RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
SCAF8-201ENST00000367178 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
SCAF8-201ENST00000367178 ATP6V1DQ9Y5K8 247 aa20.24■□□□□ 0.83
SCAF8-201ENST00000367178 PHF14O94880 888 aa20.24■□□□□ 0.83
SCAF8-201ENST00000367178 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
SCAF8-201ENST00000367178 ANO2Q9NQ90 1003 aa20.23■□□□□ 0.83
SCAF8-201ENST00000367178 SUPT6HQ7KZ85 1726 aaKnown RBP20.23■□□□□ 0.83
SCAF8-201ENST00000367178 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SCAF8-201ENST00000367178 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
SCAF8-201ENST00000367178 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
SCAF8-201ENST00000367178 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
SCAF8-201ENST00000367178 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
SCAF8-201ENST00000367178 ANKRD30BQ9BXX2 1392 aa20.22■□□□□ 0.83
SCAF8-201ENST00000367178 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
SCAF8-201ENST00000367178 SYNE3Q6ZMZ3 975 aa20.21■□□□□ 0.83
SCAF8-201ENST00000367178 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
SCAF8-201ENST00000367178 IQGAP2Q13576 1575 aa20.21■□□□□ 0.83
SCAF8-201ENST00000367178 UBTFL1P0CB47 393 aaPredicted RBP20.21■□□□□ 0.83
SCAF8-201ENST00000367178 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
SCAF8-201ENST00000367178 NAIPQ13075 1403 aa20.21■□□□□ 0.83
SCAF8-201ENST00000367178 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
SCAF8-201ENST00000367178 MARCH6O60337 910 aa20.2■□□□□ 0.82
SCAF8-201ENST00000367178 FOXD4L6Q3SYB3 417 aaPredicted RBP20.2■□□□□ 0.82
SCAF8-201ENST00000367178 FOXD4L3Q6VB84 417 aaPredicted RBP20.2■□□□□ 0.82
SCAF8-201ENST00000367178 SLC26A8Q96RN1 970 aa20.2■□□□□ 0.82
SCAF8-201ENST00000367178 APPP05067 770 aa20.2■□□□□ 0.82
SCAF8-201ENST00000367178 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
SCAF8-201ENST00000367178 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
SCAF8-201ENST00000367178 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
SCAF8-201ENST00000367178 VPS37DQ86XT2 251 aa20.19■□□□□ 0.82
SCAF8-201ENST00000367178 NOL10Q9BSC4 688 aaKnown RBP20.19■□□□□ 0.82
SCAF8-201ENST00000367178 INTS3Q68E01 1043 aaKnown RBP20.19■□□□□ 0.82
SCAF8-201ENST00000367178 USP35Q9P2H5 1018 aa20.19■□□□□ 0.82
SCAF8-201ENST00000367178 ERC2O15083 957 aa20.18■□□□□ 0.82
SCAF8-201ENST00000367178 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
SCAF8-201ENST00000367178 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.18■□□□□ 0.82
SCAF8-201ENST00000367178 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
SCAF8-201ENST00000367178 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
SCAF8-201ENST00000367178 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
SCAF8-201ENST00000367178 SULT6B1Q6IMI4 303 aa20.17■□□□□ 0.82
SCAF8-201ENST00000367178 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
SCAF8-201ENST00000367178 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
SCAF8-201ENST00000367178 AMOTL1Q8IY63 956 aa20.16■□□□□ 0.82
SCAF8-201ENST00000367178 GNAI3P08754 354 aa20.16■□□□□ 0.82
SCAF8-201ENST00000367178 TWISTNBQ3B726 338 aaPredicted RBP20.16■□□□□ 0.82
SCAF8-201ENST00000367178 CREBRFQ8IUR6 639 aa20.16■□□□□ 0.82
SCAF8-201ENST00000367178 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
SCAF8-201ENST00000367178 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
SCAF8-201ENST00000367178 TRDNQ13061 729 aa20.15■□□□□ 0.82
SCAF8-201ENST00000367178 ANKLE2Q86XL3 938 aa20.15■□□□□ 0.82
SCAF8-201ENST00000367178 NEUROD6Q96NK8 337 aa20.15■□□□□ 0.82
SCAF8-201ENST00000367178 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.82
SCAF8-201ENST00000367178 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.82
SCAF8-201ENST00000367178 CPLX1O14810 134 aa20.14■□□□□ 0.81
SCAF8-201ENST00000367178 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
SCAF8-201ENST00000367178 ATAD2Q6PL18 1390 aa20.13■□□□□ 0.81
SCAF8-201ENST00000367178 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
SCAF8-201ENST00000367178 POGZQ7Z3K3 1410 aa20.12■□□□□ 0.81
SCAF8-201ENST00000367178 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
SCAF8-201ENST00000367178 PCF11O94913 1555 aaKnown RBP20.11■□□□□ 0.81
SCAF8-201ENST00000367178 TATP17735 454 aaPredicted RBP20.11■□□□□ 0.81
SCAF8-201ENST00000367178 C22orf23Q9BZE7 217 aa20.11■□□□□ 0.81
SCAF8-201ENST00000367178 TRIM29Q14134 588 aa20.11■□□□□ 0.81
SCAF8-201ENST00000367178 CLASRPQ8N2M8 674 aaKnown RBP20.1■□□□□ 0.81
SCAF8-201ENST00000367178 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
SCAF8-201ENST00000367178 SURF6O75683 361 aaKnown RBP20.1■□□□□ 0.81
SCAF8-201ENST00000367178 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
SCAF8-201ENST00000367178 PDE3AQ14432 1141 aa20.1■□□□□ 0.81
SCAF8-201ENST00000367178 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
SCAF8-201ENST00000367178 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
SCAF8-201ENST00000367178 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
SCAF8-201ENST00000367178 STRN4Q9NRL3 753 aa20.1■□□□□ 0.81
SCAF8-201ENST00000367178 CDC45O75419 566 aa20.09■□□□□ 0.81
SCAF8-201ENST00000367178 CUL7Q14999 1698 aa20.08■□□□□ 0.81
SCAF8-201ENST00000367178 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
SCAF8-201ENST00000367178 TRIM34Q9BYJ4 488 aa20.08■□□□□ 0.8
SCAF8-201ENST00000367178 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
SCAF8-201ENST00000367178 BECN2A8MW95 431 aa20.07■□□□□ 0.8
SCAF8-201ENST00000367178 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
SCAF8-201ENST00000367178 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
SCAF8-201ENST00000367178 RAD21O60216 631 aa20.07■□□□□ 0.8
SCAF8-201ENST00000367178 CCDC61Q9Y6R9 512 aa20.07■□□□□ 0.8
SCAF8-201ENST00000367178 ABCC5O15440 1437 aa20.06■□□□□ 0.8
SCAF8-201ENST00000367178 WDR63Q8IWG1 891 aa20.06■□□□□ 0.8
SCAF8-201ENST00000367178 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
SCAF8-201ENST00000367178 GOLGA6L19H0YKK7 550 aa20.06■□□□□ 0.8
SCAF8-201ENST00000367178 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
SCAF8-201ENST00000367178 WASHC4Q2M389 1173 aa20.06■□□□□ 0.8
SCAF8-201ENST00000367178 BCAR3O75815 825 aa20.06■□□□□ 0.8
SCAF8-201ENST00000367178 NOB1Q9ULX3 412 aaKnown RBP20.05■□□□□ 0.8
SCAF8-201ENST00000367178 SMC3Q9UQE7 1217 aa20.05■□□□□ 0.8
SCAF8-201ENST00000367178 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
SCAF8-201ENST00000367178 NFXL1Q6ZNB6 911 aa20.05■□□□□ 0.8
SCAF8-201ENST00000367178 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
SCAF8-201ENST00000367178 VPS37CA5D8V6 355 aaPredicted RBP20.05■□□□□ 0.8
SCAF8-201ENST00000367178 TPD52L1Q16890 204 aaPredicted RBP20.05■□□□□ 0.8
SCAF8-201ENST00000367178 FBXW7Q969H0 707 aa20.05■□□□□ 0.8
SCAF8-201ENST00000367178 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
SCAF8-201ENST00000367178 PES1O00541 588 aaKnown RBP20.04■□□□□ 0.8
SCAF8-201ENST00000367178 RALYLQ86SE5 291 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms