RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
RERE-204ENST00000400908 RAD21O60216 631 aa16.75■□□□□ 0.27
RERE-204ENST00000400908 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
RERE-204ENST00000400908 USP8P40818 1118 aa16.75■□□□□ 0.27
RERE-204ENST00000400908 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
RERE-204ENST00000400908 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
RERE-204ENST00000400908 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
RERE-204ENST00000400908 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
RERE-204ENST00000400908 NOL10Q9BSC4 688 aaKnown RBP16.74■□□□□ 0.27
RERE-204ENST00000400908 EPS15P42566 896 aa16.74■□□□□ 0.27
RERE-204ENST00000400908 ANKRD18AQ8IVF6 992 aa16.74■□□□□ 0.27
RERE-204ENST00000400908 ANKRD50Q9ULJ7 1429 aa16.74■□□□□ 0.27
RERE-204ENST00000400908 MEX3CQ5U5Q3 659 aaKnown RBP16.74■□□□□ 0.27
RERE-204ENST00000400908 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
RERE-204ENST00000400908 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
RERE-204ENST00000400908 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
RERE-204ENST00000400908 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
RERE-204ENST00000400908 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
RERE-204ENST00000400908 PDILTQ8N807 584 aa16.73■□□□□ 0.27
RERE-204ENST00000400908 PANK3Q9H999 370 aa16.73■□□□□ 0.27
RERE-204ENST00000400908 NAT10Q9H0A0 1025 aaKnown RBP16.72■□□□□ 0.27
RERE-204ENST00000400908 CENPQQ7L2Z9 268 aaPredicted RBP16.72■□□□□ 0.27
RERE-204ENST00000400908 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
RERE-204ENST00000400908 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
RERE-204ENST00000400908 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
RERE-204ENST00000400908 PDE4AP27815 886 aa16.72■□□□□ 0.27
RERE-204ENST00000400908 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
RERE-204ENST00000400908 CCDC9Q9Y3X0 531 aaKnown RBP16.72■□□□□ 0.27
RERE-204ENST00000400908 REC8O95072 547 aa16.71■□□□□ 0.27
RERE-204ENST00000400908 ANO2Q9NQ90 1003 aa16.71■□□□□ 0.27
RERE-204ENST00000400908 ERLIN2O94905 339 aa16.71■□□□□ 0.27
RERE-204ENST00000400908 ANKRD45Q5TZF3 282 aa16.71■□□□□ 0.27
RERE-204ENST00000400908 ANKRD62A6NC57 917 aa16.71■□□□□ 0.26
RERE-204ENST00000400908 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
RERE-204ENST00000400908 GOLGA6L10A6NI86 522 aa16.7■□□□□ 0.26
RERE-204ENST00000400908 HECW1Q76N89 1606 aa16.7■□□□□ 0.26
RERE-204ENST00000400908 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
RERE-204ENST00000400908 CCP110O43303 1012 aa16.7■□□□□ 0.26
RERE-204ENST00000400908 EZRP15311 586 aaKnown RBP16.7■□□□□ 0.26
RERE-204ENST00000400908 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
RERE-204ENST00000400908 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
RERE-204ENST00000400908 SEPT7Q16181 437 aaKnown RBP16.7■□□□□ 0.26
RERE-204ENST00000400908 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
RERE-204ENST00000400908 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
RERE-204ENST00000400908 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
RERE-204ENST00000400908 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
RERE-204ENST00000400908 VPS37CA5D8V6 355 aaPredicted RBP16.68■□□□□ 0.26
RERE-204ENST00000400908 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
RERE-204ENST00000400908 SAFBQ15424 915 aaKnown RBP eCLIP16.68■□□□□ 0.26
RERE-204ENST00000400908 ENOX2Q16206 610 aaKnown RBP16.68■□□□□ 0.26
RERE-204ENST00000400908 NUCB2P80303 420 aa16.68■□□□□ 0.26
RERE-204ENST00000400908 TRDNQ13061 729 aa16.68■□□□□ 0.26
RERE-204ENST00000400908 DEF6Q9H4E7 631 aa16.68■□□□□ 0.26
RERE-204ENST00000400908 RNF20Q5VTR2 975 aa16.67■□□□□ 0.26
RERE-204ENST00000400908 SMC3Q9UQE7 1217 aa16.67■□□□□ 0.26
RERE-204ENST00000400908 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
RERE-204ENST00000400908 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
RERE-204ENST00000400908 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
RERE-204ENST00000400908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.267e-6■□□□□ 8.9
RERE-204ENST00000400908 ERICH2A1L162 156 aa16.65■□□□□ 0.26
RERE-204ENST00000400908 CLASRPQ8N2M8 674 aaKnown RBP16.65■□□□□ 0.26
RERE-204ENST00000400908 MIA2Q96PC5 1412 aa16.65■□□□□ 0.26
RERE-204ENST00000400908 MRE11P49959 708 aa16.65■□□□□ 0.26
RERE-204ENST00000400908 CUL7Q14999 1698 aa16.64■□□□□ 0.25
RERE-204ENST00000400908 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
RERE-204ENST00000400908 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
RERE-204ENST00000400908 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
RERE-204ENST00000400908 GIMAP7Q8NHV1 300 aa16.64■□□□□ 0.25
RERE-204ENST00000400908 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
RERE-204ENST00000400908 SUPT6HQ7KZ85 1726 aaKnown RBP16.64■□□□□ 0.25
RERE-204ENST00000400908 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
RERE-204ENST00000400908 EID1Q9Y6B2 187 aa16.63■□□□□ 0.25
RERE-204ENST00000400908 RABEP1Q15276 862 aa16.62■□□□□ 0.25
RERE-204ENST00000400908 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
RERE-204ENST00000400908 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
RERE-204ENST00000400908 KIF7Q2M1P5 1343 aa16.62■□□□□ 0.25
RERE-204ENST00000400908 CDK13Q14004 1512 aaKnown RBP16.62■□□□□ 0.25
RERE-204ENST00000400908 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
RERE-204ENST00000400908 AFAP1Q8N556 730 aa16.61■□□□□ 0.25
RERE-204ENST00000400908 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
RERE-204ENST00000400908 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
RERE-204ENST00000400908 IQGAP2Q13576 1575 aa16.61■□□□□ 0.25
RERE-204ENST00000400908 EIF3JO75822 258 aaKnown RBP16.61■□□□□ 0.25
RERE-204ENST00000400908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.257e-7■■□□□ 11.6
RERE-204ENST00000400908 SYCP1Q15431 976 aa16.6■□□□□ 0.25
RERE-204ENST00000400908 FILIP1LQ4L180 1135 aa16.6■□□□□ 0.25
RERE-204ENST00000400908 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
RERE-204ENST00000400908 BRMS1Q9HCU9 246 aa16.6■□□□□ 0.25
RERE-204ENST00000400908 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
RERE-204ENST00000400908 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
RERE-204ENST00000400908 ERLIN1O75477 346 aa16.59■□□□□ 0.25
RERE-204ENST00000400908 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
RERE-204ENST00000400908 TAX1BP1Q86VP1 789 aa16.59■□□□□ 0.25
RERE-204ENST00000400908 C9orf84Q5VXU9 1444 aa16.59■□□□□ 0.25
RERE-204ENST00000400908 SMC2O95347 1197 aa16.59■□□□□ 0.25
RERE-204ENST00000400908 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.25
RERE-204ENST00000400908 CENPHQ9H3R5 247 aa16.58■□□□□ 0.25
RERE-204ENST00000400908 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
RERE-204ENST00000400908 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.24
RERE-204ENST00000400908 FOSBP53539 338 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms