RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
GTF3C4-201ENST00000372146 CLGNO14967 610 aa18.32■□□□□ 0.52
GTF3C4-201ENST00000372146 SPATA24Q86W54 205 aa18.32■□□□□ 0.52
GTF3C4-201ENST00000372146 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
GTF3C4-201ENST00000372146 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
GTF3C4-201ENST00000372146 PDE3BQ13370 1112 aa18.31■□□□□ 0.52
GTF3C4-201ENST00000372146 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
GTF3C4-201ENST00000372146 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
GTF3C4-201ENST00000372146 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
GTF3C4-201ENST00000372146 KINO60870 393 aaKnown RBP18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 GTF2A1P52655 376 aaPredicted RBP18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 C22orf23Q9BZE7 217 aa18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 BCL2L13Q9BXK5 485 aa18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 MAGEC2Q9UBF1 373 aaPredicted RBP18.3■□□□□ 0.52
GTF3C4-201ENST00000372146 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
GTF3C4-201ENST00000372146 AMOTL1Q8IY63 956 aa18.29■□□□□ 0.52
GTF3C4-201ENST00000372146 BBXQ8WY36 941 aaPredicted RBP18.29■□□□□ 0.52
GTF3C4-201ENST00000372146 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
GTF3C4-201ENST00000372146 DHX16O60231 1041 aaKnown RBP18.29■□□□□ 0.52
GTF3C4-201ENST00000372146 FILIP1LQ4L180 1135 aa18.28■□□□□ 0.52
GTF3C4-201ENST00000372146 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.28■□□□□ 0.52
GTF3C4-201ENST00000372146 TRDNQ13061 729 aa18.27■□□□□ 0.52
GTF3C4-201ENST00000372146 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
GTF3C4-201ENST00000372146 SYCP1Q15431 976 aa18.27■□□□□ 0.52
GTF3C4-201ENST00000372146 ERICH2A1L162 156 aa18.27■□□□□ 0.52
GTF3C4-201ENST00000372146 KANK1Q14678 1352 aa18.27■□□□□ 0.51
GTF3C4-201ENST00000372146 TNIKQ9UKE5 1360 aa18.27■□□□□ 0.51
GTF3C4-201ENST00000372146 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
GTF3C4-201ENST00000372146 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
GTF3C4-201ENST00000372146 MPNDQ8N594 471 aa18.26■□□□□ 0.51
GTF3C4-201ENST00000372146 ZNHIT6Q9NWK9 470 aaKnown RBP18.26■□□□□ 0.51
GTF3C4-201ENST00000372146 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
GTF3C4-201ENST00000372146 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
GTF3C4-201ENST00000372146 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
GTF3C4-201ENST00000372146 SERPINC1P01008 464 aa18.25■□□□□ 0.51
GTF3C4-201ENST00000372146 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
GTF3C4-201ENST00000372146 MBD3O95983 291 aa18.24■□□□□ 0.51
GTF3C4-201ENST00000372146 CTDP1Q9Y5B0 961 aaPredicted RBP18.24■□□□□ 0.51
GTF3C4-201ENST00000372146 CCDC91Q7Z6B0 441 aa18.24■□□□□ 0.51
GTF3C4-201ENST00000372146 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
GTF3C4-201ENST00000372146 BRMS1Q9HCU9 246 aa18.24■□□□□ 0.51
GTF3C4-201ENST00000372146 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
GTF3C4-201ENST00000372146 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
GTF3C4-201ENST00000372146 STK26Q9P289 416 aa18.23■□□□□ 0.51
GTF3C4-201ENST00000372146 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
GTF3C4-201ENST00000372146 RNF187Q5TA31 235 aaPredicted RBP18.22■□□□□ 0.51
GTF3C4-201ENST00000372146 PPFIBP1Q86W92 1011 aa18.22■□□□□ 0.51
GTF3C4-201ENST00000372146 FAM107BQ9H098 131 aa18.22■□□□□ 0.51
GTF3C4-201ENST00000372146 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
GTF3C4-201ENST00000372146 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 LUC7LQ9NQ29 371 aaKnown RBP18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 ZKSCAN2Q63HK3 967 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 MNAT1P51948 309 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 PAF1Q8N7H5 531 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 CRACR2AQ9BSW2 395 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 KIF15Q9NS87 1388 aa18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.51
GTF3C4-201ENST00000372146 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
GTF3C4-201ENST00000372146 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
GTF3C4-201ENST00000372146 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
GTF3C4-201ENST00000372146 PDCL3Q9H2J4 239 aa18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 ESPNB1AK53 854 aa18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 POLR3GO15318 223 aaPredicted RBP18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 TXLNBQ8N3L3 684 aa18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 MICALCLQ6ZW33 695 aa18.19■□□□□ 0.5
GTF3C4-201ENST00000372146 TIGD1Q96MW7 591 aa18.18■□□□□ 0.5
GTF3C4-201ENST00000372146 SEPT11Q9NVA2 429 aaKnown RBP18.18■□□□□ 0.5
GTF3C4-201ENST00000372146 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
GTF3C4-201ENST00000372146 CCDC113Q9H0I3 377 aa18.18■□□□□ 0.5
GTF3C4-201ENST00000372146 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
GTF3C4-201ENST00000372146 STAMBPO95630 424 aa18.17■□□□□ 0.5
GTF3C4-201ENST00000372146 CEBPZQ03701 1054 aaKnown RBP18.17■□□□□ 0.5
GTF3C4-201ENST00000372146 GTF2F1P35269 517 aaKnown RBP eCLIP18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 FOXD1Q16676 465 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 FIBPO43427 364 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 MAP9Q49MG5 647 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 UBXN4Q92575 508 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 TNMDQ9H2S6 317 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 KDM4AO75164 1064 aa18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
GTF3C4-201ENST00000372146 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
GTF3C4-201ENST00000372146 C9orf78Q9NZ63 289 aaPredicted RBP18.15■□□□□ 0.5
GTF3C4-201ENST00000372146 LUZP1Q86V48 1076 aa18.15■□□□□ 0.5
GTF3C4-201ENST00000372146 ARHGAP35Q9NRY4 1499 aa18.15■□□□□ 0.5
GTF3C4-201ENST00000372146 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
GTF3C4-201ENST00000372146 DNAAF4Q8WXU2 420 aa18.14■□□□□ 0.5
GTF3C4-201ENST00000372146 XBP1P17861 261 aa18.14■□□□□ 0.49
GTF3C4-201ENST00000372146 SEPT6Q14141 434 aa18.13■□□□□ 0.49
GTF3C4-201ENST00000372146 CDK5RAP3Q96JB5 506 aa18.13■□□□□ 0.49
GTF3C4-201ENST00000372146 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms