RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
NFKB1-202ENST00000394820 FOXD4L6Q3SYB3 417 aaPredicted RBP16.75■□□□□ 0.27
NFKB1-202ENST00000394820 FOXD4L3Q6VB84 417 aaPredicted RBP16.75■□□□□ 0.27
NFKB1-202ENST00000394820 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
NFKB1-202ENST00000394820 SEC24BO95487 1268 aa16.74■□□□□ 0.27
NFKB1-202ENST00000394820 IGHDP01880 384 aa16.74■□□□□ 0.27
NFKB1-202ENST00000394820 ESF1Q9H501 851 aaKnown RBP16.74■□□□□ 0.27
NFKB1-202ENST00000394820 TCP11L2Q8N4U5 519 aa16.74■□□□□ 0.27
NFKB1-202ENST00000394820 NSD3Q9BZ95 1437 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 FBLN1P23142 703 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 UNC13BO14795 1591 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 IQGAP3Q86VI3 1631 aa16.73■□□□□ 0.27
NFKB1-202ENST00000394820 RTEL1-TNFRSF6BF6WH68 1400 aa16.72■□□□□ 0.27
NFKB1-202ENST00000394820 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
NFKB1-202ENST00000394820 L1TD1Q5T7N2 865 aaKnown RBP16.72■□□□□ 0.27
NFKB1-202ENST00000394820 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
NFKB1-202ENST00000394820 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
NFKB1-202ENST00000394820 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
NFKB1-202ENST00000394820 NOL8Q76FK4 1167 aaKnown RBP16.71■□□□□ 0.27
NFKB1-202ENST00000394820 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
NFKB1-202ENST00000394820 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 TSR2Q969E8 191 aaKnown RBP16.7■□□□□ 0.26
NFKB1-202ENST00000394820 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 E9PSI1 815 aa16.7■□□□□ 0.26
NFKB1-202ENST00000394820 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
NFKB1-202ENST00000394820 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
NFKB1-202ENST00000394820 UHRF1BP1LA0JNW5 1464 aa16.69■□□□□ 0.26
NFKB1-202ENST00000394820 C14orf93Q9H972 538 aaKnown RBP16.69■□□□□ 0.26
NFKB1-202ENST00000394820 EIF2AK4Q9P2K8 1649 aaKnown RBP16.68■□□□□ 0.26
NFKB1-202ENST00000394820 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
NFKB1-202ENST00000394820 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
NFKB1-202ENST00000394820 E9PCH4 1651 aa16.67■□□□□ 0.26
NFKB1-202ENST00000394820 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
NFKB1-202ENST00000394820 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
NFKB1-202ENST00000394820 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
NFKB1-202ENST00000394820 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
NFKB1-202ENST00000394820 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
NFKB1-202ENST00000394820 WAPLQ7Z5K2 1190 aa16.65■□□□□ 0.26
NFKB1-202ENST00000394820 PTPRTO14522 1441 aa16.64■□□□□ 0.26
NFKB1-202ENST00000394820 DNTTIP2Q5QJE6 756 aaKnown RBP16.64■□□□□ 0.25
NFKB1-202ENST00000394820 MPNDQ8N594 471 aa16.64■□□□□ 0.25
NFKB1-202ENST00000394820 PMFBP1Q8TBY8 1022 aa16.64■□□□□ 0.25
NFKB1-202ENST00000394820 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
NFKB1-202ENST00000394820 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
NFKB1-202ENST00000394820 NPATQ14207 1427 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 ZNF518AQ6AHZ1 1483 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 TRPM2O94759 1503 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 BLMP54132 1417 aaPredicted RBP16.63■□□□□ 0.25
NFKB1-202ENST00000394820 PTMAP06454 111 aaKnown RBP16.63■□□□□ 0.25
NFKB1-202ENST00000394820 GOLGA6L22H0YM25 854 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
NFKB1-202ENST00000394820 C22orf23Q9BZE7 217 aa16.62■□□□□ 0.25
NFKB1-202ENST00000394820 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
NFKB1-202ENST00000394820 TRAK2O60296 914 aa16.6■□□□□ 0.25
NFKB1-202ENST00000394820 HMOX1P09601 288 aa16.6■□□□□ 0.25
NFKB1-202ENST00000394820 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
NFKB1-202ENST00000394820 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
NFKB1-202ENST00000394820 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
NFKB1-202ENST00000394820 CDK19Q9BWU1 502 aa16.58■□□□□ 0.25
NFKB1-202ENST00000394820 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
NFKB1-202ENST00000394820 ZKSCAN2Q63HK3 967 aa16.57■□□□□ 0.24
NFKB1-202ENST00000394820 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
NFKB1-202ENST00000394820 ZMYM4Q5VZL5 1548 aa16.57■□□□□ 0.24
NFKB1-202ENST00000394820 TXNDC2Q86VQ3 553 aa16.56■□□□□ 0.24
NFKB1-202ENST00000394820 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
NFKB1-202ENST00000394820 RIPK4P57078 832 aa16.56■□□□□ 0.24
NFKB1-202ENST00000394820 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
NFKB1-202ENST00000394820 MSNP26038 577 aaKnown RBP16.56■□□□□ 0.24
NFKB1-202ENST00000394820 EXOSC9Q06265 439 aaKnown RBP16.56■□□□□ 0.24
NFKB1-202ENST00000394820 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
NFKB1-202ENST00000394820 YEATS2Q9ULM3 1422 aa16.55■□□□□ 0.24
NFKB1-202ENST00000394820 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
NFKB1-202ENST00000394820 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
NFKB1-202ENST00000394820 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
NFKB1-202ENST00000394820 ZNF521Q96K83 1311 aa16.54■□□□□ 0.24
NFKB1-202ENST00000394820 RBM10P98175 930 aaKnown RBP16.54■□□□□ 0.24
NFKB1-202ENST00000394820 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
NFKB1-202ENST00000394820 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
NFKB1-202ENST00000394820 RLBP1P12271 317 aa16.54■□□□□ 0.24
NFKB1-202ENST00000394820 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
NFKB1-202ENST00000394820 SLC52A1Q9NWF4 448 aa16.54■□□□□ 0.24
NFKB1-202ENST00000394820 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
NFKB1-202ENST00000394820 NKTRP30414 1462 aaKnown RBP16.53■□□□□ 0.24
NFKB1-202ENST00000394820 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
NFKB1-202ENST00000394820 CHMP5Q9NZZ3 219 aa16.53■□□□□ 0.24
NFKB1-202ENST00000394820 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
NFKB1-202ENST00000394820 TET3O43151 1660 aa16.52■□□□□ 0.23
NFKB1-202ENST00000394820 MCM4P33991 863 aa16.52■□□□□ 0.23
NFKB1-202ENST00000394820 GBP4Q96PP9 640 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms