RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SH3D19Q5HYK7 790 aa12.2□□□□□ -0.46
SSB-209ENST00000470621 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
SSB-209ENST00000470621 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
SSB-209ENST00000470621 RNF19BQ6ZMZ0 732 aa12.19□□□□□ -0.46
SSB-209ENST00000470621 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
SSB-209ENST00000470621 SPTLC1O15269 473 aa12.18□□□□□ -0.46
SSB-209ENST00000470621 ZPR1O75312 459 aa12.18□□□□□ -0.46
SSB-209ENST00000470621 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
SSB-209ENST00000470621 SYMPKQ92797 1274 aaKnown RBP12.18□□□□□ -0.46
SSB-209ENST00000470621 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
SSB-209ENST00000470621 NR1I2O75469 434 aa12.17□□□□□ -0.46
SSB-209ENST00000470621 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
SSB-209ENST00000470621 PROCA1Q8NCQ7 364 aaPredicted RBP12.17□□□□□ -0.46
SSB-209ENST00000470621 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
SSB-209ENST00000470621 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
SSB-209ENST00000470621 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
SSB-209ENST00000470621 GGCXP38435 758 aa12.15□□□□□ -0.46
SSB-209ENST00000470621 QPCTQ16769 361 aa12.14□□□□□ -0.47
SSB-209ENST00000470621 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
SSB-209ENST00000470621 GJA5P36382 358 aa12.12□□□□□ -0.47
SSB-209ENST00000470621 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
SSB-209ENST00000470621 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
SSB-209ENST00000470621 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
SSB-209ENST00000470621 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
SSB-209ENST00000470621 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
SSB-209ENST00000470621 HRCP23327 699 aa12.1□□□□□ -0.47
SSB-209ENST00000470621 SPSB2Q99619 263 aa12.1□□□□□ -0.47
SSB-209ENST00000470621 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
SSB-209ENST00000470621 ADH1BP00325 375 aa12.09□□□□□ -0.47
SSB-209ENST00000470621 MTMR2Q13614 643 aa12.09□□□□□ -0.47
SSB-209ENST00000470621 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
SSB-209ENST00000470621 TUSC1Q2TAM9 212 aa12.09□□□□□ -0.47
SSB-209ENST00000470621 Q3C1V9 767 aa12.09□□□□□ -0.47
SSB-209ENST00000470621 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
SSB-209ENST00000470621 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
SSB-209ENST00000470621 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
SSB-209ENST00000470621 FAM160A2Q8N612 972 aaPredicted RBP12.08□□□□□ -0.48
SSB-209ENST00000470621 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
SSB-209ENST00000470621 LILRB3O75022 631 aa12.07□□□□□ -0.48
SSB-209ENST00000470621 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
SSB-209ENST00000470621 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
SSB-209ENST00000470621 CFAP99D6REC4 459 aa12.05□□□□□ -0.48
SSB-209ENST00000470621 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
SSB-209ENST00000470621 RETREG3Q86VR2 466 aa12.05□□□□□ -0.48
SSB-209ENST00000470621 USB1Q9BQ65 265 aaKnown RBP12.05□□□□□ -0.48
SSB-209ENST00000470621 S1PR4O95977 384 aa12.04□□□□□ -0.48
SSB-209ENST00000470621 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
SSB-209ENST00000470621 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
SSB-209ENST00000470621 NUTM2DQ5VT03 806 aaPredicted RBP12.03□□□□□ -0.48
SSB-209ENST00000470621 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
SSB-209ENST00000470621 PRR7Q8TB68 274 aa12.03□□□□□ -0.48
SSB-209ENST00000470621 MSS51Q4VC12 460 aa12.02□□□□□ -0.49
SSB-209ENST00000470621 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
SSB-209ENST00000470621 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
SSB-209ENST00000470621 PPP2R2DQ66LE6 453 aa12□□□□□ -0.49
SSB-209ENST00000470621 SPDYE5A6NIY4 337 aa11.99□□□□□ -0.49
SSB-209ENST00000470621 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
SSB-209ENST00000470621 RFC5P40937 340 aa11.98□□□□□ -0.49
SSB-209ENST00000470621 SLC19A1P41440 591 aa11.98□□□□□ -0.49
SSB-209ENST00000470621 TSC1Q92574 1164 aa11.98□□□□□ -0.49
SSB-209ENST00000470621 DXOO77932 396 aaKnown RBP11.97□□□□□ -0.49
SSB-209ENST00000470621 JUNDP17535 347 aa11.97□□□□□ -0.49
SSB-209ENST00000470621 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
SSB-209ENST00000470621 EMID1Q96A84 441 aaPredicted RBP11.97□□□□□ -0.49
SSB-209ENST00000470621 MMP16P51512 607 aa11.96□□□□□ -0.49
SSB-209ENST00000470621 ZNF787Q6DD87 383 aa11.95□□□□□ -0.5
SSB-209ENST00000470621 ANKLE1Q8NAG6 615 aa11.95□□□□□ -0.5
SSB-209ENST00000470621 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
SSB-209ENST00000470621 SPRYD7Q5W111 196 aa11.93□□□□□ -0.5
SSB-209ENST00000470621 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
SSB-209ENST00000470621 AP1G2O75843 785 aa11.92□□□□□ -0.5
SSB-209ENST00000470621 CTDSPL2Q05D32 466 aa11.92□□□□□ -0.5
SSB-209ENST00000470621 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
SSB-209ENST00000470621 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
SSB-209ENST00000470621 DESI1Q6ICB0 168 aa11.91□□□□□ -0.5
SSB-209ENST00000470621 PRR20EP86478 221 aa11.9□□□□□ -0.5
SSB-209ENST00000470621 PRR20CP86479 221 aa11.9□□□□□ -0.5
SSB-209ENST00000470621 PRR20DP86480 221 aa11.9□□□□□ -0.5
SSB-209ENST00000470621 PRR20BP86481 221 aa11.9□□□□□ -0.5
SSB-209ENST00000470621 PRR20AP86496 221 aa11.9□□□□□ -0.5
SSB-209ENST00000470621 HELBQ8NG08 1087 aaPredicted RBP11.9□□□□□ -0.5
SSB-209ENST00000470621 PTPRNQ16849 979 aa11.88□□□□□ -0.51
SSB-209ENST00000470621 LYPD8Q6UX82 237 aa11.88□□□□□ -0.51
SSB-209ENST00000470621 LIAT1Q6ZQX7 453 aa11.88□□□□□ -0.51
SSB-209ENST00000470621 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
SSB-209ENST00000470621 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
SSB-209ENST00000470621 DGAT1O75907 488 aa11.87□□□□□ -0.51
SSB-209ENST00000470621 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
SSB-209ENST00000470621 PKDCCQ504Y2 493 aa11.87□□□□□ -0.51
SSB-209ENST00000470621 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
SSB-209ENST00000470621 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
SSB-209ENST00000470621 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
SSB-209ENST00000470621 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
SSB-209ENST00000470621 CCNYL3P0C7X3 344 aa11.85□□□□□ -0.51
SSB-209ENST00000470621 F12P00748 615 aaPredicted RBP11.84□□□□□ -0.51
SSB-209ENST00000470621 MYT1Q01538 1121 aa11.84□□□□□ -0.51
SSB-209ENST00000470621 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
SSB-209ENST00000470621 GDF9O60383 454 aa11.83□□□□□ -0.52
SSB-209ENST00000470621 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
SSB-209ENST00000470621 ZNF775Q96BV0 537 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms