RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 NEO1Q92859 1461 aa32.52■■■□□ 2.8
LMBR1-209ENST00000434453 NGEFQ8N5V2 710 aa32.51■■■□□ 2.8
LMBR1-209ENST00000434453 CENPQQ7L2Z9 268 aaPredicted RBP32.51■■■□□ 2.79
LMBR1-209ENST00000434453 BCAR3O75815 825 aa32.49■■■□□ 2.79
LMBR1-209ENST00000434453 NBR1Q14596 966 aa32.49■■■□□ 2.79
LMBR1-209ENST00000434453 MORC1Q86VD1 984 aa32.49■■■□□ 2.79
LMBR1-209ENST00000434453 TULP4Q9NRJ4 1543 aa32.48■■■□□ 2.79
LMBR1-209ENST00000434453 NUTM2DQ5VT03 806 aaPredicted RBP32.47■■■□□ 2.79
LMBR1-209ENST00000434453 WWC1Q8IX03 1113 aa32.46■■■□□ 2.79
LMBR1-209ENST00000434453 TNNT2P45379 298 aaPredicted RBP32.46■■■□□ 2.79
LMBR1-209ENST00000434453 RICTORQ6R327 1708 aa32.46■■■□□ 2.79
LMBR1-209ENST00000434453 IQSEC2Q5JU85 1478 aa32.43■■■□□ 2.78
LMBR1-209ENST00000434453 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
LMBR1-209ENST00000434453 MYO5BQ9ULV0 1848 aa32.41■■■□□ 2.78
LMBR1-209ENST00000434453 VGFO15240 615 aaPredicted RBP32.41■■■□□ 2.78
LMBR1-209ENST00000434453 CGNL1Q0VF96 1302 aa32.39■■■□□ 2.78
LMBR1-209ENST00000434453 PUS7Q96PZ0 661 aaKnown RBP32.39■■■□□ 2.78
LMBR1-209ENST00000434453 IDI1Q13907 227 aa32.37■■■□□ 2.77
LMBR1-209ENST00000434453 EVC2Q86UK5 1308 aa32.37■■■□□ 2.77
LMBR1-209ENST00000434453 MTHFSP49914 203 aa32.36■■■□□ 2.77
LMBR1-209ENST00000434453 PHF23Q9BUL5 403 aaPredicted RBP32.36■■■□□ 2.77
LMBR1-209ENST00000434453 ANKRD36BQ8N2N9 1353 aa32.36■■■□□ 2.77
LMBR1-209ENST00000434453 RUNDC1Q96C34 613 aa32.36■■■□□ 2.77
LMBR1-209ENST00000434453 YEATS2Q9ULM3 1422 aa32.35■■■□□ 2.77
LMBR1-209ENST00000434453 DEKP35659 375 aaKnown RBP32.34■■■□□ 2.77
LMBR1-209ENST00000434453 TCP11L2Q8N4U5 519 aa32.33■■■□□ 2.77
LMBR1-209ENST00000434453 BCL11AQ9H165 835 aa32.33■■■□□ 2.77
LMBR1-209ENST00000434453 RRP7AQ9Y3A4 280 aaKnown RBP32.33■■■□□ 2.77
LMBR1-209ENST00000434453 ZFYVE9O95405 1425 aa32.33■■■□□ 2.77
LMBR1-209ENST00000434453 NEUROD2Q15784 382 aa32.31■■■□□ 2.76
LMBR1-209ENST00000434453 CABP2Q9NPB3 220 aa32.31■■■□□ 2.76
LMBR1-209ENST00000434453 PREX1Q8TCU6 1659 aa32.3■■■□□ 2.76
LMBR1-209ENST00000434453 PDE3AQ14432 1141 aa32.29■■■□□ 2.76
LMBR1-209ENST00000434453 C8orf34Q49A92 452 aa32.29■■■□□ 2.76
LMBR1-209ENST00000434453 TMEM131LA2VDJ0 1609 aa32.29■■■□□ 2.76
LMBR1-209ENST00000434453 NSD2O96028 1365 aa32.29■■■□□ 2.76
LMBR1-209ENST00000434453 SAFB2Q14151 953 aaKnown RBP eCLIP32.26■■■□□ 2.75
LMBR1-209ENST00000434453 SLC52A1Q9NWF4 448 aa32.26■■■□□ 2.75
LMBR1-209ENST00000434453 NINLQ9Y2I6 1382 aa32.25■■■□□ 2.75
LMBR1-209ENST00000434453 FAM161AQ3B820 660 aa32.25■■■□□ 2.75
LMBR1-209ENST00000434453 IGHDP01880 384 aa32.24■■■□□ 2.75
LMBR1-209ENST00000434453 WDR63Q8IWG1 891 aa32.23■■■□□ 2.75
LMBR1-209ENST00000434453 PANK1Q8TE04 598 aa32.23■■■□□ 2.75
LMBR1-209ENST00000434453 CFAP53Q96M91 514 aa32.23■■■□□ 2.75
LMBR1-209ENST00000434453 PTPRMP28827 1452 aa32.23■■■□□ 2.75
LMBR1-209ENST00000434453 A0A1W2PP64 1363 aa32.22■■■□□ 2.75
LMBR1-209ENST00000434453 RARSP54136 660 aaKnown RBP32.22■■■□□ 2.75
LMBR1-209ENST00000434453 CCDC27Q2M243 656 aa32.22■■■□□ 2.75
LMBR1-209ENST00000434453 RGS3P49796 1198 aa32.21■■■□□ 2.75
LMBR1-209ENST00000434453 SENP3Q9H4L4 574 aaPredicted RBP32.21■■■□□ 2.75
LMBR1-209ENST00000434453 ADGRB2O60241 1585 aa32.21■■■□□ 2.75
LMBR1-209ENST00000434453 ABCC11Q96J66 1382 aa32.21■■■□□ 2.75
LMBR1-209ENST00000434453 STK26Q9P289 416 aa32.2■■■□□ 2.75
LMBR1-209ENST00000434453 COG6Q9Y2V7 657 aa32.2■■■□□ 2.75
LMBR1-209ENST00000434453 CLUAP1Q96AJ1 413 aa32.18■■■□□ 2.74
LMBR1-209ENST00000434453 DDRGK1Q96HY6 314 aa32.18■■■□□ 2.74
LMBR1-209ENST00000434453 LAS1LQ9Y4W2 734 aaKnown RBP32.18■■■□□ 2.74
LMBR1-209ENST00000434453 CLTCQ00610 1675 aaKnown RBP32.16■■■□□ 2.74
LMBR1-209ENST00000434453 VIRMAQ69YN4 1812 aaKnown RBP32.16■■■□□ 2.74
LMBR1-209ENST00000434453 CANXP27824 592 aaKnown RBP32.15■■■□□ 2.74
LMBR1-209ENST00000434453 RTL5Q5HYW3 569 aaPredicted RBP32.15■■■□□ 2.74
LMBR1-209ENST00000434453 U2AF1L5P0DN76 240 aaPredicted RBP32.14■■■□□ 2.74
LMBR1-209ENST00000434453 U2AF1Q01081 240 aaKnown RBP eCLIP32.14■■■□□ 2.74
LMBR1-209ENST00000434453 NCBP3Q53F19 620 aaKnown RBP32.14■■■□□ 2.74
LMBR1-209ENST00000434453 CD163L1Q9NR16 1453 aa32.14■■■□□ 2.74
LMBR1-209ENST00000434453 FRAT1Q92837 279 aaPredicted RBP32.14■■■□□ 2.73
LMBR1-209ENST00000434453 ANKRD26Q9UPS8 1709 aa32.13■■■□□ 2.73
LMBR1-209ENST00000434453 COL3A1P02461 1466 aaPredicted RBP32.13■■■□□ 2.73
LMBR1-209ENST00000434453 SRPK2P78362 688 aaKnown RBP32.12■■■□□ 2.73
LMBR1-209ENST00000434453 YTHDC2Q9H6S0 1430 aaKnown RBP32.12■■■□□ 2.73
LMBR1-209ENST00000434453 RLBP1P12271 317 aa32.12■■■□□ 2.73
LMBR1-209ENST00000434453 TNNQ9UQP3 1299 aa32.12■■■□□ 2.73
LMBR1-209ENST00000434453 NLRP1Q9C000 1473 aa32.11■■■□□ 2.73
LMBR1-209ENST00000434453 FBXO31Q5XUX0 539 aaPredicted RBP32.11■■■□□ 2.73
LMBR1-209ENST00000434453 PRAM1Q96QH2 718 aa32.1■■■□□ 2.73
LMBR1-209ENST00000434453 GGNBP2Q9H3C7 697 aa32.1■■■□□ 2.73
LMBR1-209ENST00000434453 MINK1Q8N4C8 1332 aaPredicted RBP32.09■■■□□ 2.73
LMBR1-209ENST00000434453 RIMBP3CA6NJZ7 1639 aa32.08■■■□□ 2.73
LMBR1-209ENST00000434453 RIMBP3BA6NNM3 1639 aa32.08■■■□□ 2.73
LMBR1-209ENST00000434453 RIMBP3Q9UFD9 1639 aa32.08■■■□□ 2.73
LMBR1-209ENST00000434453 ATAD2Q6PL18 1390 aa32.08■■■□□ 2.73
LMBR1-209ENST00000434453 ALKQ9UM73 1620 aa32.08■■■□□ 2.73
LMBR1-209ENST00000434453 BCL2L13Q9BXK5 485 aa32.08■■■□□ 2.73
LMBR1-209ENST00000434453 PLEKHF1Q96S99 279 aa32.07■■■□□ 2.72
LMBR1-209ENST00000434453 FYB1O15117 783 aa32.06■■■□□ 2.72
LMBR1-209ENST00000434453 CYB5RLQ6IPT4 315 aa32.06■■■□□ 2.72
LMBR1-209ENST00000434453 MED14O60244 1454 aa32.05■■■□□ 2.72
LMBR1-209ENST00000434453 MYH16Q9H6N6 1097 aa32.04■■■□□ 2.72
LMBR1-209ENST00000434453 NEFMP07197 916 aa32.03■■■□□ 2.72
LMBR1-209ENST00000434453 SLC4A3P48751 1232 aa32.03■■■□□ 2.72
LMBR1-209ENST00000434453 PCDHB15Q9Y5E8 787 aa32.03■■■□□ 2.72
LMBR1-209ENST00000434453 ARHGEF40Q8TER5 1519 aa32.02■■■□□ 2.72
LMBR1-209ENST00000434453 PPM1GO15355 546 aaPredicted RBP32.02■■■□□ 2.72
LMBR1-209ENST00000434453 TERF2IPQ9NYB0 399 aa32.01■■■□□ 2.71
LMBR1-209ENST00000434453 POGKQ9P215 609 aa32.01■■■□□ 2.71
LMBR1-209ENST00000434453 USP35Q9P2H5 1018 aa32■■■□□ 2.71
LMBR1-209ENST00000434453 AAMPQ13685 434 aa31.99■■■□□ 2.71
LMBR1-209ENST00000434453 TRIM35Q9UPQ4 493 aa31.98■■■□□ 2.71
LMBR1-209ENST00000434453 MAPK8IP3Q9UPT6 1336 aa31.98■■■□□ 2.71
LMBR1-209ENST00000434453 U2SURPO15042 1029 aaKnown RBP31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms