RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
RTF1-203ENST00000473214 SLC10A3P09131 477 aa9.08□□□□□ -0.96
RTF1-203ENST00000473214 TMCO4Q5TGY1 634 aa9.08□□□□□ -0.96
RTF1-203ENST00000473214 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
RTF1-203ENST00000473214 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
RTF1-203ENST00000473214 FOXD4L4Q8WXT5 416 aaPredicted RBP9.07□□□□□ -0.96
RTF1-203ENST00000473214 ZNF428Q96B54 188 aa9.07□□□□□ -0.96
RTF1-203ENST00000473214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
RTF1-203ENST00000473214 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
RTF1-203ENST00000473214 CCDC82Q8N4S0 544 aa9.06□□□□□ -0.96
RTF1-203ENST00000473214 TRAIPQ9BWF2 469 aa9.06□□□□□ -0.96
RTF1-203ENST00000473214 CECR2Q9BXF3 1484 aa9.06□□□□□ -0.96
RTF1-203ENST00000473214 ST8SIA5O15466 376 aa9.05□□□□□ -0.96
RTF1-203ENST00000473214 FCHSD2O94868 740 aa9.05□□□□□ -0.96
RTF1-203ENST00000473214 ADH1BP00325 375 aa9.05□□□□□ -0.96
RTF1-203ENST00000473214 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
RTF1-203ENST00000473214 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
RTF1-203ENST00000473214 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
RTF1-203ENST00000473214 NR1I2O75469 434 aa9.04□□□□□ -0.96
RTF1-203ENST00000473214 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
RTF1-203ENST00000473214 MFAP1P55081 439 aaKnown RBP9.03□□□□□ -0.96
RTF1-203ENST00000473214 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
RTF1-203ENST00000473214 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
RTF1-203ENST00000473214 OATP04181 439 aa9.02□□□□□ -0.97
RTF1-203ENST00000473214 POLR3GLQ9BT43 218 aa9.02□□□□□ -0.97
RTF1-203ENST00000473214 SLC6A16Q9GZN6 736 aa9.02□□□□□ -0.97
RTF1-203ENST00000473214 SEMA3EO15041 775 aa9.01□□□□□ -0.97
RTF1-203ENST00000473214 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
RTF1-203ENST00000473214 USP35Q9P2H5 1018 aa9.01□□□□□ -0.97
RTF1-203ENST00000473214 E9PSI1 815 aa9□□□□□ -0.97
RTF1-203ENST00000473214 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
RTF1-203ENST00000473214 PKD2L1Q9P0L9 805 aa9□□□□□ -0.97
RTF1-203ENST00000473214 METTL3Q86U44 580 aaKnown RBP8.99□□□□□ -0.97
RTF1-203ENST00000473214 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
RTF1-203ENST00000473214 HIC1Q14526 733 aa8.98□□□□□ -0.97
RTF1-203ENST00000473214 GZF1Q9H116 711 aaPredicted RBP8.98□□□□□ -0.97
RTF1-203ENST00000473214 FOXC1Q12948 553 aa8.97□□□□□ -0.97
RTF1-203ENST00000473214 RSPH4AQ5TD94 716 aa8.97□□□□□ -0.97
RTF1-203ENST00000473214 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
RTF1-203ENST00000473214 UBE2Q2Q8WVN8 375 aa8.97□□□□□ -0.97
RTF1-203ENST00000473214 DACH1Q9UI36 760 aa8.97□□□□□ -0.97
RTF1-203ENST00000473214 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
RTF1-203ENST00000473214 SPSB2Q99619 263 aa8.95□□□□□ -0.98
RTF1-203ENST00000473214 ZMYND10O75800 440 aa8.94□□□□□ -0.98
RTF1-203ENST00000473214 AVPP01185 164 aa8.94□□□□□ -0.98
RTF1-203ENST00000473214 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
RTF1-203ENST00000473214 TOR4AQ9NXH8 423 aa8.93□□□□□ -0.98
RTF1-203ENST00000473214 WFS1O76024 890 aa8.92□□□□□ -0.98
RTF1-203ENST00000473214 FECHP22830 423 aa8.92□□□□□ -0.98
RTF1-203ENST00000473214 RPIAP49247 311 aa8.92□□□□□ -0.98
RTF1-203ENST00000473214 FLIIQ13045 1269 aa8.92□□□□□ -0.98
RTF1-203ENST00000473214 MORN1Q5T089 497 aa8.92□□□□□ -0.98
RTF1-203ENST00000473214 RBM26Q5T8P6 1007 aaKnown RBP8.92□□□□□ -0.98
RTF1-203ENST00000473214 THAP11Q96EK4 314 aa8.92□□□□□ -0.98
RTF1-203ENST00000473214 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
RTF1-203ENST00000473214 GNPATO15228 680 aa8.91□□□□□ -0.98
RTF1-203ENST00000473214 FAM9AQ8IZU1 332 aaPredicted RBP8.91□□□□□ -0.98
RTF1-203ENST00000473214 GMPR2Q9P2T1 348 aaKnown RBP8.91□□□□□ -0.98
RTF1-203ENST00000473214 AXIN1O15169 862 aa8.9□□□□□ -0.98
RTF1-203ENST00000473214 GPR37O15354 613 aa8.9□□□□□ -0.98
RTF1-203ENST00000473214 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
RTF1-203ENST00000473214 EIF4G1Q04637 1599 aaKnown RBP8.9□□□□□ -0.99
RTF1-203ENST00000473214 CD2BP2O95400 341 aaKnown RBP8.89□□□□□ -0.99
RTF1-203ENST00000473214 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
RTF1-203ENST00000473214 TRAK2O60296 914 aa8.88□□□□□ -0.99
RTF1-203ENST00000473214 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
RTF1-203ENST00000473214 FUT2Q10981 343 aa8.88□□□□□ -0.99
RTF1-203ENST00000473214 NFX1Q12986 1120 aaKnown RBP8.88□□□□□ -0.99
RTF1-203ENST00000473214 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
RTF1-203ENST00000473214 FAM177A1Q8N128 213 aaPredicted RBP8.88□□□□□ -0.99
RTF1-203ENST00000473214 FAM160A2Q8N612 972 aaPredicted RBP8.88□□□□□ -0.99
RTF1-203ENST00000473214 RDH13Q8NBN7 331 aa8.88□□□□□ -0.99
RTF1-203ENST00000473214 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
RTF1-203ENST00000473214 SMYD5Q6GMV2 418 aa8.87□□□□□ -0.99
RTF1-203ENST00000473214 AK7Q96M32 723 aa8.87□□□□□ -0.99
RTF1-203ENST00000473214 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
RTF1-203ENST00000473214 FCF1Q9Y324 198 aaKnown RBP8.87□□□□□ -0.99
RTF1-203ENST00000473214 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
RTF1-203ENST00000473214 DDX11L8A8MPP1 907 aa8.86□□□□□ -0.99
RTF1-203ENST00000473214 FMNL1O95466 1100 aaPredicted RBP8.86□□□□□ -0.99
RTF1-203ENST00000473214 GCGRP47871 477 aa8.86□□□□□ -0.99
RTF1-203ENST00000473214 STK17AQ9UEE5 414 aa8.86□□□□□ -0.99
RTF1-203ENST00000473214 WIPF1O43516 503 aa8.85□□□□□ -0.99
RTF1-203ENST00000473214 NLRP7Q8WX94 980 aa8.85□□□□□ -0.99
RTF1-203ENST00000473214 PHOX2BQ99453 314 aa8.85□□□□□ -0.99
RTF1-203ENST00000473214 A6NJR5 290 aa8.84□□□□□ -0.99
RTF1-203ENST00000473214 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
RTF1-203ENST00000473214 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
RTF1-203ENST00000473214 CLUAP1Q96AJ1 413 aa8.84□□□□□ -0.99
RTF1-203ENST00000473214 SULF1Q8IWU6 871 aa8.83□□□□□ -1
RTF1-203ENST00000473214 RETREG2Q8NC44 543 aa8.82□□□□□ -1
RTF1-203ENST00000473214 PRDM9Q9NQV7 894 aa8.82□□□□□ -1
RTF1-203ENST00000473214 TTC24A2A3L6 582 aaPredicted RBP8.81□□□□□ -1
RTF1-203ENST00000473214 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
RTF1-203ENST00000473214 MSS51Q4VC12 460 aa8.81□□□□□ -1
RTF1-203ENST00000473214 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
RTF1-203ENST00000473214 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
RTF1-203ENST00000473214 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
RTF1-203ENST00000473214 LCE2CQ5TA81 110 aa8.79□□□□□ -1
RTF1-203ENST00000473214 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms