RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
XIST-201ENST00000416330 HIC1Q14526 733 aa9.67□□□□□ -0.86
XIST-201ENST00000416330 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
XIST-201ENST00000416330 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
XIST-201ENST00000416330 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
XIST-201ENST00000416330 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
XIST-201ENST00000416330 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
XIST-201ENST00000416330 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
XIST-201ENST00000416330 GPR37O15354 613 aa9.65□□□□□ -0.86
XIST-201ENST00000416330 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
XIST-201ENST00000416330 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
XIST-201ENST00000416330 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
XIST-201ENST00000416330 FCF1Q9Y324 198 aaKnown RBP9.65□□□□□ -0.86
XIST-201ENST00000416330 TTC24A2A3L6 582 aaPredicted RBP9.64□□□□□ -0.87
XIST-201ENST00000416330 WFS1O76024 890 aa9.64□□□□□ -0.87
XIST-201ENST00000416330 FECHP22830 423 aa9.64□□□□□ -0.87
XIST-201ENST00000416330 GNPATO15228 680 aa9.62□□□□□ -0.87
XIST-201ENST00000416330 CDK11BP21127 795 aaKnown RBP9.62□□□□□ -0.87
XIST-201ENST00000416330 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
XIST-201ENST00000416330 CDK11AQ9UQ88 783 aaPredicted RBP9.62□□□□□ -0.87
XIST-201ENST00000416330 AVPP01185 164 aa9.61□□□□□ -0.87
XIST-201ENST00000416330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
XIST-201ENST00000416330 TOR4AQ9NXH8 423 aa9.61□□□□□ -0.87
XIST-201ENST00000416330 GMPR2Q9P2T1 348 aaKnown RBP9.61□□□□□ -0.87
XIST-201ENST00000416330 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
XIST-201ENST00000416330 MORN1Q5T089 497 aa9.6□□□□□ -0.87
XIST-201ENST00000416330 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
XIST-201ENST00000416330 SULF1Q8IWU6 871 aa9.6□□□□□ -0.87
XIST-201ENST00000416330 FUT2Q10981 343 aa9.59□□□□□ -0.87
XIST-201ENST00000416330 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
XIST-201ENST00000416330 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
XIST-201ENST00000416330 DACH1Q9UI36 760 aa9.58□□□□□ -0.88
XIST-201ENST00000416330 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
XIST-201ENST00000416330 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
XIST-201ENST00000416330 SLC27A5Q9Y2P5 690 aa9.57□□□□□ -0.88
XIST-201ENST00000416330 HMGB1P09429 215 aaKnown RBP9.56□□□□□ -0.88
XIST-201ENST00000416330 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
XIST-201ENST00000416330 THAP11Q96EK4 314 aa9.56□□□□□ -0.88
XIST-201ENST00000416330 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
XIST-201ENST00000416330 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
XIST-201ENST00000416330 GCGRP47871 477 aa9.54□□□□□ -0.88
XIST-201ENST00000416330 SNIP1Q8TAD8 396 aaKnown RBP9.54□□□□□ -0.88
XIST-201ENST00000416330 PHOX2BQ99453 314 aa9.54□□□□□ -0.88
XIST-201ENST00000416330 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
XIST-201ENST00000416330 HSP90B1P14625 803 aaKnown RBP9.53□□□□□ -0.88
XIST-201ENST00000416330 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
XIST-201ENST00000416330 Q3C1V9 767 aa9.52□□□□□ -0.89
XIST-201ENST00000416330 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
XIST-201ENST00000416330 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
XIST-201ENST00000416330 WNT7AO00755 349 aa9.51□□□□□ -0.89
XIST-201ENST00000416330 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
XIST-201ENST00000416330 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
XIST-201ENST00000416330 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
XIST-201ENST00000416330 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
XIST-201ENST00000416330 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
XIST-201ENST00000416330 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
XIST-201ENST00000416330 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
XIST-201ENST00000416330 CHMP4AQ9BY43 222 aa9.49□□□□□ -0.89
XIST-201ENST00000416330 WIPF1O43516 503 aa9.48□□□□□ -0.89
XIST-201ENST00000416330 TRIM32Q13049 653 aa9.48□□□□□ -0.89
XIST-201ENST00000416330 KIFC2Q96AC6 838 aa9.48□□□□□ -0.89
XIST-201ENST00000416330 APBB1O00213 710 aa9.47□□□□□ -0.89
XIST-201ENST00000416330 RAD21O60216 631 aa9.47□□□□□ -0.89
XIST-201ENST00000416330 SMPD1P17405 629 aa9.47□□□□□ -0.89
XIST-201ENST00000416330 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
XIST-201ENST00000416330 TERTO14746 1132 aaKnown RBP9.46□□□□□ -0.9
XIST-201ENST00000416330 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.9
XIST-201ENST00000416330 MRGPRX2Q96LB1 330 aa9.46□□□□□ -0.9
XIST-201ENST00000416330 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
XIST-201ENST00000416330 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
XIST-201ENST00000416330 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
XIST-201ENST00000416330 CCDC24Q8N4L8 307 aa9.44□□□□□ -0.9
XIST-201ENST00000416330 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
XIST-201ENST00000416330 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
XIST-201ENST00000416330 J3QL48 77 aa9.43□□□□□ -0.9
XIST-201ENST00000416330 RGS22Q8NE09 1264 aa9.43□□□□□ -0.9
XIST-201ENST00000416330 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
XIST-201ENST00000416330 MMP16P51512 607 aa9.42□□□□□ -0.9
XIST-201ENST00000416330 MAP2K5Q13163 448 aa9.41□□□□□ -0.9
XIST-201ENST00000416330 HPS1Q92902 700 aa9.4□□□□□ -0.9
XIST-201ENST00000416330 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
XIST-201ENST00000416330 MTMR7Q9Y216 660 aa9.39□□□□□ -0.91
XIST-201ENST00000416330 KDM4AO75164 1064 aa9.38□□□□□ -0.91
XIST-201ENST00000416330 CD46P15529 392 aa9.38□□□□□ -0.91
XIST-201ENST00000416330 WNT7BP56706 349 aa9.38□□□□□ -0.91
XIST-201ENST00000416330 HLA-CQ95604 372 aa9.38□□□□□ -0.91
XIST-201ENST00000416330 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
XIST-201ENST00000416330 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
XIST-201ENST00000416330 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
XIST-201ENST00000416330 USP46P62068 366 aa9.36□□□□□ -0.91
XIST-201ENST00000416330 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
XIST-201ENST00000416330 IRF6O14896 467 aa9.35□□□□□ -0.91
XIST-201ENST00000416330 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
XIST-201ENST00000416330 CCDC102AQ96A19 550 aa9.34□□□□□ -0.91
XIST-201ENST00000416330 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
XIST-201ENST00000416330 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
XIST-201ENST00000416330 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
XIST-201ENST00000416330 FOXD4L4Q8WXT5 416 aaPredicted RBP9.33□□□□□ -0.92
XIST-201ENST00000416330 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
XIST-201ENST00000416330 GUCA2AQ02747 115 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms