RNA–Protein interactions for RNA: ENST00000464048.1

DENND4B-204, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-204ENST00000464048 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
DENND4B-204ENST00000464048 TMEM132EQ6IEE7 984 aa18.63■□□□□ 0.57
DENND4B-204ENST00000464048 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
DENND4B-204ENST00000464048 ADGRB2O60241 1585 aa18.62■□□□□ 0.57
DENND4B-204ENST00000464048 AHDC1Q5TGY3 1603 aaPredicted RBP18.61■□□□□ 0.57
DENND4B-204ENST00000464048 DIEXFQ68CQ4 756 aaKnown RBP18.61■□□□□ 0.57
DENND4B-204ENST00000464048 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
DENND4B-204ENST00000464048 C1orf167Q5SNV9 1468 aa18.59■□□□□ 0.57
DENND4B-204ENST00000464048 STK26Q9P289 416 aa18.59■□□□□ 0.57
DENND4B-204ENST00000464048 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.57
DENND4B-204ENST00000464048 HSPA1LP34931 641 aa18.58■□□□□ 0.56
DENND4B-204ENST00000464048 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
DENND4B-204ENST00000464048 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
DENND4B-204ENST00000464048 PRAM1Q96QH2 718 aa18.56■□□□□ 0.56
DENND4B-204ENST00000464048 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
DENND4B-204ENST00000464048 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
DENND4B-204ENST00000464048 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
DENND4B-204ENST00000464048 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
DENND4B-204ENST00000464048 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
DENND4B-204ENST00000464048 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
DENND4B-204ENST00000464048 POGKQ9P215 609 aa18.53■□□□□ 0.56
DENND4B-204ENST00000464048 ROCK2O75116 1388 aaKnown RBP18.53■□□□□ 0.56
DENND4B-204ENST00000464048 NHSL1Q5SYE7 1610 aa18.52■□□□□ 0.56
DENND4B-204ENST00000464048 FMN2Q9NZ56 1722 aa18.52■□□□□ 0.56
DENND4B-204ENST00000464048 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
DENND4B-204ENST00000464048 USP47Q96K76 1375 aa18.52■□□□□ 0.55
DENND4B-204ENST00000464048 COL16A1Q07092 1604 aaPredicted RBP18.52■□□□□ 0.55
DENND4B-204ENST00000464048 CARD11Q9BXL7 1154 aa18.5■□□□□ 0.55
DENND4B-204ENST00000464048 JCADQ9P266 1359 aa18.5■□□□□ 0.55
DENND4B-204ENST00000464048 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
DENND4B-204ENST00000464048 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
DENND4B-204ENST00000464048 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
DENND4B-204ENST00000464048 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
DENND4B-204ENST00000464048 NPHP3Q7Z494 1330 aa18.47■□□□□ 0.55
DENND4B-204ENST00000464048 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
DENND4B-204ENST00000464048 CENPJQ9HC77 1338 aaPredicted RBP18.46■□□□□ 0.55
DENND4B-204ENST00000464048 SOS2Q07890 1332 aaPredicted RBP18.45■□□□□ 0.54
DENND4B-204ENST00000464048 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
DENND4B-204ENST00000464048 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
DENND4B-204ENST00000464048 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
DENND4B-204ENST00000464048 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
DENND4B-204ENST00000464048 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
DENND4B-204ENST00000464048 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
DENND4B-204ENST00000464048 ORAI2Q96SN7 254 aa18.42■□□□□ 0.54
DENND4B-204ENST00000464048 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
DENND4B-204ENST00000464048 PXDNQ92626 1479 aa18.41■□□□□ 0.54
DENND4B-204ENST00000464048 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
DENND4B-204ENST00000464048 ATP7BP35670 1465 aa18.4■□□□□ 0.54
DENND4B-204ENST00000464048 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
DENND4B-204ENST00000464048 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
DENND4B-204ENST00000464048 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
DENND4B-204ENST00000464048 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
DENND4B-204ENST00000464048 PHF8Q9UPP1 1060 aa18.38■□□□□ 0.53
DENND4B-204ENST00000464048 QRICH2Q9H0J4 1663 aa18.38■□□□□ 0.53
DENND4B-204ENST00000464048 ITSN1Q15811 1721 aa18.37■□□□□ 0.53
DENND4B-204ENST00000464048 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
DENND4B-204ENST00000464048 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
DENND4B-204ENST00000464048 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
DENND4B-204ENST00000464048 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
DENND4B-204ENST00000464048 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
DENND4B-204ENST00000464048 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
DENND4B-204ENST00000464048 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
DENND4B-204ENST00000464048 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
DENND4B-204ENST00000464048 PSME1Q06323 249 aa18.34■□□□□ 0.53
DENND4B-204ENST00000464048 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
DENND4B-204ENST00000464048 CCDC61Q9Y6R9 512 aa18.34■□□□□ 0.53
DENND4B-204ENST00000464048 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.52
DENND4B-204ENST00000464048 FOXO3O43524 673 aa18.33■□□□□ 0.52
DENND4B-204ENST00000464048 PUS7Q96PZ0 661 aaKnown RBP18.33■□□□□ 0.52
DENND4B-204ENST00000464048 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
DENND4B-204ENST00000464048 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
DENND4B-204ENST00000464048 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
DENND4B-204ENST00000464048 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
DENND4B-204ENST00000464048 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
DENND4B-204ENST00000464048 PLEKHG3A1L390 1219 aa18.31■□□□□ 0.52
DENND4B-204ENST00000464048 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
DENND4B-204ENST00000464048 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
DENND4B-204ENST00000464048 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
DENND4B-204ENST00000464048 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
DENND4B-204ENST00000464048 SPATA31A3Q5VYP0 1347 aa18.3■□□□□ 0.52
DENND4B-204ENST00000464048 LRP6O75581 1613 aa18.28■□□□□ 0.52
DENND4B-204ENST00000464048 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
DENND4B-204ENST00000464048 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
DENND4B-204ENST00000464048 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
DENND4B-204ENST00000464048 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
DENND4B-204ENST00000464048 PPIP5K1Q6PFW1 1433 aa18.26■□□□□ 0.51
DENND4B-204ENST00000464048 MIER1Q8N108 512 aa18.26■□□□□ 0.51
DENND4B-204ENST00000464048 RGPD8O14715 1765 aaPredicted RBP18.26■□□□□ 0.51
DENND4B-204ENST00000464048 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
DENND4B-204ENST00000464048 TMF1P82094 1093 aa18.25■□□□□ 0.51
DENND4B-204ENST00000464048 TESK2Q96S53 571 aa18.25■□□□□ 0.51
DENND4B-204ENST00000464048 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
DENND4B-204ENST00000464048 TRPM3Q9HCF6 1732 aaPredicted RBP18.25■□□□□ 0.51
DENND4B-204ENST00000464048 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
DENND4B-204ENST00000464048 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
DENND4B-204ENST00000464048 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
DENND4B-204ENST00000464048 ANP32CO43423 234 aa18.22■□□□□ 0.51
DENND4B-204ENST00000464048 ACEP12821 1306 aa18.22■□□□□ 0.51
DENND4B-204ENST00000464048 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
DENND4B-204ENST00000464048 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms