RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.08
PCCA-208ENST00000458283 JCADQ9P266 1359 aa14.52□□□□□ -0.08
PCCA-208ENST00000458283 HIRIP3Q9BW71 556 aaPredicted RBP14.52□□□□□ -0.09
PCCA-208ENST00000458283 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
PCCA-208ENST00000458283 TBX22Q9Y458 520 aa14.51□□□□□ -0.09
PCCA-208ENST00000458283 ADAMTS13Q76LX8 1427 aa14.5□□□□□ -0.09
PCCA-208ENST00000458283 NCOA3Q9Y6Q9 1424 aa14.5□□□□□ -0.09
PCCA-208ENST00000458283 GPRASP1Q5JY77 1395 aa14.5□□□□□ -0.09
PCCA-208ENST00000458283 HSPA5P11021 654 aaKnown RBP14.5□□□□□ -0.09
PCCA-208ENST00000458283 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
PCCA-208ENST00000458283 POTEAQ6S8J7 498 aa14.5□□□□□ -0.09
PCCA-208ENST00000458283 PIK3R4Q99570 1358 aa14.49□□□□□ -0.09
PCCA-208ENST00000458283 C14orf93Q9H972 538 aaKnown RBP14.49□□□□□ -0.09
PCCA-208ENST00000458283 ATF3P18847 181 aa14.48□□□□□ -0.09
PCCA-208ENST00000458283 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
PCCA-208ENST00000458283 STK26Q9P289 416 aa14.48□□□□□ -0.09
PCCA-208ENST00000458283 SHPRHQ149N8 1683 aa14.48□□□□□ -0.09
PCCA-208ENST00000458283 AHDC1Q5TGY3 1603 aaPredicted RBP14.48□□□□□ -0.09
PCCA-208ENST00000458283 EIF4G2P78344 907 aaKnown RBP eCLIP14.47□□□□□ -0.09
PCCA-208ENST00000458283 MEX3CQ5U5Q3 659 aaKnown RBP14.47□□□□□ -0.09
PCCA-208ENST00000458283 METP08581 1390 aa14.47□□□□□ -0.09
PCCA-208ENST00000458283 XRN1Q8IZH2 1706 aaKnown RBP14.46□□□□□ -0.1
PCCA-208ENST00000458283 ARHGEF28Q8N1W1 1705 aaKnown RBP14.46□□□□□ -0.1
PCCA-208ENST00000458283 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
PCCA-208ENST00000458283 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
PCCA-208ENST00000458283 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
PCCA-208ENST00000458283 EIF3AQ14152 1382 aaKnown RBP14.45□□□□□ -0.1
PCCA-208ENST00000458283 SPATA31A6Q5VVP1 1343 aa14.44□□□□□ -0.1
PCCA-208ENST00000458283 AMOTL2Q9Y2J4 779 aa14.44□□□□□ -0.1
PCCA-208ENST00000458283 LRP6O75581 1613 aa14.44□□□□□ -0.1
PCCA-208ENST00000458283 QRICH2Q9H0J4 1663 aa14.43□□□□□ -0.1
PCCA-208ENST00000458283 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
PCCA-208ENST00000458283 DCCP43146 1447 aa14.42□□□□□ -0.1
PCCA-208ENST00000458283 KNDC1Q76NI1 1749 aa14.42□□□□□ -0.1
PCCA-208ENST00000458283 ZNF316A6NFI3 1004 aaPredicted RBP14.42□□□□□ -0.1
PCCA-208ENST00000458283 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
PCCA-208ENST00000458283 ST20-MTHFSA0A0A6YYL1 179 aa14.41□□□□□ -0.1
PCCA-208ENST00000458283 SAFB2Q14151 953 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCCA-208ENST00000458283 NHSL1Q5SYE7 1610 aa14.4□□□□□ -0.1
PCCA-208ENST00000458283 NALCNQ8IZF0 1738 aa14.39□□□□□ -0.11
PCCA-208ENST00000458283 ZNF772Q68DY9 489 aaPredicted RBP14.39□□□□□ -0.11
PCCA-208ENST00000458283 BRINP3Q76B58 766 aa14.39□□□□□ -0.11
PCCA-208ENST00000458283 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
PCCA-208ENST00000458283 CENPJQ9HC77 1338 aaPredicted RBP14.39□□□□□ -0.11
PCCA-208ENST00000458283 DLC1Q96QB1 1528 aa14.38□□□□□ -0.11
PCCA-208ENST00000458283 PLEKHH1Q9ULM0 1364 aa14.37□□□□□ -0.11
PCCA-208ENST00000458283 NUTM2BA6NNL0 878 aaPredicted RBP14.37□□□□□ -0.11
PCCA-208ENST00000458283 NUTM2EB1AL46 878 aaPredicted RBP14.37□□□□□ -0.11
PCCA-208ENST00000458283 NUTM2AQ8IVF1 878 aaPredicted RBP14.37□□□□□ -0.11
PCCA-208ENST00000458283 PRAM1Q96QH2 718 aa14.37□□□□□ -0.11
PCCA-208ENST00000458283 POGKQ9P215 609 aa14.37□□□□□ -0.11
PCCA-208ENST00000458283 MST1RQ04912 1400 aa14.37□□□□□ -0.11
PCCA-208ENST00000458283 ROBO2Q9HCK4 1378 aa14.36□□□□□ -0.11
PCCA-208ENST00000458283 ADGRL3Q9HAR2 1447 aa14.36□□□□□ -0.11
PCCA-208ENST00000458283 TECPR2O15040 1411 aa14.35□□□□□ -0.11
PCCA-208ENST00000458283 MINK1Q8N4C8 1332 aaPredicted RBP14.35□□□□□ -0.11
PCCA-208ENST00000458283 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
PCCA-208ENST00000458283 PTCH1Q13635 1447 aa14.34□□□□□ -0.11
PCCA-208ENST00000458283 WAPLQ7Z5K2 1190 aa14.34□□□□□ -0.11
PCCA-208ENST00000458283 TULP4Q9NRJ4 1543 aa14.33□□□□□ -0.12
PCCA-208ENST00000458283 TESK2Q96S53 571 aa14.33□□□□□ -0.12
PCCA-208ENST00000458283 C11orf95C9JLR9 678 aaPredicted RBP14.32□□□□□ -0.12
PCCA-208ENST00000458283 CCDC7Q96M83 1385 aa14.32□□□□□ -0.12
PCCA-208ENST00000458283 RXRBP28702 533 aa14.31□□□□□ -0.12
PCCA-208ENST00000458283 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
PCCA-208ENST00000458283 AFF2P51816 1311 aa14.31□□□□□ -0.12
PCCA-208ENST00000458283 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
PCCA-208ENST00000458283 WASHC2AQ641Q2 1341 aa14.31□□□□□ -0.12
PCCA-208ENST00000458283 TMF1P82094 1093 aa14.3□□□□□ -0.12
PCCA-208ENST00000458283 CDK12Q9NYV4 1490 aaPredicted RBP14.29□□□□□ -0.12
PCCA-208ENST00000458283 C1orf167Q5SNV9 1468 aa14.28□□□□□ -0.12
PCCA-208ENST00000458283 PNPLA6Q8IY17 1366 aa14.28□□□□□ -0.12
PCCA-208ENST00000458283 DDX17Q92841 729 aaKnown RBP14.28□□□□□ -0.12
PCCA-208ENST00000458283 C8orf37Q96NL8 207 aa14.28□□□□□ -0.12
PCCA-208ENST00000458283 SBNO2Q9Y2G9 1366 aa14.28□□□□□ -0.12
PCCA-208ENST00000458283 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
PCCA-208ENST00000458283 UPF1Q92900 1129 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCCA-208ENST00000458283 MYOM1P52179 1685 aa14.26□□□□□ -0.13
PCCA-208ENST00000458283 EVC2Q86UK5 1308 aa14.25□□□□□ -0.13
PCCA-208ENST00000458283 SRPK2P78362 688 aaKnown RBP14.25□□□□□ -0.13
PCCA-208ENST00000458283 DDX10Q13206 875 aaKnown RBP14.25□□□□□ -0.13
PCCA-208ENST00000458283 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
PCCA-208ENST00000458283 ADAMTS2O95450 1211 aa14.23□□□□□ -0.13
PCCA-208ENST00000458283 RGS12O14924 1447 aa14.23□□□□□ -0.13
PCCA-208ENST00000458283 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
PCCA-208ENST00000458283 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
PCCA-208ENST00000458283 SIRT1Q96EB6 747 aa14.22□□□□□ -0.13
PCCA-208ENST00000458283 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
PCCA-208ENST00000458283 QTRT2Q9H974 415 aaKnown RBP14.22□□□□□ -0.13
PCCA-208ENST00000458283 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
PCCA-208ENST00000458283 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
PCCA-208ENST00000458283 ORAI2Q96SN7 254 aa14.21□□□□□ -0.13
PCCA-208ENST00000458283 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
PCCA-208ENST00000458283 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.14
PCCA-208ENST00000458283 COL22A1Q8NFW1 1626 aaPredicted RBP14.2□□□□□ -0.14
PCCA-208ENST00000458283 TMC1Q8TDI8 760 aa14.2□□□□□ -0.14
PCCA-208ENST00000458283 SOS2Q07890 1332 aaPredicted RBP14.19□□□□□ -0.14
PCCA-208ENST00000458283 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
PCCA-208ENST00000458283 WASLO00401 505 aaPredicted RBP14.19□□□□□ -0.14
PCCA-208ENST00000458283 ATP7BP35670 1465 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms