RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
TRAV35-201ENST00000390462 NUTM2BA6NNL0 878 aaPredicted RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 NUTM2EB1AL46 878 aaPredicted RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 MARSP56192 900 aaKnown RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 NUTM2AQ8IVF1 878 aaPredicted RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 SLAIN1Q8ND83 568 aa9.43□□□□□ -0.9
TRAV35-201ENST00000390462 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
TRAV35-201ENST00000390462 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
TRAV35-201ENST00000390462 SOWAHDA6NJG2 315 aa9.42□□□□□ -0.9
TRAV35-201ENST00000390462 ZNF326Q5BKZ1 582 aaKnown RBP9.42□□□□□ -0.9
TRAV35-201ENST00000390462 TMEM164Q5U3C3 297 aa9.42□□□□□ -0.9
TRAV35-201ENST00000390462 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
TRAV35-201ENST00000390462 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
TRAV35-201ENST00000390462 PCDHB15Q9Y5E8 787 aa9.42□□□□□ -0.9
TRAV35-201ENST00000390462 SF3A1Q15459 793 aaKnown RBP9.41□□□□□ -0.9
TRAV35-201ENST00000390462 TBC1D9Q6ZT07 1266 aa9.41□□□□□ -0.9
TRAV35-201ENST00000390462 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
TRAV35-201ENST00000390462 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
TRAV35-201ENST00000390462 PADI6Q6TGC4 694 aa9.4□□□□□ -0.9
TRAV35-201ENST00000390462 ZMIZ1Q9ULJ6 1067 aa9.4□□□□□ -0.9
TRAV35-201ENST00000390462 CD46P15529 392 aa9.39□□□□□ -0.91
TRAV35-201ENST00000390462 NDUFV2P19404 249 aa9.39□□□□□ -0.91
TRAV35-201ENST00000390462 BRD2P25440 801 aaKnown RBP9.39□□□□□ -0.91
TRAV35-201ENST00000390462 NAALADL2Q58DX5 795 aa9.39□□□□□ -0.91
TRAV35-201ENST00000390462 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
TRAV35-201ENST00000390462 CABLES1Q8TDN4 633 aa9.39□□□□□ -0.91
TRAV35-201ENST00000390462 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
TRAV35-201ENST00000390462 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
TRAV35-201ENST00000390462 ANKRD33BA6NCL7 494 aa9.38□□□□□ -0.91
TRAV35-201ENST00000390462 ATP9BO43861 1147 aa9.38□□□□□ -0.91
TRAV35-201ENST00000390462 SSFA2P28290 1259 aa9.38□□□□□ -0.91
TRAV35-201ENST00000390462 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
TRAV35-201ENST00000390462 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
TRAV35-201ENST00000390462 NPAS4Q8IUM7 802 aa9.38□□□□□ -0.91
TRAV35-201ENST00000390462 ANKRD62A6NC57 917 aa9.37□□□□□ -0.91
TRAV35-201ENST00000390462 FOSBP53539 338 aa9.37□□□□□ -0.91
TRAV35-201ENST00000390462 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
TRAV35-201ENST00000390462 CERKQ8TCT0 537 aa9.35□□□□□ -0.91
TRAV35-201ENST00000390462 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
TRAV35-201ENST00000390462 CTDSPL2Q05D32 466 aa9.34□□□□□ -0.91
TRAV35-201ENST00000390462 TTC13Q8NBP0 860 aa9.34□□□□□ -0.91
TRAV35-201ENST00000390462 RBM46Q8TBY0 533 aaKnown RBP9.34□□□□□ -0.91
TRAV35-201ENST00000390462 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
TRAV35-201ENST00000390462 BIN2Q9UBW5 565 aaPredicted RBP9.34□□□□□ -0.91
TRAV35-201ENST00000390462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.33□□□□□ -0.92
TRAV35-201ENST00000390462 SERPINB4P48594 390 aa9.33□□□□□ -0.92
TRAV35-201ENST00000390462 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
TRAV35-201ENST00000390462 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
TRAV35-201ENST00000390462 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
TRAV35-201ENST00000390462 HIRIP3Q9BW71 556 aaPredicted RBP9.33□□□□□ -0.92
TRAV35-201ENST00000390462 ARID4BQ4LE39 1312 aaPredicted RBP9.32□□□□□ -0.92
TRAV35-201ENST00000390462 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
TRAV35-201ENST00000390462 RECKO95980 971 aa9.32□□□□□ -0.92
TRAV35-201ENST00000390462 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
TRAV35-201ENST00000390462 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
TRAV35-201ENST00000390462 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
TRAV35-201ENST00000390462 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
TRAV35-201ENST00000390462 RBM27Q9P2N5 1060 aaKnown RBP9.31□□□□□ -0.92
TRAV35-201ENST00000390462 NUDT7P0C024 238 aa9.3□□□□□ -0.92
TRAV35-201ENST00000390462 FBXO33Q7Z6M2 555 aa9.29□□□□□ -0.92
TRAV35-201ENST00000390462 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
TRAV35-201ENST00000390462 HOXB3P14651 431 aaPredicted RBP9.28□□□□□ -0.92
TRAV35-201ENST00000390462 ERCC5P28715 1186 aaPredicted RBP9.28□□□□□ -0.92
TRAV35-201ENST00000390462 EIF4G2P78344 907 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAV35-201ENST00000390462 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
TRAV35-201ENST00000390462 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
TRAV35-201ENST00000390462 CERS3Q8IU89 383 aa9.28□□□□□ -0.92
TRAV35-201ENST00000390462 LRRN4Q8WUT4 740 aa9.28□□□□□ -0.92
TRAV35-201ENST00000390462 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAV35-201ENST00000390462 CLP1Q92989 425 aaKnown RBP9.28□□□□□ -0.92
TRAV35-201ENST00000390462 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
TRAV35-201ENST00000390462 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
TRAV35-201ENST00000390462 DDX11L8A8MPP1 907 aa9.27□□□□□ -0.93
TRAV35-201ENST00000390462 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
TRAV35-201ENST00000390462 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
TRAV35-201ENST00000390462 TAGLNQ01995 201 aaKnown RBP9.27□□□□□ -0.93
TRAV35-201ENST00000390462 PNMA1Q8ND90 353 aa9.27□□□□□ -0.93
TRAV35-201ENST00000390462 HELBQ8NG08 1087 aaPredicted RBP9.27□□□□□ -0.93
TRAV35-201ENST00000390462 TSNAXIP1Q2TAA8 658 aa9.26□□□□□ -0.93
TRAV35-201ENST00000390462 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
TRAV35-201ENST00000390462 EPS8L1Q8TE68 723 aa9.26□□□□□ -0.93
TRAV35-201ENST00000390462 BCL11AQ9H165 835 aa9.26□□□□□ -0.93
TRAV35-201ENST00000390462 FAM196BA6NMK8 535 aa9.25□□□□□ -0.93
TRAV35-201ENST00000390462 KDM4AO75164 1064 aa9.25□□□□□ -0.93
TRAV35-201ENST00000390462 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
TRAV35-201ENST00000390462 PRSS12P56730 875 aa9.25□□□□□ -0.93
TRAV35-201ENST00000390462 FAM69CQ0P6D2 419 aa9.25□□□□□ -0.93
TRAV35-201ENST00000390462 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L21D6R901 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms