RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
APAF1-203ENST00000359972 PDCL3Q9H2J4 239 aa18.16■□□□□ 0.5
APAF1-203ENST00000359972 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.16■□□□□ 0.5
APAF1-203ENST00000359972 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
APAF1-203ENST00000359972 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
APAF1-203ENST00000359972 ERLIN1O75477 346 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 SMARCE1Q969G3 411 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 FIBPO43427 364 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 CSB-PGBD3P0DP91 1061 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 LRRCC1Q9C099 1032 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
APAF1-203ENST00000359972 PANK3Q9H999 370 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 CEBPZQ03701 1054 aaKnown RBP18.15■□□□□ 0.5
APAF1-203ENST00000359972 ARHGAP35Q9NRY4 1499 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 SPDYE4A6NLX3 237 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
APAF1-203ENST00000359972 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
APAF1-203ENST00000359972 KANK1Q14678 1352 aa18.14■□□□□ 0.5
APAF1-203ENST00000359972 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
APAF1-203ENST00000359972 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.14■□□□□ 0.49
APAF1-203ENST00000359972 CALCOCO1Q9P1Z2 691 aa18.14■□□□□ 0.49
APAF1-203ENST00000359972 IFIT2P09913 472 aaKnown RBP18.14■□□□□ 0.49
APAF1-203ENST00000359972 APAF1O14727 1248 aa18.13■□□□□ 0.49
APAF1-203ENST00000359972 POLR3GO15318 223 aaPredicted RBP18.13■□□□□ 0.49
APAF1-203ENST00000359972 SERPINC1P01008 464 aa18.12■□□□□ 0.49
APAF1-203ENST00000359972 CDC45O75419 566 aa18.12■□□□□ 0.49
APAF1-203ENST00000359972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.497e-6■■■■□ 19.6
APAF1-203ENST00000359972 MSH5O43196 834 aa18.12■□□□□ 0.49
APAF1-203ENST00000359972 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
APAF1-203ENST00000359972 TCEAL9Q9UHQ7 104 aa18.12■□□□□ 0.49
APAF1-203ENST00000359972 KINO60870 393 aaKnown RBP18.11■□□□□ 0.49
APAF1-203ENST00000359972 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
APAF1-203ENST00000359972 PPP4R3BQ5MIZ7 849 aa18.11■□□□□ 0.49
APAF1-203ENST00000359972 CCDC181Q5TID7 509 aa18.11■□□□□ 0.49
APAF1-203ENST00000359972 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
APAF1-203ENST00000359972 ZSCAN30Q86W11 494 aa18.1■□□□□ 0.49
APAF1-203ENST00000359972 G3V3G9 751 aa18.1■□□□□ 0.49
APAF1-203ENST00000359972 ERLIN2O94905 339 aa18.1■□□□□ 0.49
APAF1-203ENST00000359972 SEPT7Q16181 437 aaKnown RBP18.1■□□□□ 0.49
APAF1-203ENST00000359972 DCAF8Q5TAQ9 597 aa18.1■□□□□ 0.49
APAF1-203ENST00000359972 EIF3AQ14152 1382 aaKnown RBP18.1■□□□□ 0.49
APAF1-203ENST00000359972 LTV1Q96GA3 475 aaPredicted RBP18.1■□□□□ 0.49
APAF1-203ENST00000359972 FILIP1LQ4L180 1135 aa18.09■□□□□ 0.49
APAF1-203ENST00000359972 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
APAF1-203ENST00000359972 CCDC192P0DO97 292 aa18.09■□□□□ 0.49
APAF1-203ENST00000359972 GTF2A1P52655 376 aaPredicted RBP18.09■□□□□ 0.49
APAF1-203ENST00000359972 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.49
APAF1-203ENST00000359972 SAFBQ15424 915 aaKnown RBP eCLIP18.08■□□□□ 0.48
APAF1-203ENST00000359972 TMCO3Q6UWJ1 677 aa18.08■□□□□ 0.48
APAF1-203ENST00000359972 TRDNQ13061 729 aa18.08■□□□□ 0.48
APAF1-203ENST00000359972 SHTN1A0MZ66 631 aa18.08■□□□□ 0.48
APAF1-203ENST00000359972 TNMDQ9H2S6 317 aa18.08■□□□□ 0.48
APAF1-203ENST00000359972 PLCD3Q8N3E9 789 aa18.07■□□□□ 0.48
APAF1-203ENST00000359972 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
APAF1-203ENST00000359972 NEK4P51957 841 aa18.06■□□□□ 0.48
APAF1-203ENST00000359972 IRX3P78415 501 aaPredicted RBP18.06■□□□□ 0.48
APAF1-203ENST00000359972 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
APAF1-203ENST00000359972 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
APAF1-203ENST00000359972 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
APAF1-203ENST00000359972 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
APAF1-203ENST00000359972 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
APAF1-203ENST00000359972 RNF187Q5TA31 235 aaPredicted RBP18.05■□□□□ 0.48
APAF1-203ENST00000359972 MAGEC2Q9UBF1 373 aaPredicted RBP18.05■□□□□ 0.48
APAF1-203ENST00000359972 UBXN4Q92575 508 aa18.04■□□□□ 0.48
APAF1-203ENST00000359972 ERICH2A1L162 156 aa18.04■□□□□ 0.48
APAF1-203ENST00000359972 PPFIBP1Q86W92 1011 aa18.04■□□□□ 0.48
APAF1-203ENST00000359972 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
APAF1-203ENST00000359972 C9orf78Q9NZ63 289 aaPredicted RBP18.04■□□□□ 0.48
APAF1-203ENST00000359972 ST20-MTHFSA0A0A6YYL1 179 aa18.03■□□□□ 0.48
APAF1-203ENST00000359972 MCM4P33991 863 aa18.03■□□□□ 0.48
APAF1-203ENST00000359972 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
APAF1-203ENST00000359972 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
APAF1-203ENST00000359972 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
APAF1-203ENST00000359972 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
APAF1-203ENST00000359972 DDX11Q96FC9 970 aa18.02■□□□□ 0.48
APAF1-203ENST00000359972 ATP2B1P20020 1258 aa18.02■□□□□ 0.48
APAF1-203ENST00000359972 FILIP1Q7Z7B0 1213 aa18.02■□□□□ 0.48
APAF1-203ENST00000359972 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
APAF1-203ENST00000359972 CFAP45Q9UL16 551 aa18.02■□□□□ 0.47
APAF1-203ENST00000359972 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
APAF1-203ENST00000359972 SYCE3A1L190 88 aa18.01■□□□□ 0.47
APAF1-203ENST00000359972 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
APAF1-203ENST00000359972 LRRFIP1Q32MZ4 808 aaKnown RBP18.01■□□□□ 0.47
APAF1-203ENST00000359972 NUP155O75694 1391 aa18.01■□□□□ 0.47
APAF1-203ENST00000359972 AMPHP49418 695 aa18.01■□□□□ 0.47
APAF1-203ENST00000359972 MLECQ14165 292 aa18.01■□□□□ 0.47
APAF1-203ENST00000359972 TIGD1Q96MW7 591 aa18■□□□□ 0.47
APAF1-203ENST00000359972 NF2P35240 595 aa18■□□□□ 0.47
APAF1-203ENST00000359972 ZNHIT6Q9NWK9 470 aaKnown RBP18■□□□□ 0.47
APAF1-203ENST00000359972 RABEP1Q15276 862 aa18■□□□□ 0.47
APAF1-203ENST00000359972 MAP2K1Q02750 393 aaPredicted RBP17.99■□□□□ 0.47
APAF1-203ENST00000359972 K7ELQ4 463 aaPredicted RBP17.99■□□□□ 0.47
APAF1-203ENST00000359972 SRRTQ9BXP5 876 aaKnown RBP17.99■□□□□ 0.47
APAF1-203ENST00000359972 KIF7Q2M1P5 1343 aa17.99■□□□□ 0.47
APAF1-203ENST00000359972 TMX1Q9H3N1 280 aa17.99■□□□□ 0.47
APAF1-203ENST00000359972 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
APAF1-203ENST00000359972 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
APAF1-203ENST00000359972 PSMA5P28066 241 aa17.98■□□□□ 0.47
APAF1-203ENST00000359972 CRACR2AQ9BSW2 395 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms