RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 COL22A1Q8NFW1 1626 aaPredicted RBP10.77□□□□□ -0.68
USP16-204ENST00000399976 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.68
USP16-204ENST00000399976 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
USP16-204ENST00000399976 ROCK2O75116 1388 aaKnown RBP10.77□□□□□ -0.69
USP16-204ENST00000399976 CFAP70Q5T0N1 1121 aa10.77□□□□□ -0.69
USP16-204ENST00000399976 C19orf44Q9H6X5 657 aa10.76□□□□□ -0.69
USP16-204ENST00000399976 MON2Q7Z3U7 1717 aa10.75□□□□□ -0.69
USP16-204ENST00000399976 TRPM3Q9HCF6 1732 aaPredicted RBP10.75□□□□□ -0.69
USP16-204ENST00000399976 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
USP16-204ENST00000399976 NINLQ9Y2I6 1382 aa10.75□□□□□ -0.69
USP16-204ENST00000399976 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
USP16-204ENST00000399976 NRKQ7Z2Y5 1582 aa10.74□□□□□ -0.69
USP16-204ENST00000399976 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
USP16-204ENST00000399976 NBPF8Q3BBV2 869 aa10.74□□□□□ -0.69
USP16-204ENST00000399976 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
USP16-204ENST00000399976 ATP7BP35670 1465 aa10.73□□□□□ -0.69
USP16-204ENST00000399976 PHLPP1O60346 1717 aa10.73□□□□□ -0.69
USP16-204ENST00000399976 MED1Q15648 1581 aaPredicted RBP10.73□□□□□ -0.69
USP16-204ENST00000399976 C1orf167Q5SNV9 1468 aa10.73□□□□□ -0.69
USP16-204ENST00000399976 BCANQ96GW7 911 aa10.73□□□□□ -0.69
USP16-204ENST00000399976 MYOM1P52179 1685 aa10.73□□□□□ -0.69
USP16-204ENST00000399976 NEUROD1Q13562 356 aa10.72□□□□□ -0.69
USP16-204ENST00000399976 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
USP16-204ENST00000399976 ALS2Q96Q42 1657 aa10.72□□□□□ -0.69
USP16-204ENST00000399976 FBXO41Q8TF61 875 aa10.72□□□□□ -0.69
USP16-204ENST00000399976 TOM1O60784 492 aa10.71□□□□□ -0.69
USP16-204ENST00000399976 ZEB1P37275 1124 aaPredicted RBP10.71□□□□□ -0.69
USP16-204ENST00000399976 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
USP16-204ENST00000399976 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
USP16-204ENST00000399976 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
USP16-204ENST00000399976 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
USP16-204ENST00000399976 ABCA3Q99758 1704 aa10.7□□□□□ -0.7
USP16-204ENST00000399976 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
USP16-204ENST00000399976 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
USP16-204ENST00000399976 POLR3AO14802 1390 aaPredicted RBP10.68□□□□□ -0.7
USP16-204ENST00000399976 USP47Q96K76 1375 aa10.68□□□□□ -0.7
USP16-204ENST00000399976 PXDNQ92626 1479 aa10.68□□□□□ -0.7
USP16-204ENST00000399976 NBPF1Q3BBV0 1214 aa10.68□□□□□ -0.7
USP16-204ENST00000399976 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
USP16-204ENST00000399976 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
USP16-204ENST00000399976 PRAM1Q96QH2 718 aa10.67□□□□□ -0.7
USP16-204ENST00000399976 ABCC6O95255 1503 aa10.67□□□□□ -0.7
USP16-204ENST00000399976 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
USP16-204ENST00000399976 ATF3P18847 181 aa10.66□□□□□ -0.7
USP16-204ENST00000399976 CARD11Q9BXL7 1154 aa10.66□□□□□ -0.7
USP16-204ENST00000399976 SBNO1A3KN83 1393 aa10.66□□□□□ -0.7
USP16-204ENST00000399976 EVC2Q86UK5 1308 aa10.66□□□□□ -0.7
USP16-204ENST00000399976 PHRF1Q9P1Y6 1649 aaKnown RBP10.66□□□□□ -0.7
USP16-204ENST00000399976 KIF20BQ96Q89 1820 aa10.65□□□□□ -0.71
USP16-204ENST00000399976 CDCA8Q53HL2 280 aa10.65□□□□□ -0.71
USP16-204ENST00000399976 POGKQ9P215 609 aa10.65□□□□□ -0.71
USP16-204ENST00000399976 TESK2Q96S53 571 aa10.64□□□□□ -0.71
USP16-204ENST00000399976 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
USP16-204ENST00000399976 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
USP16-204ENST00000399976 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
USP16-204ENST00000399976 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
USP16-204ENST00000399976 TRAK1Q9UPV9 953 aa10.63□□□□□ -0.71
USP16-204ENST00000399976 SSH2Q76I76 1423 aa10.63□□□□□ -0.71
USP16-204ENST00000399976 SOS2Q07890 1332 aaPredicted RBP10.62□□□□□ -0.71
USP16-204ENST00000399976 WAPLQ7Z5K2 1190 aa10.62□□□□□ -0.71
USP16-204ENST00000399976 NWD2Q9ULI1 1742 aa10.62□□□□□ -0.71
USP16-204ENST00000399976 EIF4G2P78344 907 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■■□□ 15.2
USP16-204ENST00000399976 STK26Q9P289 416 aa10.61□□□□□ -0.71
USP16-204ENST00000399976 NPHP3Q7Z494 1330 aa10.61□□□□□ -0.71
USP16-204ENST00000399976 CD163L1Q9NR16 1453 aa10.6□□□□□ -0.71
USP16-204ENST00000399976 SLIT3O75094 1523 aa10.6□□□□□ -0.71
USP16-204ENST00000399976 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
USP16-204ENST00000399976 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
USP16-204ENST00000399976 BRINP3Q76B58 766 aa10.6□□□□□ -0.71
USP16-204ENST00000399976 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
USP16-204ENST00000399976 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
USP16-204ENST00000399976 TMF1P82094 1093 aa10.59□□□□□ -0.71
USP16-204ENST00000399976 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
USP16-204ENST00000399976 ARHGEF10O15013 1369 aa10.59□□□□□ -0.71
USP16-204ENST00000399976 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.72
USP16-204ENST00000399976 USP6P35125 1406 aa10.58□□□□□ -0.72
USP16-204ENST00000399976 C14orf37Q86TY3 774 aa10.58□□□□□ -0.72
USP16-204ENST00000399976 CDK19Q9BWU1 502 aa10.58□□□□□ -0.72
USP16-204ENST00000399976 EDC4Q6P2E9 1401 aaKnown RBP10.58□□□□□ -0.72
USP16-204ENST00000399976 JCADQ9P266 1359 aa10.57□□□□□ -0.72
USP16-204ENST00000399976 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
USP16-204ENST00000399976 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
USP16-204ENST00000399976 ANKRD36BQ8N2N9 1353 aa10.57□□□□□ -0.72
USP16-204ENST00000399976 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
USP16-204ENST00000399976 COL14A1Q05707 1796 aaKnown RBP10.57□□□□□ -0.72
USP16-204ENST00000399976 NUDT16Q96DE0 195 aaKnown RBP10.56□□□□□ -0.72
USP16-204ENST00000399976 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
USP16-204ENST00000399976 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
USP16-204ENST00000399976 TTC21AQ8NDW8 1320 aa10.56□□□□□ -0.72
USP16-204ENST00000399976 MINK1Q8N4C8 1332 aaPredicted RBP10.56□□□□□ -0.72
USP16-204ENST00000399976 ST20-MTHFSA0A0A6YYL1 179 aa10.56□□□□□ -0.72
USP16-204ENST00000399976 PSME1Q06323 249 aa10.56□□□□□ -0.72
USP16-204ENST00000399976 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
USP16-204ENST00000399976 NRAPQ86VF7 1730 aa10.55□□□□□ -0.72
USP16-204ENST00000399976 PNPLA6Q8IY17 1366 aa10.54□□□□□ -0.72
USP16-204ENST00000399976 NSD2O96028 1365 aa10.54□□□□□ -0.72
USP16-204ENST00000399976 NPC1L1Q9UHC9 1359 aa10.54□□□□□ -0.72
USP16-204ENST00000399976 PLCH1Q4KWH8 1693 aa10.54□□□□□ -0.72
USP16-204ENST00000399976 LMO7Q8WWI1 1683 aa10.54□□□□□ -0.72
USP16-204ENST00000399976 LRRC59Q96AG4 307 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms