RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 GOLGA6L7A0A1B0GV03 622 aa13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 KIF3BO15066 747 aa13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 ZSCAN29Q8IWY8 852 aaPredicted RBP13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 PPM1EQ8WY54 764 aa13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 FEZ1Q99689 392 aa13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 DYDC1Q8WWB3 177 aa13.81□□□□□ -0.2
NUDCD3-202ENST00000355451 RFX1P22670 979 aa13.81□□□□□ -0.2
NUDCD3-202ENST00000355451 ERCC4Q92889 916 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-202ENST00000355451 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-202ENST00000355451 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-202ENST00000355451 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
NUDCD3-202ENST00000355451 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
NUDCD3-202ENST00000355451 WDR78Q5VTH9 848 aa13.8□□□□□ -0.2
NUDCD3-202ENST00000355451 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-202ENST00000355451 ZWINTO95229 277 aa13.8□□□□□ -0.2
NUDCD3-202ENST00000355451 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-202ENST00000355451 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 SMARCE1Q969G3 411 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 CEP63Q96MT8 703 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 CGNL1Q0VF96 1302 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 TTC16Q8NEE8 873 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
NUDCD3-202ENST00000355451 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 CCDC91Q7Z6B0 441 aa13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 COG3Q96JB2 828 aa13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 LRSAM1Q6UWE0 723 aa13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
NUDCD3-202ENST00000355451 UQCRHLA0A096LP55 91 aa13.77□□□□□ -0.2
NUDCD3-202ENST00000355451 RIC3Q7Z5B4 369 aa13.77□□□□□ -0.2
NUDCD3-202ENST00000355451 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-202ENST00000355451 ZNF76P36508 570 aa13.77□□□□□ -0.21
NUDCD3-202ENST00000355451 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
NUDCD3-202ENST00000355451 TANGO6Q9C0B7 1094 aa13.77□□□□□ -0.21
NUDCD3-202ENST00000355451 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
NUDCD3-202ENST00000355451 GRM1Q13255 1194 aa13.77□□□□□ -0.21
NUDCD3-202ENST00000355451 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 DEF6Q9H4E7 631 aa13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 C16orf71Q8IYS4 520 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 POTEJP0CG39 1038 aa13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 CWC15Q9P013 229 aaKnown RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 NUTM2AQ8IVF1 878 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 CCDC146Q8IYE0 955 aa13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
NUDCD3-202ENST00000355451 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
NUDCD3-202ENST00000355451 GOLGA6L10A0A0M3HER8 536 aa13.75□□□□□ -0.21
NUDCD3-202ENST00000355451 EPB41L2O43491 1005 aaKnown RBP13.75□□□□□ -0.21
NUDCD3-202ENST00000355451 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-202ENST00000355451 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
NUDCD3-202ENST00000355451 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
NUDCD3-202ENST00000355451 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-202ENST00000355451 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
NUDCD3-202ENST00000355451 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
NUDCD3-202ENST00000355451 UQCRHP07919 91 aa13.73□□□□□ -0.21
NUDCD3-202ENST00000355451 RABEP1Q15276 862 aa13.72□□□□□ -0.21
NUDCD3-202ENST00000355451 EIF3JO75822 258 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-202ENST00000355451 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
NUDCD3-202ENST00000355451 SMC3Q9UQE7 1217 aa13.72□□□□□ -0.21
NUDCD3-202ENST00000355451 STIM1Q13586 685 aa13.72□□□□□ -0.21
NUDCD3-202ENST00000355451 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
NUDCD3-202ENST00000355451 SPATA24Q86W54 205 aa13.71□□□□□ -0.21
NUDCD3-202ENST00000355451 REC8O95072 547 aa13.71□□□□□ -0.21
NUDCD3-202ENST00000355451 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.21
NUDCD3-202ENST00000355451 TMOD2Q9NZR1 351 aa13.7□□□□□ -0.22
NUDCD3-202ENST00000355451 KIAA0754O94854 1291 aa13.7□□□□□ -0.22
NUDCD3-202ENST00000355451 TNIP1Q15025 636 aa13.7□□□□□ -0.22
NUDCD3-202ENST00000355451 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
NUDCD3-202ENST00000355451 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-202ENST00000355451 ERC2O15083 957 aa13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 CETN2P41208 172 aa13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 SSBP05455 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
NUDCD3-202ENST00000355451 CFAP57Q96MR6 1250 aa13.68□□□□□ -0.22
NUDCD3-202ENST00000355451 CCDC175P0C221 793 aa13.68□□□□□ -0.22
NUDCD3-202ENST00000355451 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
NUDCD3-202ENST00000355451 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-202ENST00000355451 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
NUDCD3-202ENST00000355451 FKBP5Q13451 457 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 RALBP1Q15311 655 aa13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 LEKR1Q6ZMV7 388 aa13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
NUDCD3-202ENST00000355451 SMC2O95347 1197 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms