RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 IRF2BPLQ9H1B7 796 aa5.27□□□□□ -1.57
UBR3-206ENST00000444475 CFAP69A5D8W1 941 aa5.26□□□□□ -1.57
UBR3-206ENST00000444475 TAGLNQ01995 201 aaKnown RBP5.26□□□□□ -1.57
UBR3-206ENST00000444475 LIG1P18858 919 aa5.26□□□□□ -1.57
UBR3-206ENST00000444475 TBX4P57082 545 aa5.26□□□□□ -1.57
UBR3-206ENST00000444475 RGS20O76081 388 aa5.26□□□□□ -1.57
UBR3-206ENST00000444475 HDLBPQ00341 1268 aaKnown RBP5.26□□□□□ -1.57
UBR3-206ENST00000444475 SOWAHDA6NJG2 315 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 RFC5P40937 340 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 MARSP56192 900 aaKnown RBP5.25□□□□□ -1.57
UBR3-206ENST00000444475 SCYL1Q96KG9 808 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 RFX1P22670 979 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 HSP90AB2PQ58FF8 381 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 COMMD10Q9Y6G5 202 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 ZNF467Q7Z7K2 595 aaPredicted RBP5.25□□□□□ -1.57
UBR3-206ENST00000444475 FTSJ3Q8IY81 847 aaKnown RBP5.25□□□□□ -1.57
UBR3-206ENST00000444475 SLC43A3Q8NBI5 491 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 NRBP1Q9UHY1 535 aa5.25□□□□□ -1.57
UBR3-206ENST00000444475 SH3BP5O60239 455 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 PHF14O94880 888 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 TTLL12Q14166 644 aaPredicted RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 ZNF746Q6NUN9 644 aaPredicted RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 LARP6Q9BRS8 491 aaKnown RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 ANKRD33BA6NCL7 494 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 RHBDL3P58872 404 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 DCAF8Q5TAQ9 597 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 CCER1Q8TC90 406 aaPredicted RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 GPR37L1O60883 481 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 ERCC5P28715 1186 aaPredicted RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 RBL2Q08999 1139 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 MRPL58Q14197 206 aaKnown RBP5.24□□□□□ -1.57
UBR3-206ENST00000444475 CUX2O14529 1486 aa5.24□□□□□ -1.57
UBR3-206ENST00000444475 CCDC96Q2M329 555 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 HDGFL1Q5TGJ6 251 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 PPP2R2DQ66LE6 453 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 XPCQ01831 940 aaPredicted RBP5.23□□□□□ -1.57
UBR3-206ENST00000444475 PDIA6Q15084 440 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 PCGF5Q86SE9 256 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 JAZF1Q86VZ6 243 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 METTL16Q86W50 562 aaKnown RBP5.23□□□□□ -1.57
UBR3-206ENST00000444475 AMOTL1Q8IY63 956 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 UCN2Q96RP3 112 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 GMLQ99445 158 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 SLAIN2Q9P270 581 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 PALM3A6NDB9 673 aaPredicted RBP5.23□□□□□ -1.57
UBR3-206ENST00000444475 SSFA2P28290 1259 aa5.23□□□□□ -1.57
UBR3-206ENST00000444475 FARP1Q9Y4F1 1045 aaPredicted RBP5.23□□□□□ -1.57
UBR3-206ENST00000444475 ELOAQ14241 798 aaKnown RBP5.22□□□□□ -1.57
UBR3-206ENST00000444475 ARHGEF10LQ9HCE6 1279 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 BSDC1Q9NW68 430 aaPredicted RBP5.22□□□□□ -1.57
UBR3-206ENST00000444475 GNPATO15228 680 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 CCDC146Q8IYE0 955 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 DDX27Q96GQ7 796 aaKnown RBP5.22□□□□□ -1.57
UBR3-206ENST00000444475 PCDH12Q9NPG4 1184 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 PRR12Q9ULL5 1215 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 KIF4AO95239 1232 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 TBC1D2BQ9UPU7 963 aa5.22□□□□□ -1.57
UBR3-206ENST00000444475 EPB41L2O43491 1005 aaKnown RBP5.21□□□□□ -1.57
UBR3-206ENST00000444475 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.21□□□□□ -1.57
UBR3-206ENST00000444475 DHX38Q92620 1227 aaKnown RBP5.21□□□□□ -1.57
UBR3-206ENST00000444475 CCDC85AQ96PX6 553 aaPredicted RBP5.21□□□□□ -1.57
UBR3-206ENST00000444475 IGF1RP08069 1367 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 FAM193AP78312 1265 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 ZNF512BQ96KM6 892 aaPredicted RBP5.21□□□□□ -1.58
UBR3-206ENST00000444475 EPAS1Q99814 870 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 ZMIZ1Q9ULJ6 1067 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 B4GALNT3Q6L9W6 998 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 BACH2Q9BYV9 841 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 COL4A3BPQ9Y5P4 624 aa5.21□□□□□ -1.58
UBR3-206ENST00000444475 HSD3B2P26439 372 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 MYSM1Q5VVJ2 828 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 SWAP70Q9UH65 585 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 HOXA2O43364 376 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 TANGO6Q9C0B7 1094 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 PDE4AP27815 886 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 TMEM259Q4ZIN3 620 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 RPS6KC1Q96S38 1066 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 RPGRIP1LQ68CZ1 1315 aa5.2□□□□□ -1.58
UBR3-206ENST00000444475 RB1CC1Q8TDY2 1594 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 ZNF500O60304 480 aaPredicted RBP5.19□□□□□ -1.58
UBR3-206ENST00000444475 MNX1P50219 401 aaPredicted RBP5.19□□□□□ -1.58
UBR3-206ENST00000444475 ALG2Q9H553 416 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 NLRP2Q9NX02 1062 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 FBXO9Q9UK97 447 aaPredicted RBP5.19□□□□□ -1.58
UBR3-206ENST00000444475 FGAP02671 866 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 CCDC184Q52MB2 194 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 DDX56Q9NY93 547 aaKnown RBP5.19□□□□□ -1.58
UBR3-206ENST00000444475 ABL2P42684 1182 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 BMS1Q14692 1282 aaKnown RBP5.19□□□□□ -1.58
UBR3-206ENST00000444475 CDCA8Q53HL2 280 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 FAM212AQ96EL1 285 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 PRKAG2Q9UGJ0 569 aa5.19□□□□□ -1.58
UBR3-206ENST00000444475 ZCRB1Q8TBF4 217 aaKnown RBP5.18□□□□□ -1.58
UBR3-206ENST00000444475 IL17RAQ96F46 866 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 CCDC189A1A4V9 331 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 TSNAXIP1Q2TAA8 658 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 MMP14P50281 582 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 HIC1Q14526 733 aa5.18□□□□□ -1.58
UBR3-206ENST00000444475 TMC2Q8TDI7 906 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms