RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 HOXA2O43364 376 aa13.66□□□□□ -0.22
A1CF-209ENST00000473480 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
A1CF-209ENST00000473480 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
A1CF-209ENST00000473480 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
A1CF-209ENST00000473480 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
A1CF-209ENST00000473480 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
A1CF-209ENST00000473480 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
A1CF-209ENST00000473480 TLL1O43897 1013 aa13.63□□□□□ -0.23
A1CF-209ENST00000473480 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
A1CF-209ENST00000473480 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
A1CF-209ENST00000473480 Q3C1V9 767 aa13.62□□□□□ -0.23
A1CF-209ENST00000473480 FMNL1O95466 1100 aaPredicted RBP13.61□□□□□ -0.23
A1CF-209ENST00000473480 ADH1BP00325 375 aa13.61□□□□□ -0.23
A1CF-209ENST00000473480 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
A1CF-209ENST00000473480 THAP11Q96EK4 314 aa13.6□□□□□ -0.23
A1CF-209ENST00000473480 SPSB2Q99619 263 aa13.6□□□□□ -0.23
A1CF-209ENST00000473480 TBC1D2Q9BYX2 928 aa13.6□□□□□ -0.23
A1CF-209ENST00000473480 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
A1CF-209ENST00000473480 GGCXP38435 758 aa13.59□□□□□ -0.23
A1CF-209ENST00000473480 HLA-CQ95604 372 aa13.59□□□□□ -0.23
A1CF-209ENST00000473480 PPP1R18Q6NYC8 613 aa13.58□□□□□ -0.24
A1CF-209ENST00000473480 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
A1CF-209ENST00000473480 BRICD5Q6PL45 260 aa13.57□□□□□ -0.24
A1CF-209ENST00000473480 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
A1CF-209ENST00000473480 FDX1P10109 184 aa13.56□□□□□ -0.24
A1CF-209ENST00000473480 GUCA2AQ02747 115 aa13.56□□□□□ -0.24
A1CF-209ENST00000473480 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.56□□□□□ -0.24
A1CF-209ENST00000473480 RNF19BQ6ZMZ0 732 aa13.55□□□□□ -0.24
A1CF-209ENST00000473480 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
A1CF-209ENST00000473480 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
A1CF-209ENST00000473480 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
A1CF-209ENST00000473480 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
A1CF-209ENST00000473480 NDUFV2P19404 249 aa13.54□□□□□ -0.24
A1CF-209ENST00000473480 GJA5P36382 358 aa13.54□□□□□ -0.24
A1CF-209ENST00000473480 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
A1CF-209ENST00000473480 RGS20O76081 388 aa13.52□□□□□ -0.25
A1CF-209ENST00000473480 S1PR4O95977 384 aa13.52□□□□□ -0.25
A1CF-209ENST00000473480 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
A1CF-209ENST00000473480 FAM117AQ9C073 453 aa13.52□□□□□ -0.25
A1CF-209ENST00000473480 RSBN1LQ6PCB5 846 aaPredicted RBP13.51□□□□□ -0.25
A1CF-209ENST00000473480 USB1Q9BQ65 265 aaKnown RBP13.51□□□□□ -0.25
A1CF-209ENST00000473480 PCDHGC3Q9UN70 934 aa13.51□□□□□ -0.25
A1CF-209ENST00000473480 SPTLC1O15269 473 aa13.5□□□□□ -0.25
A1CF-209ENST00000473480 MSS51Q4VC12 460 aa13.5□□□□□ -0.25
A1CF-209ENST00000473480 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
A1CF-209ENST00000473480 FAM160A2Q8N612 972 aaPredicted RBP13.5□□□□□ -0.25
A1CF-209ENST00000473480 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
A1CF-209ENST00000473480 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
A1CF-209ENST00000473480 RNF223E7ERA6 249 aa13.48□□□□□ -0.25
A1CF-209ENST00000473480 C6orf229H3BNL8 230 aa13.48□□□□□ -0.25
A1CF-209ENST00000473480 RETREG3Q86VR2 466 aa13.46□□□□□ -0.25
A1CF-209ENST00000473480 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.25
A1CF-209ENST00000473480 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
A1CF-209ENST00000473480 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
A1CF-209ENST00000473480 SPDYE5A6NIY4 337 aa13.44□□□□□ -0.26
A1CF-209ENST00000473480 MTMR2Q13614 643 aa13.44□□□□□ -0.26
A1CF-209ENST00000473480 PRDM9Q9NQV7 894 aa13.44□□□□□ -0.26
A1CF-209ENST00000473480 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
A1CF-209ENST00000473480 CLK2P49760 499 aaKnown RBP13.43□□□□□ -0.26
A1CF-209ENST00000473480 TUSC1Q2TAM9 212 aa13.43□□□□□ -0.26
A1CF-209ENST00000473480 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
A1CF-209ENST00000473480 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
A1CF-209ENST00000473480 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
A1CF-209ENST00000473480 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
A1CF-209ENST00000473480 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
A1CF-209ENST00000473480 LIMD1Q9UGP4 676 aa13.42□□□□□ -0.26
A1CF-209ENST00000473480 MMP16P51512 607 aa13.41□□□□□ -0.26
A1CF-209ENST00000473480 PRPF38BQ5VTL8 546 aaKnown RBP13.41□□□□□ -0.26
A1CF-209ENST00000473480 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
A1CF-209ENST00000473480 SKIV2LQ15477 1246 aaKnown RBP13.4□□□□□ -0.26
A1CF-209ENST00000473480 CSPP1Q1MSJ5 1256 aa13.4□□□□□ -0.26
A1CF-209ENST00000473480 DXOO77932 396 aaKnown RBP13.39□□□□□ -0.27
A1CF-209ENST00000473480 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
A1CF-209ENST00000473480 HRCP23327 699 aa13.38□□□□□ -0.27
A1CF-209ENST00000473480 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
A1CF-209ENST00000473480 FCF1Q9Y324 198 aaKnown RBP13.38□□□□□ -0.27
A1CF-209ENST00000473480 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
A1CF-209ENST00000473480 JUNDP17535 347 aa13.37□□□□□ -0.27
A1CF-209ENST00000473480 PRR7Q8TB68 274 aa13.37□□□□□ -0.27
A1CF-209ENST00000473480 ZNF608Q9ULD9 1512 aaPredicted RBP13.37□□□□□ -0.27
A1CF-209ENST00000473480 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
A1CF-209ENST00000473480 NUTM2BA6NNL0 878 aaPredicted RBP13.35□□□□□ -0.27
A1CF-209ENST00000473480 NUTM2EB1AL46 878 aaPredicted RBP13.35□□□□□ -0.27
A1CF-209ENST00000473480 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
A1CF-209ENST00000473480 NUTM2AQ8IVF1 878 aaPredicted RBP13.35□□□□□ -0.27
A1CF-209ENST00000473480 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
A1CF-209ENST00000473480 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
A1CF-209ENST00000473480 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
A1CF-209ENST00000473480 CHD1O14646 1710 aa13.34□□□□□ -0.27
A1CF-209ENST00000473480 LILRB3O75022 631 aa13.34□□□□□ -0.27
A1CF-209ENST00000473480 QPCTQ16769 361 aa13.34□□□□□ -0.27
A1CF-209ENST00000473480 SLC19A1P41440 591 aa13.33□□□□□ -0.28
A1CF-209ENST00000473480 DESI1Q6ICB0 168 aa13.33□□□□□ -0.28
A1CF-209ENST00000473480 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
A1CF-209ENST00000473480 LMTK3Q96Q04 1460 aa13.32□□□□□ -0.28
A1CF-209ENST00000473480 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
A1CF-209ENST00000473480 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
A1CF-209ENST00000473480 CFAP99D6REC4 459 aa13.31□□□□□ -0.28
A1CF-209ENST00000473480 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
A1CF-209ENST00000473480 LIAT1Q6ZQX7 453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms