RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
HERC4-203ENST00000395185 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
HERC4-203ENST00000395185 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
HERC4-203ENST00000395185 PTPRUQ92729 1446 aa12.02□□□□□ -0.49
HERC4-203ENST00000395185 NEXMIFQ5QGS0 1516 aa12.01□□□□□ -0.49
HERC4-203ENST00000395185 SETBP1Q9Y6X0 1596 aa12.01□□□□□ -0.49
HERC4-203ENST00000395185 POGKQ9P215 609 aa12□□□□□ -0.49
HERC4-203ENST00000395185 RALGAPBQ86X10 1494 aa12□□□□□ -0.49
HERC4-203ENST00000395185 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
HERC4-203ENST00000395185 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
HERC4-203ENST00000395185 ABCC11Q96J66 1382 aa11.99□□□□□ -0.49
HERC4-203ENST00000395185 KIF1BO60333 1816 aa11.99□□□□□ -0.49
HERC4-203ENST00000395185 PIK3C2GO75747 1445 aa11.98□□□□□ -0.49
HERC4-203ENST00000395185 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
HERC4-203ENST00000395185 WAPLQ7Z5K2 1190 aa11.98□□□□□ -0.49
HERC4-203ENST00000395185 NWD1Q149M9 1564 aa11.96□□□□□ -0.49
HERC4-203ENST00000395185 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.49
HERC4-203ENST00000395185 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.49
HERC4-203ENST00000395185 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
HERC4-203ENST00000395185 MYO5BQ9ULV0 1848 aa11.95□□□□□ -0.5
HERC4-203ENST00000395185 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
HERC4-203ENST00000395185 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
HERC4-203ENST00000395185 DCCP43146 1447 aa11.94□□□□□ -0.5
HERC4-203ENST00000395185 IFT172Q9UG01 1749 aa11.94□□□□□ -0.5
HERC4-203ENST00000395185 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
HERC4-203ENST00000395185 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
HERC4-203ENST00000395185 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
HERC4-203ENST00000395185 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
HERC4-203ENST00000395185 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
HERC4-203ENST00000395185 YTHDC2Q9H6S0 1430 aaKnown RBP11.94□□□□□ -0.5
HERC4-203ENST00000395185 STRCP1A6NGW2 1772 aa11.93□□□□□ -0.5
HERC4-203ENST00000395185 PPLO60437 1756 aa11.93□□□□□ -0.5
HERC4-203ENST00000395185 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
HERC4-203ENST00000395185 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
HERC4-203ENST00000395185 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
HERC4-203ENST00000395185 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
HERC4-203ENST00000395185 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
HERC4-203ENST00000395185 CHD2O14647 1828 aaKnown RBP11.92□□□□□ -0.5
HERC4-203ENST00000395185 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
HERC4-203ENST00000395185 ADGRB1O14514 1584 aa11.91□□□□□ -0.5
HERC4-203ENST00000395185 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
HERC4-203ENST00000395185 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
HERC4-203ENST00000395185 TESK2Q96S53 571 aa11.9□□□□□ -0.5
HERC4-203ENST00000395185 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
HERC4-203ENST00000395185 USP47Q96K76 1375 aa11.9□□□□□ -0.5
HERC4-203ENST00000395185 JCADQ9P266 1359 aa11.9□□□□□ -0.5
HERC4-203ENST00000395185 LAMC1P11047 1609 aa11.89□□□□□ -0.51
HERC4-203ENST00000395185 NRXN3Q9Y4C0 1643 aa11.89□□□□□ -0.51
HERC4-203ENST00000395185 TECPR2O15040 1411 aa11.89□□□□□ -0.51
HERC4-203ENST00000395185 PSME1Q06323 249 aa11.88□□□□□ -0.51
HERC4-203ENST00000395185 MEX3CQ5U5Q3 659 aaKnown RBP11.88□□□□□ -0.51
HERC4-203ENST00000395185 NPHP3Q7Z494 1330 aa11.87□□□□□ -0.51
HERC4-203ENST00000395185 MST1RQ04912 1400 aa11.87□□□□□ -0.51
HERC4-203ENST00000395185 ST20-MTHFSA0A0A6YYL1 179 aa11.87□□□□□ -0.51
HERC4-203ENST00000395185 C11orf95C9JLR9 678 aaPredicted RBP11.87□□□□□ -0.51
HERC4-203ENST00000395185 FOXO3O43524 673 aa11.87□□□□□ -0.51
HERC4-203ENST00000395185 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
HERC4-203ENST00000395185 C1orf167Q5SNV9 1468 aa11.87□□□□□ -0.51
HERC4-203ENST00000395185 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
HERC4-203ENST00000395185 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
HERC4-203ENST00000395185 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
HERC4-203ENST00000395185 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
HERC4-203ENST00000395185 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
HERC4-203ENST00000395185 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 NUTM2BA6NNL0 878 aaPredicted RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 NUTM2EB1AL46 878 aaPredicted RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 NUTM2AQ8IVF1 878 aaPredicted RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 XRN1Q8IZH2 1706 aaKnown RBP11.85□□□□□ -0.51
HERC4-203ENST00000395185 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
HERC4-203ENST00000395185 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
HERC4-203ENST00000395185 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
HERC4-203ENST00000395185 CDK19Q9BWU1 502 aa11.83□□□□□ -0.52
HERC4-203ENST00000395185 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
HERC4-203ENST00000395185 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.52
HERC4-203ENST00000395185 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
HERC4-203ENST00000395185 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
HERC4-203ENST00000395185 CENPJQ9HC77 1338 aaPredicted RBP11.82□□□□□ -0.52
HERC4-203ENST00000395185 SRPK2P78362 688 aaKnown RBP11.81□□□□□ -0.52
HERC4-203ENST00000395185 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
HERC4-203ENST00000395185 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
HERC4-203ENST00000395185 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
HERC4-203ENST00000395185 ROBO1Q9Y6N7 1651 aa11.81□□□□□ -0.52
HERC4-203ENST00000395185 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
HERC4-203ENST00000395185 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
HERC4-203ENST00000395185 SETD1AO15047 1707 aaKnown RBP11.8□□□□□ -0.52
HERC4-203ENST00000395185 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
HERC4-203ENST00000395185 ZNF772Q68DY9 489 aaPredicted RBP11.8□□□□□ -0.52
HERC4-203ENST00000395185 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
HERC4-203ENST00000395185 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
HERC4-203ENST00000395185 XIRP1Q702N8 1843 aaKnown RBP11.8□□□□□ -0.52
HERC4-203ENST00000395185 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
HERC4-203ENST00000395185 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
HERC4-203ENST00000395185 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
HERC4-203ENST00000395185 NGLY1Q96IV0 654 aa11.78□□□□□ -0.52
HERC4-203ENST00000395185 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
HERC4-203ENST00000395185 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
HERC4-203ENST00000395185 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
HERC4-203ENST00000395185 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms