RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 FOXD4L6Q3SYB3 417 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 TMEM132EQ6IEE7 984 aa16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 FOXD4L3Q6VB84 417 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 A0A0U1RQG5 324 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 TPM2P07951 284 aa16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 SMC3Q9UQE7 1217 aa16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 AMOTL1Q8IY63 956 aa16.05■□□□□ 0.16
SMARCA4-205ENST00000450717 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
SMARCA4-205ENST00000450717 CPLX1O14810 134 aa16.05■□□□□ 0.16
SMARCA4-205ENST00000450717 DAPK1P53355 1430 aa16.05■□□□□ 0.16
SMARCA4-205ENST00000450717 TRDNQ13061 729 aa16.05■□□□□ 0.16
SMARCA4-205ENST00000450717 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
SMARCA4-205ENST00000450717 HSP90AA2PQ14568 343 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-205ENST00000450717 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-205ENST00000450717 CDCA7LQ96GN5 454 aa16.04■□□□□ 0.16
SMARCA4-205ENST00000450717 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-205ENST00000450717 RAPGEF4Q8WZA2 1011 aa16.03■□□□□ 0.16
SMARCA4-205ENST00000450717 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-205ENST00000450717 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
SMARCA4-205ENST00000450717 GNAI3P08754 354 aa16.03■□□□□ 0.16
SMARCA4-205ENST00000450717 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-205ENST00000450717 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
SMARCA4-205ENST00000450717 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-205ENST00000450717 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-205ENST00000450717 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-205ENST00000450717 TNNT3P45378 269 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-205ENST00000450717 BICD2Q8TD16 824 aa16.02■□□□□ 0.16
SMARCA4-205ENST00000450717 ERBINQ96RT1 1412 aa16.02■□□□□ 0.15
SMARCA4-205ENST00000450717 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.15
SMARCA4-205ENST00000450717 NFKBIBQ15653 356 aa16.02■□□□□ 0.15
SMARCA4-205ENST00000450717 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.15
SMARCA4-205ENST00000450717 VPS53Q5VIR6 699 aa16.02■□□□□ 0.15
SMARCA4-205ENST00000450717 PES1O00541 588 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-205ENST00000450717 GCC1Q96CN9 775 aa16.01■□□□□ 0.15
SMARCA4-205ENST00000450717 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
SMARCA4-205ENST00000450717 APPP05067 770 aa16■□□□□ 0.15
SMARCA4-205ENST00000450717 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
SMARCA4-205ENST00000450717 CCDC47Q96A33 483 aaKnown RBP16■□□□□ 0.15
SMARCA4-205ENST00000450717 VPS37CA5D8V6 355 aaPredicted RBP16■□□□□ 0.15
SMARCA4-205ENST00000450717 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
SMARCA4-205ENST00000450717 WDR63Q8IWG1 891 aa15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 ANKRD20A12PQ8NF67 263 aa15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 PSMA5P28066 241 aa15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-205ENST00000450717 NLRP6P59044 892 aa15.98■□□□□ 0.15
SMARCA4-205ENST00000450717 SASS6Q6UVJ0 657 aa15.98■□□□□ 0.15
SMARCA4-205ENST00000450717 ERICH2A1L162 156 aa15.98■□□□□ 0.15
SMARCA4-205ENST00000450717 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-205ENST00000450717 MCM2P49736 904 aa15.97■□□□□ 0.15
SMARCA4-205ENST00000450717 MRE11P49959 708 aa15.97■□□□□ 0.15
SMARCA4-205ENST00000450717 CCDC70Q6NSX1 233 aa15.97■□□□□ 0.15
SMARCA4-205ENST00000450717 RPGRIP1LQ68CZ1 1315 aa15.97■□□□□ 0.15
SMARCA4-205ENST00000450717 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-205ENST00000450717 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
SMARCA4-205ENST00000450717 NFXL1Q6ZNB6 911 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 NESP48681 1621 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 GPS2Q13227 327 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 PRAM1Q96QH2 718 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 GPRASP1Q5JY77 1395 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 ATF3P18847 181 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 VPS37DQ86XT2 251 aa15.96■□□□□ 0.15
SMARCA4-205ENST00000450717 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
SMARCA4-205ENST00000450717 RABEP1Q15276 862 aa15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 HIP1O00291 1037 aa15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 CLASRPQ8N2M8 674 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 SAFBQ15424 915 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
SMARCA4-205ENST00000450717 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 IPO7O95373 1038 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 RALYLQ86SE5 291 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 LETM1O95202 739 aaPredicted RBP15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 NAIPQ13075 1403 aa15.94■□□□□ 0.14
SMARCA4-205ENST00000450717 ERC1Q8IUD2 1116 aa15.93■□□□□ 0.14
SMARCA4-205ENST00000450717 NLRP2Q9NX02 1062 aa15.93■□□□□ 0.14
SMARCA4-205ENST00000450717 GNAI2P04899 355 aa15.93■□□□□ 0.14
SMARCA4-205ENST00000450717 AIMP1Q12904 312 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-205ENST00000450717 NEUROD6Q96NK8 337 aa15.93■□□□□ 0.14
SMARCA4-205ENST00000450717 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
SMARCA4-205ENST00000450717 MBD3O95983 291 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 CCAR2Q8N163 923 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 FAM43AQ8N2R8 423 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 SURF6O75683 361 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 ZNF592Q92610 1267 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 PDE4CQ08493 712 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 CDK19Q9BWU1 502 aa15.92■□□□□ 0.14
SMARCA4-205ENST00000450717 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms