RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	PKP1	Q13835	747 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	C1orf115	Q9H7X2	142 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	A2M	P01023	1474 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	BAG4	O95429	457 aa	Known RBP	12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	CBX1	P83916	185 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	ANKRD45	Q5TZF3	282 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	MORC1	Q86VD1	984 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	PPP1R9B	Q96SB3	815 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	CARD14	Q9BXL6	1004 aa		12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	IGSF3	O75054	1194 aa		12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	PRPF40A	O75400	957 aa	Known RBP	12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	SMC5	Q8IY18	1101 aa		12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	TRO	Q12816	1431 aa	Predicted RBP	12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	TRIM27	P14373	513 aa		12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	IQGAP2	Q13576	1575 aa		12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	WDR7	Q9Y4E6	1490 aa		12.9	□□□□□ -0.34
SORBS2-231	ENST00000449407	PLB1	Q6P1J6	1458 aa		12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407		K7ELQ4	463 aa	Predicted RBP	12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	ZSCAN23	Q3MJ62	389 aa		12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	CDCA8	Q53HL2	280 aa		12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	DDIT3	P35638	169 aa		12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	EXOSC9	Q06265	439 aa	Known RBP	12.89	□□□□□ -0.35
SORBS2-231	ENST00000449407	KDM5D	Q9BY66	1539 aa		12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	TMEM57	Q8N5G2	664 aa		12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	SYCE3	A1L190	88 aa		12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	RUNDC1	Q96C34	613 aa		12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	ZNF830	Q96NB3	372 aa	Predicted RBP	12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	NOB1	Q9ULX3	412 aa	Known RBP	12.88	□□□□□ -0.35
SORBS2-231	ENST00000449407	KLHL40	Q2TBA0	621 aa		12.87	□□□□□ -0.35
SORBS2-231	ENST00000449407	U2SURP	O15042	1029 aa	Known RBP	12.87	□□□□□ -0.35
SORBS2-231	ENST00000449407	GPRASP1	Q5JY77	1395 aa		12.87	□□□□□ -0.35
SORBS2-231	ENST00000449407	SSH1	Q8WYL5	1049 aa		12.86	□□□□□ -0.35
SORBS2-231	ENST00000449407	MTHFS	P49914	203 aa		12.86	□□□□□ -0.35
SORBS2-231	ENST00000449407	KIF2C	Q99661	725 aa		12.86	□□□□□ -0.35
SORBS2-231	ENST00000449407	NOL7	Q9UMY1	257 aa	Known RBP	12.86	□□□□□ -0.35
SORBS2-231	ENST00000449407	RBM25	P49756	843 aa	Known RBP	12.86	□□□□□ -0.35
SORBS2-231	ENST00000449407	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.86	□□□□□ -0.35
SORBS2-231	ENST00000449407	APBB1	O00213	710 aa		12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	C17orf53	Q8N3J3	647 aa	Predicted RBP	12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	MAP7D2	Q96T17	732 aa		12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	NINL	Q9Y2I6	1382 aa		12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	PLCB2	Q00722	1185 aa		12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	SNX21	Q969T3	373 aa		12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.85	□□□□□ -0.35
SORBS2-231	ENST00000449407	TRPM1	Q7Z4N2	1603 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	ADGRL2	O95490	1459 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	SPDYE4	A6NLX3	237 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	TBC1D9	Q6ZT07	1266 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	CFAP70	Q5T0N1	1121 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	NOL8	Q76FK4	1167 aa	Known RBP	12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	ZKSCAN5	Q9Y2L8	839 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	ASXL1	Q8IXJ9	1541 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	PIK3C2G	O75747	1445 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	CEP170	Q5SW79	1584 aa		12.84	□□□□□ -0.35
SORBS2-231	ENST00000449407	CHD1L	Q86WJ1	897 aa		12.83	□□□□□ -0.35
SORBS2-231	ENST00000449407	SLC12A5	Q9H2X9	1139 aa		12.83	□□□□□ -0.35
SORBS2-231	ENST00000449407	DDX19B	Q9UMR2	479 aa		12.83	□□□□□ -0.35
SORBS2-231	ENST00000449407	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.83	□□□□□ -0.35
SORBS2-231	ENST00000449407	VIRMA	Q69YN4	1812 aa	Known RBP	12.83	□□□□□ -0.36
SORBS2-231	ENST00000449407	PLA2R1	Q13018	1463 aa		12.83	□□□□□ -0.36
SORBS2-231	ENST00000449407	FAM135A	Q9P2D6	1515 aa		12.83	□□□□□ -0.36
SORBS2-231	ENST00000449407	ELL2	O00472	640 aa	Predicted RBP	12.83	□□□□□ -0.36
SORBS2-231	ENST00000449407	ZGPAT	Q8N5A5	531 aa	Known RBP	12.83	□□□□□ -0.36
SORBS2-231	ENST00000449407	ATF7IP	Q6VMQ6	1270 aa		12.82	□□□□□ -0.36
SORBS2-231	ENST00000449407	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.82	□□□□□ -0.36
SORBS2-231	ENST00000449407	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.82	□□□□□ -0.36
SORBS2-231	ENST00000449407	DYNC1I1	O14576	645 aa		12.81	□□□□□ -0.36
SORBS2-231	ENST00000449407	LMBRD1	Q9NUN5	540 aa		12.81	□□□□□ -0.36
SORBS2-231	ENST00000449407	ZNF500	O60304	480 aa	Predicted RBP	12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	FGD1	P98174	961 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	SASS6	Q6UVJ0	657 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	GPT2	Q8TD30	523 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	PTMS	P20962	102 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	HDAC1	Q13547	482 aa	Predicted RBP	12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	BBX	Q8WY36	941 aa	Predicted RBP	12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	TMEM63C	Q9P1W3	806 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	PRDM15	P57071	1507 aa	Predicted RBP	12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	CHGA	P10645	457 aa	Known RBP	12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	NUCB1	Q02818	461 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	NCOA3	Q9Y6Q9	1424 aa		12.8	□□□□□ -0.36
SORBS2-231	ENST00000449407	WDR63	Q8IWG1	891 aa		12.79	□□□□□ -0.36
SORBS2-231	ENST00000449407	KIF16B	Q96L93	1317 aa		12.79	□□□□□ -0.36
SORBS2-231	ENST00000449407	AK9	Q5TCS8	1911 aa		12.79	□□□□□ -0.36
SORBS2-231	ENST00000449407	PPP4R3B	Q5MIZ7	849 aa		12.79	□□□□□ -0.36
SORBS2-231	ENST00000449407	CSPP1	Q1MSJ5	1256 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	CCDC94	Q9BW85	323 aa	Predicted RBP	12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	GDPD2	Q9HCC8	539 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	ADGB	Q8N7X0	1667 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	ZSCAN20	P17040	1043 aa	Predicted RBP	12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	ZNF445	P59923	1031 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	TRAK1	Q9UPV9	953 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	DISP1	Q96F81	1524 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	TTC12	Q9H892	705 aa	Predicted RBP	12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	ZBTB40	Q9NUA8	1239 aa		12.78	□□□□□ -0.36
SORBS2-231	ENST00000449407	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.77	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms