RNA–Protein interactions for RNA: ENST00000439854.1

SCAND3P1-201, Transcript of SCAN domain containing 3 pseudogene 1, humanhuman

BASIC

Gene SCAND3P1, Length 1,060 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND3P1-201ENST00000439854 SPTLC1O15269 473 aa12.51□□□□□ -0.41
SCAND3P1-201ENST00000439854 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
SCAND3P1-201ENST00000439854 SLC6A16Q9GZN6 736 aa12.51□□□□□ -0.41
SCAND3P1-201ENST00000439854 C6orf229H3BNL8 230 aa12.5□□□□□ -0.41
SCAND3P1-201ENST00000439854 S1PR4O95977 384 aa12.5□□□□□ -0.41
SCAND3P1-201ENST00000439854 GGCXP38435 758 aa12.5□□□□□ -0.41
SCAND3P1-201ENST00000439854 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
SCAND3P1-201ENST00000439854 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
SCAND3P1-201ENST00000439854 GJA5P36382 358 aa12.49□□□□□ -0.41
SCAND3P1-201ENST00000439854 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
SCAND3P1-201ENST00000439854 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
SCAND3P1-201ENST00000439854 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
SCAND3P1-201ENST00000439854 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
SCAND3P1-201ENST00000439854 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
SCAND3P1-201ENST00000439854 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
SCAND3P1-201ENST00000439854 SH3D19Q5HYK7 790 aa12.47□□□□□ -0.41
SCAND3P1-201ENST00000439854 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
SCAND3P1-201ENST00000439854 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
SCAND3P1-201ENST00000439854 ATP1B4Q9UN42 357 aaPredicted RBP12.46□□□□□ -0.41
SCAND3P1-201ENST00000439854 MTMR2Q13614 643 aa12.45□□□□□ -0.42
SCAND3P1-201ENST00000439854 RETREG3Q86VR2 466 aa12.45□□□□□ -0.42
SCAND3P1-201ENST00000439854 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
SCAND3P1-201ENST00000439854 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
SCAND3P1-201ENST00000439854 SKIV2LQ15477 1246 aaKnown RBP12.44□□□□□ -0.42
SCAND3P1-201ENST00000439854 CABLES1Q8TDN4 633 aa12.43□□□□□ -0.42
SCAND3P1-201ENST00000439854 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
SCAND3P1-201ENST00000439854 HRCP23327 699 aa12.42□□□□□ -0.42
SCAND3P1-201ENST00000439854 QPCTQ16769 361 aa12.41□□□□□ -0.42
SCAND3P1-201ENST00000439854 TUSC1Q2TAM9 212 aa12.41□□□□□ -0.42
SCAND3P1-201ENST00000439854 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
SCAND3P1-201ENST00000439854 SPDYE5A6NIY4 337 aa12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 NUTM2DQ5VT03 806 aaPredicted RBP12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 PRR7Q8TB68 274 aa12.4□□□□□ -0.42
SCAND3P1-201ENST00000439854 MMP16P51512 607 aa12.38□□□□□ -0.43
SCAND3P1-201ENST00000439854 ANKLE1Q8NAG6 615 aa12.38□□□□□ -0.43
SCAND3P1-201ENST00000439854 LILRB3O75022 631 aa12.37□□□□□ -0.43
SCAND3P1-201ENST00000439854 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
SCAND3P1-201ENST00000439854 JUNDP17535 347 aa12.37□□□□□ -0.43
SCAND3P1-201ENST00000439854 FCF1Q9Y324 198 aaKnown RBP12.37□□□□□ -0.43
SCAND3P1-201ENST00000439854 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
SCAND3P1-201ENST00000439854 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
SCAND3P1-201ENST00000439854 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
SCAND3P1-201ENST00000439854 TSC1Q92574 1164 aa12.35□□□□□ -0.43
SCAND3P1-201ENST00000439854 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCAND3P1-201ENST00000439854 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
SCAND3P1-201ENST00000439854 RGS20O76081 388 aa12.32□□□□□ -0.44
SCAND3P1-201ENST00000439854 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
SCAND3P1-201ENST00000439854 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
SCAND3P1-201ENST00000439854 PRKD2Q9BZL6 878 aa12.32□□□□□ -0.44
SCAND3P1-201ENST00000439854 FBXO31Q5XUX0 539 aaPredicted RBP12.31□□□□□ -0.44
SCAND3P1-201ENST00000439854 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
SCAND3P1-201ENST00000439854 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
SCAND3P1-201ENST00000439854 SLC19A1P41440 591 aa12.28□□□□□ -0.44
SCAND3P1-201ENST00000439854 PTPRNQ16849 979 aa12.28□□□□□ -0.44
SCAND3P1-201ENST00000439854 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
SCAND3P1-201ENST00000439854 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
SCAND3P1-201ENST00000439854 PPP2R2DQ66LE6 453 aa12.27□□□□□ -0.45
SCAND3P1-201ENST00000439854 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.45
SCAND3P1-201ENST00000439854 CCNYL3P0C7X3 344 aa12.26□□□□□ -0.45
SCAND3P1-201ENST00000439854 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
SCAND3P1-201ENST00000439854 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
SCAND3P1-201ENST00000439854 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
SCAND3P1-201ENST00000439854 ZBTB24O43167 697 aaPredicted RBP12.24□□□□□ -0.45
SCAND3P1-201ENST00000439854 RFC5P40937 340 aa12.23□□□□□ -0.45
SCAND3P1-201ENST00000439854 AP1G2O75843 785 aa12.22□□□□□ -0.45
SCAND3P1-201ENST00000439854 RPIAP49247 311 aa12.22□□□□□ -0.45
SCAND3P1-201ENST00000439854 CTHP32929 405 aa12.21□□□□□ -0.45
SCAND3P1-201ENST00000439854 CTDSPL2Q05D32 466 aa12.21□□□□□ -0.45
SCAND3P1-201ENST00000439854 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
SCAND3P1-201ENST00000439854 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
SCAND3P1-201ENST00000439854 EVA1BQ9NVM1 165 aa12.2□□□□□ -0.46
SCAND3P1-201ENST00000439854 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
SCAND3P1-201ENST00000439854 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
SCAND3P1-201ENST00000439854 MAP10Q9P2G4 905 aa12.18□□□□□ -0.46
SCAND3P1-201ENST00000439854 TRIM32Q13049 653 aa12.17□□□□□ -0.46
SCAND3P1-201ENST00000439854 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
SCAND3P1-201ENST00000439854 UNC93B1Q9H1C4 597 aa12.17□□□□□ -0.46
SCAND3P1-201ENST00000439854 F12P00748 615 aaPredicted RBP12.16□□□□□ -0.46
SCAND3P1-201ENST00000439854 ZNF598Q86UK7 904 aaKnown RBP12.16□□□□□ -0.46
SCAND3P1-201ENST00000439854 LRRN4Q8WUT4 740 aa12.16□□□□□ -0.46
SCAND3P1-201ENST00000439854 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
SCAND3P1-201ENST00000439854 TMEM259Q4ZIN3 620 aa12.15□□□□□ -0.46
SCAND3P1-201ENST00000439854 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
SCAND3P1-201ENST00000439854 FOXC1Q12948 553 aa12.1□□□□□ -0.47
SCAND3P1-201ENST00000439854 LINC01559Q495D7 138 aa12.1□□□□□ -0.47
SCAND3P1-201ENST00000439854 SKOR1P84550 965 aa12.09□□□□□ -0.47
SCAND3P1-201ENST00000439854 BAP1Q92560 729 aa12.09□□□□□ -0.47
SCAND3P1-201ENST00000439854 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
SCAND3P1-201ENST00000439854 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
SCAND3P1-201ENST00000439854 TNFRSF10AO00220 468 aa12.07□□□□□ -0.48
SCAND3P1-201ENST00000439854 WNT7BP56706 349 aa12.07□□□□□ -0.48
SCAND3P1-201ENST00000439854 NR6A1Q15406 480 aa12.07□□□□□ -0.48
SCAND3P1-201ENST00000439854 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
SCAND3P1-201ENST00000439854 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
SCAND3P1-201ENST00000439854 SH3BP2P78314 561 aa12.06□□□□□ -0.48
SCAND3P1-201ENST00000439854 PKD2L1Q9P0L9 805 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms