RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 LAMC1P11047 1609 aa20.49■□□□□ 0.87
SREBF1-207ENST00000447641 EP400Q96L91 3159 aa20.48■□□□□ 0.87
SREBF1-207ENST00000447641 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
SREBF1-207ENST00000447641 L3MBTL2Q969R5 705 aa20.46■□□□□ 0.87
SREBF1-207ENST00000447641 AFF2P51816 1311 aa20.46■□□□□ 0.87
SREBF1-207ENST00000447641 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
SREBF1-207ENST00000447641 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
SREBF1-207ENST00000447641 NUTM2BA6NNL0 878 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-207ENST00000447641 NUTM2EB1AL46 878 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-207ENST00000447641 NUTM2AQ8IVF1 878 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-207ENST00000447641 PNPLA6Q8IY17 1366 aa20.44■□□□□ 0.86
SREBF1-207ENST00000447641 RXRBP28702 533 aa20.43■□□□□ 0.86
SREBF1-207ENST00000447641 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
SREBF1-207ENST00000447641 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
SREBF1-207ENST00000447641 ABCC11Q96J66 1382 aa20.43■□□□□ 0.86
SREBF1-207ENST00000447641 TECPR2O15040 1411 aa20.43■□□□□ 0.86
SREBF1-207ENST00000447641 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
SREBF1-207ENST00000447641 DDX17Q92841 729 aaKnown RBP20.42■□□□□ 0.86
SREBF1-207ENST00000447641 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
SREBF1-207ENST00000447641 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
SREBF1-207ENST00000447641 ADGRB1O14514 1584 aa20.41■□□□□ 0.86
SREBF1-207ENST00000447641 YTHDC2Q9H6S0 1430 aaKnown RBP20.4■□□□□ 0.86
SREBF1-207ENST00000447641 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.86
SREBF1-207ENST00000447641 KIAA1210Q9ULL0 1709 aa20.39■□□□□ 0.86
SREBF1-207ENST00000447641 SIRT1Q96EB6 747 aa20.39■□□□□ 0.85
SREBF1-207ENST00000447641 COL22A1Q8NFW1 1626 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-207ENST00000447641 C1orf167Q5SNV9 1468 aa20.37■□□□□ 0.85
SREBF1-207ENST00000447641 STK26Q9P289 416 aa20.36■□□□□ 0.85
SREBF1-207ENST00000447641 C8orf37Q96NL8 207 aa20.34■□□□□ 0.85
SREBF1-207ENST00000447641 MARF1Q9Y4F3 1742 aaKnown RBP20.33■□□□□ 0.85
SREBF1-207ENST00000447641 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
SREBF1-207ENST00000447641 LRRC59Q96AG4 307 aaKnown RBP20.32■□□□□ 0.84
SREBF1-207ENST00000447641 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
SREBF1-207ENST00000447641 WAPLQ7Z5K2 1190 aa20.31■□□□□ 0.84
SREBF1-207ENST00000447641 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
SREBF1-207ENST00000447641 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
SREBF1-207ENST00000447641 QTRT2Q9H974 415 aaKnown RBP20.3■□□□□ 0.84
SREBF1-207ENST00000447641 TRPM1Q7Z4N2 1603 aa20.29■□□□□ 0.84
SREBF1-207ENST00000447641 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
SREBF1-207ENST00000447641 PLEKHH1Q9ULM0 1364 aa20.29■□□□□ 0.84
SREBF1-207ENST00000447641 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-207ENST00000447641 TIMELESSQ9UNS1 1208 aa20.27■□□□□ 0.84
SREBF1-207ENST00000447641 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.83
SREBF1-207ENST00000447641 PRAM1Q96QH2 718 aa20.26■□□□□ 0.83
SREBF1-207ENST00000447641 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
SREBF1-207ENST00000447641 ATRNO75882 1429 aa20.26■□□□□ 0.83
SREBF1-207ENST00000447641 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
SREBF1-207ENST00000447641 ADAMTS2O95450 1211 aa20.24■□□□□ 0.83
SREBF1-207ENST00000447641 ORAI2Q96SN7 254 aa20.24■□□□□ 0.83
SREBF1-207ENST00000447641 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
SREBF1-207ENST00000447641 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.23■□□□□ 0.83
SREBF1-207ENST00000447641 PXDNQ92626 1479 aa20.23■□□□□ 0.83
SREBF1-207ENST00000447641 GPRASP1Q5JY77 1395 aa20.22■□□□□ 0.83
SREBF1-207ENST00000447641 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
SREBF1-207ENST00000447641 NGLY1Q96IV0 654 aa20.2■□□□□ 0.82
SREBF1-207ENST00000447641 POGKQ9P215 609 aa20.2■□□□□ 0.82
SREBF1-207ENST00000447641 BCL9LQ86UU0 1499 aa20.18■□□□□ 0.82
SREBF1-207ENST00000447641 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
SREBF1-207ENST00000447641 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
SREBF1-207ENST00000447641 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-207ENST00000447641 USP21Q9UK80 565 aa20.18■□□□□ 0.82
SREBF1-207ENST00000447641 ROCK2O75116 1388 aaKnown RBP20.18■□□□□ 0.82
SREBF1-207ENST00000447641 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
SREBF1-207ENST00000447641 BRWD3Q6RI45 1802 aa20.17■□□□□ 0.82
SREBF1-207ENST00000447641 GLI3P10071 1580 aa20.17■□□□□ 0.82
SREBF1-207ENST00000447641 FMN2Q9NZ56 1722 aa20.16■□□□□ 0.82
SREBF1-207ENST00000447641 TRPC5Q9UL62 973 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-207ENST00000447641 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
SREBF1-207ENST00000447641 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-207ENST00000447641 CENPJQ9HC77 1338 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-207ENST00000447641 USP32Q8NFA0 1604 aa20.11■□□□□ 0.81
SREBF1-207ENST00000447641 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-207ENST00000447641 WASLO00401 505 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-207ENST00000447641 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-207ENST00000447641 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
SREBF1-207ENST00000447641 KIF1AQ12756 1690 aa20.1■□□□□ 0.81
SREBF1-207ENST00000447641 PLCH1Q4KWH8 1693 aa20.09■□□□□ 0.81
SREBF1-207ENST00000447641 SLIT2O94813 1529 aa20.08■□□□□ 0.81
SREBF1-207ENST00000447641 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
SREBF1-207ENST00000447641 ANKARQ7Z5J8 1434 aa20.08■□□□□ 0.8
SREBF1-207ENST00000447641 NPHP3Q7Z494 1330 aa20.07■□□□□ 0.8
SREBF1-207ENST00000447641 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-207ENST00000447641 XPCQ01831 940 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-207ENST00000447641 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
SREBF1-207ENST00000447641 ESCO1Q5FWF5 840 aa20.06■□□□□ 0.8
SREBF1-207ENST00000447641 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
SREBF1-207ENST00000447641 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
SREBF1-207ENST00000447641 PRR36Q9H6K5 1346 aa20.04■□□□□ 0.8
SREBF1-207ENST00000447641 CDK19Q9BWU1 502 aa20.04■□□□□ 0.8
SREBF1-207ENST00000447641 SBNO2Q9Y2G9 1366 aa20.04■□□□□ 0.8
SREBF1-207ENST00000447641 NWD2Q9ULI1 1742 aa20.03■□□□□ 0.8
SREBF1-207ENST00000447641 FOXO3O43524 673 aa20.02■□□□□ 0.8
SREBF1-207ENST00000447641 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-207ENST00000447641 ATP7BP35670 1465 aa20■□□□□ 0.79
SREBF1-207ENST00000447641 NRAPQ86VF7 1730 aa20■□□□□ 0.79
SREBF1-207ENST00000447641 NUDT16Q96DE0 195 aaKnown RBP20■□□□□ 0.79
SREBF1-207ENST00000447641 ZRANB1Q9UGI0 708 aa20■□□□□ 0.79
SREBF1-207ENST00000447641 PHF8Q9UPP1 1060 aa20■□□□□ 0.79
SREBF1-207ENST00000447641 LRP5O75197 1615 aa20■□□□□ 0.79
SREBF1-207ENST00000447641 BLMP54132 1417 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms