RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 RSBN1LQ6PCB5 846 aaPredicted RBP7.8□□□□□ -1.16
RPA3-203ENST00000401447 TRAF7Q6Q0C0 670 aa7.8□□□□□ -1.16
RPA3-203ENST00000401447 SPSB2Q99619 263 aa7.8□□□□□ -1.16
RPA3-203ENST00000401447 SALL2Q9Y467 1007 aaPredicted RBP7.8□□□□□ -1.16
RPA3-203ENST00000401447 GJA5P36382 358 aa7.79□□□□□ -1.16
RPA3-203ENST00000401447 GGCXP38435 758 aa7.79□□□□□ -1.16
RPA3-203ENST00000401447 CLK2P49760 499 aaKnown RBP7.79□□□□□ -1.16
RPA3-203ENST00000401447 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
RPA3-203ENST00000401447 ATP1B4Q9UN42 357 aaPredicted RBP7.79□□□□□ -1.16
RPA3-203ENST00000401447 PLEKHG3A1L390 1219 aa7.78□□□□□ -1.16
RPA3-203ENST00000401447 C6orf229H3BNL8 230 aa7.78□□□□□ -1.16
RPA3-203ENST00000401447 SPTLC1O15269 473 aa7.78□□□□□ -1.16
RPA3-203ENST00000401447 RNF19BQ6ZMZ0 732 aa7.78□□□□□ -1.16
RPA3-203ENST00000401447 RIC3Q7Z5B4 369 aa7.78□□□□□ -1.16
RPA3-203ENST00000401447 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
RPA3-203ENST00000401447 MTMR2Q13614 643 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 BRICD5Q6PL45 260 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 THAP11Q96EK4 314 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 USB1Q9BQ65 265 aaKnown RBP7.76□□□□□ -1.17
RPA3-203ENST00000401447 SLC6A16Q9GZN6 736 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 ZBTB3Q9H5J0 574 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 POLR3EQ9NVU0 708 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 PCDHGC3Q9UN70 934 aa7.76□□□□□ -1.17
RPA3-203ENST00000401447 SPDYE5A6NIY4 337 aa7.75□□□□□ -1.17
RPA3-203ENST00000401447 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
RPA3-203ENST00000401447 MSS51Q4VC12 460 aa7.75□□□□□ -1.17
RPA3-203ENST00000401447 RETREG3Q86VR2 466 aa7.75□□□□□ -1.17
RPA3-203ENST00000401447 EMID1Q96A84 441 aaPredicted RBP7.75□□□□□ -1.17
RPA3-203ENST00000401447 LIMD1Q9UGP4 676 aa7.75□□□□□ -1.17
RPA3-203ENST00000401447 S1PR4O95977 384 aa7.74□□□□□ -1.17
RPA3-203ENST00000401447 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
RPA3-203ENST00000401447 GOPCQ9HD26 462 aa7.74□□□□□ -1.17
RPA3-203ENST00000401447 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
RPA3-203ENST00000401447 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
RPA3-203ENST00000401447 RNF223E7ERA6 249 aa7.73□□□□□ -1.17
RPA3-203ENST00000401447 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
RPA3-203ENST00000401447 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
RPA3-203ENST00000401447 NUTM2AQ8IVF1 878 aaPredicted RBP7.73□□□□□ -1.17
RPA3-203ENST00000401447 SYMPKQ92797 1274 aaKnown RBP7.73□□□□□ -1.17
RPA3-203ENST00000401447 PCMTD1Q96MG8 357 aaPredicted RBP7.73□□□□□ -1.17
RPA3-203ENST00000401447 PDZRN3Q9UPQ7 1066 aa7.73□□□□□ -1.17
RPA3-203ENST00000401447 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
RPA3-203ENST00000401447 PRDM9Q9NQV7 894 aa7.72□□□□□ -1.17
RPA3-203ENST00000401447 PCDHB15Q9Y5E8 787 aa7.72□□□□□ -1.17
RPA3-203ENST00000401447 HRCP23327 699 aa7.71□□□□□ -1.18
RPA3-203ENST00000401447 QPCTQ16769 361 aa7.7□□□□□ -1.18
RPA3-203ENST00000401447 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
RPA3-203ENST00000401447 PRR7Q8TB68 274 aa7.7□□□□□ -1.18
RPA3-203ENST00000401447 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
RPA3-203ENST00000401447 JUNDP17535 347 aa7.69□□□□□ -1.18
RPA3-203ENST00000401447 SLC19A1P41440 591 aa7.69□□□□□ -1.18
RPA3-203ENST00000401447 ANKLE1Q8NAG6 615 aa7.69□□□□□ -1.18
RPA3-203ENST00000401447 HELBQ8NG08 1087 aaPredicted RBP7.69□□□□□ -1.18
RPA3-203ENST00000401447 TSC1Q92574 1164 aa7.69□□□□□ -1.18
RPA3-203ENST00000401447 LILRB3O75022 631 aa7.68□□□□□ -1.18
RPA3-203ENST00000401447 DXOO77932 396 aaKnown RBP7.68□□□□□ -1.18
RPA3-203ENST00000401447 MMP16P51512 607 aa7.68□□□□□ -1.18
RPA3-203ENST00000401447 PROCA1Q8NCQ7 364 aaPredicted RBP7.68□□□□□ -1.18
RPA3-203ENST00000401447 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
RPA3-203ENST00000401447 FCF1Q9Y324 198 aaKnown RBP7.68□□□□□ -1.18
RPA3-203ENST00000401447 SPRYD7Q5W111 196 aa7.67□□□□□ -1.18
RPA3-203ENST00000401447 CFAP99D6REC4 459 aa7.66□□□□□ -1.18
RPA3-203ENST00000401447 PPEF1O14829 653 aaPredicted RBP7.66□□□□□ -1.18
RPA3-203ENST00000401447 DESI1Q6ICB0 168 aa7.66□□□□□ -1.18
RPA3-203ENST00000401447 PRR20EP86478 221 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 PRR20CP86479 221 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 PRR20DP86480 221 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 PRR20BP86481 221 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 PRR20AP86496 221 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 PTPRNQ16849 979 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 ZNF598Q86UK7 904 aaKnown RBP7.65□□□□□ -1.18
RPA3-203ENST00000401447 NUDT12Q9BQG2 462 aa7.65□□□□□ -1.18
RPA3-203ENST00000401447 RTL5Q5HYW3 569 aaPredicted RBP7.64□□□□□ -1.19
RPA3-203ENST00000401447 CCDC24Q8N4L8 307 aa7.64□□□□□ -1.19
RPA3-203ENST00000401447 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
RPA3-203ENST00000401447 PPP2R2DQ66LE6 453 aa7.63□□□□□ -1.19
RPA3-203ENST00000401447 ZNF787Q6DD87 383 aa7.63□□□□□ -1.19
RPA3-203ENST00000401447 ZBTB24O43167 697 aaPredicted RBP7.62□□□□□ -1.19
RPA3-203ENST00000401447 PLA2G2CQ5R387 149 aa7.62□□□□□ -1.19
RPA3-203ENST00000401447 GDF9O60383 454 aa7.61□□□□□ -1.19
RPA3-203ENST00000401447 AP1G2O75843 785 aa7.61□□□□□ -1.19
RPA3-203ENST00000401447 RFC5P40937 340 aa7.61□□□□□ -1.19
RPA3-203ENST00000401447 TMEM132AQ24JP5 1023 aa7.61□□□□□ -1.19
RPA3-203ENST00000401447 DGAT1O75907 488 aa7.6□□□□□ -1.19
RPA3-203ENST00000401447 MYT1Q01538 1121 aa7.6□□□□□ -1.19
RPA3-203ENST00000401447 ZNF697Q5TEC3 545 aa7.6□□□□□ -1.19
RPA3-203ENST00000401447 LYPD8Q6UX82 237 aa7.6□□□□□ -1.19
RPA3-203ENST00000401447 CTHP32929 405 aa7.59□□□□□ -1.19
RPA3-203ENST00000401447 TMEM259Q4ZIN3 620 aa7.59□□□□□ -1.19
RPA3-203ENST00000401447 RPIAP49247 311 aa7.58□□□□□ -1.2
RPA3-203ENST00000401447 PKDCCQ504Y2 493 aa7.58□□□□□ -1.2
RPA3-203ENST00000401447 FBXO31Q5XUX0 539 aaPredicted RBP7.58□□□□□ -1.2
RPA3-203ENST00000401447 PER1O15534 1290 aaPredicted RBP7.57□□□□□ -1.2
RPA3-203ENST00000401447 USP17L8P0C7I0 530 aa7.57□□□□□ -1.2
RPA3-203ENST00000401447 CTDSPL2Q05D32 466 aa7.57□□□□□ -1.2
RPA3-203ENST00000401447 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
RPA3-203ENST00000401447 TRIM32Q13049 653 aa7.57□□□□□ -1.2
RPA3-203ENST00000401447 ZNF775Q96BV0 537 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms