RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
ATP2A1-202ENST00000395503 FBLN1P23142 703 aa14.83□□□□□ -0.03
ATP2A1-202ENST00000395503 POGKQ9P215 609 aa14.83□□□□□ -0.03
ATP2A1-202ENST00000395503 SMC4Q9NTJ3 1288 aa14.83□□□□□ -0.04
ATP2A1-202ENST00000395503 NPC1L1Q9UHC9 1359 aa14.82□□□□□ -0.04
ATP2A1-202ENST00000395503 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
ATP2A1-202ENST00000395503 RAPGEF3O95398 923 aa14.82□□□□□ -0.04
ATP2A1-202ENST00000395503 MFAP1P55081 439 aaKnown RBP14.82□□□□□ -0.04
ATP2A1-202ENST00000395503 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
ATP2A1-202ENST00000395503 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
ATP2A1-202ENST00000395503 MINK1Q8N4C8 1332 aaPredicted RBP14.81□□□□□ -0.04
ATP2A1-202ENST00000395503 MAPK8IP3Q9UPT6 1336 aa14.81□□□□□ -0.04
ATP2A1-202ENST00000395503 RTEL1-TNFRSF6BF6WH68 1400 aa14.81□□□□□ -0.04
ATP2A1-202ENST00000395503 ATP7AQ04656 1500 aa14.81□□□□□ -0.04
ATP2A1-202ENST00000395503 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 BECN1Q14457 450 aa14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 POLR3AO14802 1390 aaPredicted RBP14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 SPHKAPQ2M3C7 1700 aa14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 C14orf93Q9H972 538 aaKnown RBP14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
ATP2A1-202ENST00000395503 RWDD1Q9H446 243 aaPredicted RBP14.79□□□□□ -0.04
ATP2A1-202ENST00000395503 MYOM1P52179 1685 aa14.79□□□□□ -0.04
ATP2A1-202ENST00000395503 MYH16Q9H6N6 1097 aa14.79□□□□□ -0.04
ATP2A1-202ENST00000395503 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
ATP2A1-202ENST00000395503 ZKSCAN2Q63HK3 967 aa14.78□□□□□ -0.04
ATP2A1-202ENST00000395503 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
ATP2A1-202ENST00000395503 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
ATP2A1-202ENST00000395503 EVC2Q86UK5 1308 aa14.77□□□□□ -0.05
ATP2A1-202ENST00000395503 ELL2O00472 640 aaPredicted RBP14.76□□□□□ -0.05
ATP2A1-202ENST00000395503 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
ATP2A1-202ENST00000395503 WDR63Q8IWG1 891 aa14.76□□□□□ -0.05
ATP2A1-202ENST00000395503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.76□□□□□ -0.05
ATP2A1-202ENST00000395503 SSH1Q8WYL5 1049 aa14.76□□□□□ -0.05
ATP2A1-202ENST00000395503 CEP152O94986 1710 aa14.75□□□□□ -0.05
ATP2A1-202ENST00000395503 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
ATP2A1-202ENST00000395503 TBC1D2Q9BYX2 928 aa14.75□□□□□ -0.05
ATP2A1-202ENST00000395503 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
ATP2A1-202ENST00000395503 NGEFQ8N5V2 710 aa14.75□□□□□ -0.05
ATP2A1-202ENST00000395503 RIPK4P57078 832 aa14.74□□□□□ -0.05
ATP2A1-202ENST00000395503 MAP3K4Q9Y6R4 1608 aa14.74□□□□□ -0.05
ATP2A1-202ENST00000395503 TRIM27P14373 513 aa14.74□□□□□ -0.05
ATP2A1-202ENST00000395503 THUMPD2Q9BTF0 503 aaKnown RBP14.74□□□□□ -0.05
ATP2A1-202ENST00000395503 TET3O43151 1660 aa14.74□□□□□ -0.05
ATP2A1-202ENST00000395503 ASXL2Q76L83 1435 aa14.73□□□□□ -0.05
ATP2A1-202ENST00000395503 TMPOP42166 694 aaKnown RBP14.73□□□□□ -0.05
ATP2A1-202ENST00000395503 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
ATP2A1-202ENST00000395503 IDI1Q13907 227 aa14.72□□□□□ -0.05
ATP2A1-202ENST00000395503 NPATQ14207 1427 aa14.72□□□□□ -0.05
ATP2A1-202ENST00000395503 TMEM57Q8N5G2 664 aa14.72□□□□□ -0.05
ATP2A1-202ENST00000395503 PRAM1Q96QH2 718 aa14.72□□□□□ -0.05
ATP2A1-202ENST00000395503 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
ATP2A1-202ENST00000395503 C1orf115Q9H7X2 142 aa14.72□□□□□ -0.05
ATP2A1-202ENST00000395503 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
ATP2A1-202ENST00000395503 HMOX1P09601 288 aa14.71□□□□□ -0.05
ATP2A1-202ENST00000395503 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.05
ATP2A1-202ENST00000395503 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
ATP2A1-202ENST00000395503 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.06
ATP2A1-202ENST00000395503 UHRF1BP1LA0JNW5 1464 aa14.7□□□□□ -0.06
ATP2A1-202ENST00000395503 C22orf23Q9BZE7 217 aa14.7□□□□□ -0.06
ATP2A1-202ENST00000395503 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
ATP2A1-202ENST00000395503 MYOM2P54296 1465 aa14.69□□□□□ -0.06
ATP2A1-202ENST00000395503 PHF23Q9BUL5 403 aaPredicted RBP14.69□□□□□ -0.06
ATP2A1-202ENST00000395503 CABP1Q9NZU7 370 aa14.69□□□□□ -0.06
ATP2A1-202ENST00000395503 MROH2AA6NES4 1674 aa14.68□□□□□ -0.06
ATP2A1-202ENST00000395503 FYB1O15117 783 aa14.68□□□□□ -0.06
ATP2A1-202ENST00000395503 ATF7IPQ6VMQ6 1270 aa14.68□□□□□ -0.06
ATP2A1-202ENST00000395503 FBXO31Q5XUX0 539 aaPredicted RBP14.67□□□□□ -0.06
ATP2A1-202ENST00000395503 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
ATP2A1-202ENST00000395503 NINLQ9Y2I6 1382 aa14.67□□□□□ -0.06
ATP2A1-202ENST00000395503 ZNF518AQ6AHZ1 1483 aa14.67□□□□□ -0.06
ATP2A1-202ENST00000395503 PPRC1Q5VV67 1664 aaKnown RBP14.66□□□□□ -0.06
ATP2A1-202ENST00000395503 EFCAB6Q5THR3 1501 aa14.66□□□□□ -0.06
ATP2A1-202ENST00000395503 DIAPH1O60610 1272 aaKnown RBP14.66□□□□□ -0.06
ATP2A1-202ENST00000395503 KIF1BO60333 1816 aa14.66□□□□□ -0.06
ATP2A1-202ENST00000395503 SBNO2Q9Y2G9 1366 aa14.66□□□□□ -0.06
ATP2A1-202ENST00000395503 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 CCDC27Q2M243 656 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 MROH1Q8NDA8 1641 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 ANKRD36BQ8N2N9 1353 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 INO80Q9ULG1 1556 aaPredicted RBP14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 WAPLQ7Z5K2 1190 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 DEPDC5O75140 1603 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 ANTXR1Q9H6X2 564 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 TERF2IPQ9NYB0 399 aa14.65□□□□□ -0.06
ATP2A1-202ENST00000395503 CD109Q6YHK3 1445 aa14.64□□□□□ -0.07
ATP2A1-202ENST00000395503 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
ATP2A1-202ENST00000395503 PLEKHF1Q96S99 279 aa14.64□□□□□ -0.07
ATP2A1-202ENST00000395503 MLECQ14165 292 aa14.64□□□□□ -0.07
ATP2A1-202ENST00000395503 VWDEQ8N2E2 1590 aa14.64□□□□□ -0.07
ATP2A1-202ENST00000395503 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
ATP2A1-202ENST00000395503 PHACTR3Q96KR7 559 aa14.62□□□□□ -0.07
ATP2A1-202ENST00000395503 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
ATP2A1-202ENST00000395503 HDGFL2Q7Z4V5 671 aaPredicted RBP14.62□□□□□ -0.07
ATP2A1-202ENST00000395503 IQSEC2Q5JU85 1478 aa14.62□□□□□ -0.07
ATP2A1-202ENST00000395503 APBB1O00213 710 aa14.62□□□□□ -0.07
ATP2A1-202ENST00000395503 TSPYL6Q8N831 410 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms