RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 PDCL3Q9H2J4 239 aa18.28■□□□□ 0.52
SHROOM2-201ENST00000380913 TRIM5Q9C035 493 aa18.28■□□□□ 0.52
SHROOM2-201ENST00000380913 LEKR1Q6ZMV7 388 aa18.28■□□□□ 0.52
SHROOM2-201ENST00000380913 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.52
SHROOM2-201ENST00000380913 NUP155O75694 1391 aa18.26■□□□□ 0.51
SHROOM2-201ENST00000380913 COG3Q96JB2 828 aa18.26■□□□□ 0.51
SHROOM2-201ENST00000380913 LNPKQ9C0E8 428 aa18.26■□□□□ 0.51
SHROOM2-201ENST00000380913 MAGEC2Q9UBF1 373 aaPredicted RBP18.26■□□□□ 0.51
SHROOM2-201ENST00000380913 SEPT11Q9NVA2 429 aaKnown RBP18.25■□□□□ 0.51
SHROOM2-201ENST00000380913 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
SHROOM2-201ENST00000380913 NAT10Q9H0A0 1025 aaKnown RBP18.24■□□□□ 0.51
SHROOM2-201ENST00000380913 NASPP49321 788 aaPredicted RBP18.23■□□□□ 0.51
SHROOM2-201ENST00000380913 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
SHROOM2-201ENST00000380913 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
SHROOM2-201ENST00000380913 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
SHROOM2-201ENST00000380913 TANGO6Q9C0B7 1094 aa18.22■□□□□ 0.51
SHROOM2-201ENST00000380913 PANK3Q9H999 370 aa18.22■□□□□ 0.51
SHROOM2-201ENST00000380913 GOLGA6L10A6NI86 522 aa18.21■□□□□ 0.51
SHROOM2-201ENST00000380913 TAF3Q5VWG9 929 aa18.21■□□□□ 0.51
SHROOM2-201ENST00000380913 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.51
SHROOM2-201ENST00000380913 CAVIN1Q6NZI2 390 aaKnown RBP18.21■□□□□ 0.51
SHROOM2-201ENST00000380913 CHMP5Q9NZZ3 219 aa18.21■□□□□ 0.51
SHROOM2-201ENST00000380913 KIAA0754O94854 1291 aa18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 NUTM2GQ5VZR2 741 aa18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 DEF6Q9H4E7 631 aa18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 WASHC2CQ9Y4E1 1318 aa18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 XBP1P17861 261 aa18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 MATR3P43243 847 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 SMARCE1Q969G3 411 aa18.2■□□□□ 0.5
SHROOM2-201ENST00000380913 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 ERLIN2O94905 339 aa18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 ERICH4A6NGS2 130 aa18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 CCDC181Q5TID7 509 aa18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 NEBLO76041 1014 aa18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 INTS3Q68E01 1043 aaKnown RBP18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
SHROOM2-201ENST00000380913 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 FILIP1LQ4L180 1135 aa18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 SSR1P43307 286 aaKnown RBP18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 HMGN5P82970 282 aaKnown RBP18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 CHMP4BP1P59074 171 aa18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
SHROOM2-201ENST00000380913 HMOX1P09601 288 aa18.17■□□□□ 0.5
SHROOM2-201ENST00000380913 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
SHROOM2-201ENST00000380913 WDR70Q9NW82 654 aa18.17■□□□□ 0.5
SHROOM2-201ENST00000380913 RBM25P49756 843 aaKnown RBP18.17■□□□□ 0.5
SHROOM2-201ENST00000380913 STK3Q13188 491 aa18.17■□□□□ 0.5
SHROOM2-201ENST00000380913 APAF1O14727 1248 aa18.17■□□□□ 0.5
SHROOM2-201ENST00000380913 NF2P35240 595 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 RIPK4P57078 832 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 GOLGA6L10A0A0M3HER8 536 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 PSME1Q06323 249 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 ANKRD18AQ8IVF6 992 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 PSMD1Q99460 953 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 CCDC66A2RUB6 948 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 SERPINC1P01008 464 aa18.16■□□□□ 0.5
SHROOM2-201ENST00000380913 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
SHROOM2-201ENST00000380913 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
SHROOM2-201ENST00000380913 KINO60870 393 aaKnown RBP18.15■□□□□ 0.5
SHROOM2-201ENST00000380913 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
SHROOM2-201ENST00000380913 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
SHROOM2-201ENST00000380913 TTC16Q8NEE8 873 aa18.14■□□□□ 0.5
SHROOM2-201ENST00000380913 FIBPO43427 364 aa18.14■□□□□ 0.49
SHROOM2-201ENST00000380913 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
SHROOM2-201ENST00000380913 NUCB2P80303 420 aa18.14■□□□□ 0.49
SHROOM2-201ENST00000380913 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
SHROOM2-201ENST00000380913 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
SHROOM2-201ENST00000380913 ERC2O15083 957 aa18.13■□□□□ 0.49
SHROOM2-201ENST00000380913 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
SHROOM2-201ENST00000380913 EEA1Q15075 1411 aa18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 GBP2P32456 591 aaPredicted RBP18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 PRPF40AO75400 957 aaKnown RBP18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 DDX19BQ9UMR2 479 aa18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 E9PSI1 815 aa18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 DZIP1LQ8IYY4 767 aaKnown RBP18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 HSP90AB4PQ58FF6 505 aa18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 TXLNAP40222 546 aa18.12■□□□□ 0.49
SHROOM2-201ENST00000380913 GOLGA6L7A0A1B0GV03 622 aa18.11■□□□□ 0.49
SHROOM2-201ENST00000380913 SSBP05455 408 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHROOM2-201ENST00000380913 TICAM2Q86XR7 235 aa18.11■□□□□ 0.49
SHROOM2-201ENST00000380913 ZNHIT6Q9NWK9 470 aaKnown RBP18.11■□□□□ 0.49
SHROOM2-201ENST00000380913 MAP4K4O95819 1239 aaPredicted RBP18.11■□□□□ 0.49
SHROOM2-201ENST00000380913 CCDC113Q9H0I3 377 aa18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 CCDC112Q8NEF3 446 aa18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 RBM5P52756 815 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 TSPY26PQ9H489 355 aa18.1■□□□□ 0.49
SHROOM2-201ENST00000380913 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
SHROOM2-201ENST00000380913 SART3Q15020 963 aaKnown RBP18.09■□□□□ 0.49
SHROOM2-201ENST00000380913 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.09■□□□□ 0.49
SHROOM2-201ENST00000380913 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.48
SHROOM2-201ENST00000380913 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
SHROOM2-201ENST00000380913 PPFIBP1Q86W92 1011 aa18.08■□□□□ 0.48
SHROOM2-201ENST00000380913 MYBBP1AQ9BQG0 1328 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms