RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 L3MBTL3Q96JM7 780 aaPredicted RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 RBM42Q9BTD8 480 aaKnown RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 MAGEC2Q9UBF1 373 aaPredicted RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 ZMIZ1Q9ULJ6 1067 aa8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 IBSPP21815 317 aaPredicted RBP8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 ANAPC15P60006 121 aa8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 IFNL1Q8IU54 200 aa8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 REM2Q8IYK8 340 aaPredicted RBP8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 STK32AQ8WU08 396 aa8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 KCNB2Q92953 911 aa8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 SPACA7Q96KW9 195 aa8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 PLCD4Q9BRC7 762 aa8.01□□□□□ -1.13
CBX1P3-201ENST00000413296 PEX14O75381 377 aa8□□□□□ -1.13
CBX1P3-201ENST00000413296 MAP4K4O95819 1239 aaPredicted RBP8□□□□□ -1.13
CBX1P3-201ENST00000413296 SOX11P35716 441 aa8□□□□□ -1.13
CBX1P3-201ENST00000413296 HDLBPQ00341 1268 aaKnown RBP8□□□□□ -1.13
CBX1P3-201ENST00000413296 CCDC144BQ3MJ40 725 aa8□□□□□ -1.13
CBX1P3-201ENST00000413296 PRR7Q8TB68 274 aa8□□□□□ -1.13
CBX1P3-201ENST00000413296 HMGB1P1B2RPK0 211 aaPredicted RBP7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 SCAMP3O14828 347 aaKnown RBP7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 PARNO95453 639 aaKnown RBP7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 FOXK1P85037 733 aa7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 SPTY2D1Q68D10 685 aaPredicted RBP7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 TBC1D9Q6ZT07 1266 aa7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 DHX38Q92620 1227 aaKnown RBP7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 NOVA2Q9UNW9 492 aaKnown RBP7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 TBX22Q9Y458 520 aa7.99□□□□□ -1.13
CBX1P3-201ENST00000413296 SPTLC1O15269 473 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 PSME1Q06323 249 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 CSPP1Q1MSJ5 1256 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 HSP90AB2PQ58FF8 381 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 C9orf131Q5VYM1 1079 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 SMC5Q8IY18 1101 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 BACH2Q9BYV9 841 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 PRKAG2Q9UGJ0 569 aa7.98□□□□□ -1.13
CBX1P3-201ENST00000413296 ATP9BO43861 1147 aa7.97□□□□□ -1.13
CBX1P3-201ENST00000413296 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
CBX1P3-201ENST00000413296 NLRP7Q8WX94 980 aa7.97□□□□□ -1.13
CBX1P3-201ENST00000413296 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
CBX1P3-201ENST00000413296 GPR37L1O60883 481 aa7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 PTMSP20962 102 aa7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 GTF2F1P35269 517 aaKnown RBP eCLIP7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 FGD1P98174 961 aa7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 RALBP1Q15311 655 aa7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 APBB1IPQ7Z5R6 666 aaPredicted RBP7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 SPIRE2Q8WWL2 714 aa7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 BRINP2Q9C0B6 783 aa7.96□□□□□ -1.14
CBX1P3-201ENST00000413296 CCDC194A0A1B0GVG4 234 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 LILRB3O75022 631 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 RAD51AP2Q09MP3 1159 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 RSBN1LQ6PCB5 846 aaPredicted RBP7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 ARMC5Q96C12 935 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 TINF2Q9BSI4 451 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 UBA5Q9GZZ9 404 aa7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 NOP58Q9Y2X3 529 aaKnown RBP7.95□□□□□ -1.14
CBX1P3-201ENST00000413296 LZTS3O60299 673 aaPredicted RBP7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 QPCTQ16769 361 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 PLPP6Q8IY26 295 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 SLC43A3Q8NBI5 491 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 ZCRB1Q8TBF4 217 aaKnown RBP7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 TMC2Q8TDI7 906 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 NPDC1Q9NQX5 325 aaPredicted RBP7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 NLRP2Q9NX02 1062 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 CHPF2Q9P2E5 772 aa7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 IQSEC3Q9UPP2 1182 aaPredicted RBP7.94□□□□□ -1.14
CBX1P3-201ENST00000413296 EIF3JO75822 258 aaKnown RBP7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 OATP04181 439 aa7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 GOLGA2Q08379 1002 aa7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 FAM50AQ14320 339 aaKnown RBP7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 NLGN1Q8N2Q7 840 aa7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 PIF1Q9H611 641 aa7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 CDHR5Q9HBB8 845 aa7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 FAN1Q9Y2M0 1017 aa7.93□□□□□ -1.14
CBX1P3-201ENST00000413296 TCEAL1Q15170 157 aa7.92□□□□□ -1.14
CBX1P3-201ENST00000413296 PMFBP1Q8TBY8 1022 aa7.92□□□□□ -1.14
CBX1P3-201ENST00000413296 PRDM10Q9NQV6 1147 aa7.92□□□□□ -1.14
CBX1P3-201ENST00000413296 LAS1LQ9Y4W2 734 aaKnown RBP7.92□□□□□ -1.14
CBX1P3-201ENST00000413296 CCDC180Q9P1Z9 1646 aa7.92□□□□□ -1.14
CBX1P3-201ENST00000413296 NUTM2BA6NNL0 878 aaPredicted RBP7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 NUTM2EB1AL46 878 aaPredicted RBP7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 MRPL58Q14197 206 aaKnown RBP7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 COL19A1Q14993 1142 aa7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 NUTM2DQ5VT03 806 aaPredicted RBP7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 NUTM2AQ8IVF1 878 aaPredicted RBP7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 CLP1Q92989 425 aaKnown RBP7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 ASB16Q96NS5 453 aa7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 ZSWIM4Q9H7M6 989 aa7.91□□□□□ -1.14
CBX1P3-201ENST00000413296 MAPK1P28482 360 aa7.9□□□□□ -1.14
CBX1P3-201ENST00000413296 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.14
CBX1P3-201ENST00000413296 RNF187Q5TA31 235 aaPredicted RBP7.9□□□□□ -1.14
CBX1P3-201ENST00000413296 NT5DC4Q86YG4 428 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms