDC3B-208ENST00000476794 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
FNDC3B-208ENST00000476794 ADH1BP00325 375 aa11.03□□□□□ -0.64
FNDC3B-208ENST00000476794 ZNF598Q86UK7 904 aaKnown RBP11.03□□□□□ -0.64
FNDC3B-208ENST00000476794 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
FNDC3B-208ENST00000476794 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
FNDC3B-208ENST00000476794 NR1I2O75469 434 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 S1PR4O95977 384 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 PRR20EP86478 221 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 PRR20CP86479 221 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 PRR20DP86480 221 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 PRR20BP86481 221 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 PRR20AP86496 221 aa11.02□□□□□ -0.65
FNDC3B-208ENST00000476794 Q3C1V9 767 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms