RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 RLBP1P12271 317 aa20.41■□□□□ 0.86
ATP2A3-206ENST00000397043 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
ATP2A3-206ENST00000397043 TSR2Q969E8 191 aaKnown RBP20.4■□□□□ 0.86
ATP2A3-206ENST00000397043 SLKQ9H2G2 1235 aaPredicted RBP20.4■□□□□ 0.86
ATP2A3-206ENST00000397043 SEC24BO95487 1268 aa20.4■□□□□ 0.86
ATP2A3-206ENST00000397043 ABCA6Q8N139 1617 aa20.4■□□□□ 0.86
ATP2A3-206ENST00000397043 FRAT2O75474 233 aaPredicted RBP20.39■□□□□ 0.85
ATP2A3-206ENST00000397043 MYOM1P52179 1685 aa20.39■□□□□ 0.85
ATP2A3-206ENST00000397043 POLR3AO14802 1390 aaPredicted RBP20.39■□□□□ 0.85
ATP2A3-206ENST00000397043 MAP3K4Q9Y6R4 1608 aa20.39■□□□□ 0.85
ATP2A3-206ENST00000397043 EVC2Q86UK5 1308 aa20.38■□□□□ 0.85
ATP2A3-206ENST00000397043 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
ATP2A3-206ENST00000397043 PCDHB15Q9Y5E8 787 aa20.37■□□□□ 0.85
ATP2A3-206ENST00000397043 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
ATP2A3-206ENST00000397043 MINK1Q8N4C8 1332 aaPredicted RBP20.37■□□□□ 0.85
ATP2A3-206ENST00000397043 GSE1Q14687 1217 aa20.36■□□□□ 0.85
ATP2A3-206ENST00000397043 SPRYD3Q8NCJ5 442 aa20.36■□□□□ 0.85
ATP2A3-206ENST00000397043 VGFO15240 615 aaPredicted RBP20.35■□□□□ 0.85
ATP2A3-206ENST00000397043 POGKQ9P215 609 aa20.35■□□□□ 0.85
ATP2A3-206ENST00000397043 MYH16Q9H6N6 1097 aa20.35■□□□□ 0.85
ATP2A3-206ENST00000397043 MYOM2P54296 1465 aa20.34■□□□□ 0.85
ATP2A3-206ENST00000397043 NPATQ14207 1427 aa20.34■□□□□ 0.85
ATP2A3-206ENST00000397043 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
ATP2A3-206ENST00000397043 UPF2Q9HAU5 1272 aaKnown RBP20.34■□□□□ 0.85
ATP2A3-206ENST00000397043 KIF1BO60333 1816 aa20.33■□□□□ 0.85
ATP2A3-206ENST00000397043 MAPK8IP3Q9UPT6 1336 aa20.33■□□□□ 0.85
ATP2A3-206ENST00000397043 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.85
ATP2A3-206ENST00000397043 STAG3Q9UJ98 1225 aa20.33■□□□□ 0.85
ATP2A3-206ENST00000397043 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.84
ATP2A3-206ENST00000397043 INO80Q9ULG1 1556 aaPredicted RBP20.33■□□□□ 0.84
ATP2A3-206ENST00000397043 DEPDC5O75140 1603 aa20.33■□□□□ 0.84
ATP2A3-206ENST00000397043 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
ATP2A3-206ENST00000397043 EFCAB6Q5THR3 1501 aa20.32■□□□□ 0.84
ATP2A3-206ENST00000397043 CD109Q6YHK3 1445 aa20.32■□□□□ 0.84
ATP2A3-206ENST00000397043 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
ATP2A3-206ENST00000397043 ARXQ96QS3 562 aa20.31■□□□□ 0.84
ATP2A3-206ENST00000397043 ITPRIPQ8IWB1 547 aa20.31■□□□□ 0.84
ATP2A3-206ENST00000397043 WDR63Q8IWG1 891 aa20.31■□□□□ 0.84
ATP2A3-206ENST00000397043 ZNF518AQ6AHZ1 1483 aa20.31■□□□□ 0.84
ATP2A3-206ENST00000397043 IDI1Q13907 227 aa20.3■□□□□ 0.84
ATP2A3-206ENST00000397043 ARAP3Q8WWN8 1544 aa20.3■□□□□ 0.84
ATP2A3-206ENST00000397043 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
ATP2A3-206ENST00000397043 RWDD1Q9H446 243 aaPredicted RBP20.3■□□□□ 0.84
ATP2A3-206ENST00000397043 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
ATP2A3-206ENST00000397043 BECN1Q14457 450 aa20.29■□□□□ 0.84
ATP2A3-206ENST00000397043 ZKSCAN2Q63HK3 967 aa20.28■□□□□ 0.84
ATP2A3-206ENST00000397043 VWDEQ8N2E2 1590 aa20.28■□□□□ 0.84
ATP2A3-206ENST00000397043 MROH2AA6NES4 1674 aa20.28■□□□□ 0.84
ATP2A3-206ENST00000397043 SBNO2Q9Y2G9 1366 aa20.28■□□□□ 0.84
ATP2A3-206ENST00000397043 FBLN1P23142 703 aa20.28■□□□□ 0.84
ATP2A3-206ENST00000397043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
ATP2A3-206ENST00000397043 ABCA9Q8IUA7 1624 aa20.27■□□□□ 0.84
ATP2A3-206ENST00000397043 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.84
ATP2A3-206ENST00000397043 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
ATP2A3-206ENST00000397043 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
ATP2A3-206ENST00000397043 RIPK4P57078 832 aa20.24■□□□□ 0.83
ATP2A3-206ENST00000397043 RPGRIP1LQ68CZ1 1315 aa20.24■□□□□ 0.83
ATP2A3-206ENST00000397043 MVPQ14764 893 aaKnown RBP20.24■□□□□ 0.83
ATP2A3-206ENST00000397043 KIAA1210Q9ULL0 1709 aa20.24■□□□□ 0.83
ATP2A3-206ENST00000397043 MFAP1P55081 439 aaKnown RBP20.24■□□□□ 0.83
ATP2A3-206ENST00000397043 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
ATP2A3-206ENST00000397043 NINLQ9Y2I6 1382 aa20.23■□□□□ 0.83
ATP2A3-206ENST00000397043 USP19O94966 1318 aa20.23■□□□□ 0.83
ATP2A3-206ENST00000397043 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
ATP2A3-206ENST00000397043 OSCARQ8IYS5 282 aa20.22■□□□□ 0.83
ATP2A3-206ENST00000397043 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
ATP2A3-206ENST00000397043 TERF2IPQ9NYB0 399 aa20.22■□□□□ 0.83
ATP2A3-206ENST00000397043 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
ATP2A3-206ENST00000397043 A0A1W2PP64 1363 aa20.2■□□□□ 0.83
ATP2A3-206ENST00000397043 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
ATP2A3-206ENST00000397043 NOB1Q9ULX3 412 aaKnown RBP20.2■□□□□ 0.82
ATP2A3-206ENST00000397043 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.82
ATP2A3-206ENST00000397043 TRIM27P14373 513 aa20.2■□□□□ 0.82
ATP2A3-206ENST00000397043 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
ATP2A3-206ENST00000397043 CABP1Q9NZU7 370 aa20.19■□□□□ 0.82
ATP2A3-206ENST00000397043 FYB1O15117 783 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 QRICH2Q9H0J4 1663 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 HMOX1P09601 288 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 MLECQ14165 292 aa20.18■□□□□ 0.82
ATP2A3-206ENST00000397043 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.17■□□□□ 0.82
ATP2A3-206ENST00000397043 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
ATP2A3-206ENST00000397043 TMEM57Q8N5G2 664 aa20.15■□□□□ 0.82
ATP2A3-206ENST00000397043 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
ATP2A3-206ENST00000397043 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
ATP2A3-206ENST00000397043 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
ATP2A3-206ENST00000397043 ADGRB1O14514 1584 aa20.14■□□□□ 0.81
ATP2A3-206ENST00000397043 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.81
ATP2A3-206ENST00000397043 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
ATP2A3-206ENST00000397043 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
ATP2A3-206ENST00000397043 TBC1D2Q9BYX2 928 aa20.13■□□□□ 0.81
ATP2A3-206ENST00000397043 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
ATP2A3-206ENST00000397043 TBC1D32Q96NH3 1257 aa20.11■□□□□ 0.81
ATP2A3-206ENST00000397043 GZF1Q9H116 711 aaPredicted RBP20.11■□□□□ 0.81
ATP2A3-206ENST00000397043 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms