RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MCM2P49736 904 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
SKP1-202ENST00000353411 STK11IPQ8N1F8 1099 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 ZKSCAN5Q9Y2L8 839 aa6.06□□□□□ -1.44
SKP1-202ENST00000353411 CCDC7Q96M83 1385 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 SPDYE4A6NLX3 237 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 HDGFP51858 240 aaKnown RBP6.05□□□□□ -1.44
SKP1-202ENST00000353411 DYDC1Q8WWB3 177 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 PLEKHD1A6NEE1 506 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 LIG1P18858 919 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 DNAAF4Q8WXU2 420 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 INCENPQ9NQS7 918 aa6.05□□□□□ -1.44
SKP1-202ENST00000353411 PRPF40AO75400 957 aaKnown RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 FILIP1Q7Z7B0 1213 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 TRIM5Q9C035 493 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 TTC31Q49AM3 519 aaPredicted RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 CHMP4CQ96CF2 233 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 GTF2F1P35269 517 aaKnown RBP eCLIP6.04□□□□□ -1.44
SKP1-202ENST00000353411 WDR70Q9NW82 654 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 CCDC192P0DO97 292 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 RRP12Q5JTH9 1297 aaKnown RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 PEG3Q9GZU2 1588 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 GOLGA6L7A0A1B0GV03 622 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 K7ELQ4 463 aaPredicted RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 ZNF777Q9ULD5 760 aaPredicted RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 DDX19BQ9UMR2 479 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 GRIN2BQ13224 1484 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 SARNPP82979 210 aaKnown RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 RSPH4AQ5TD94 716 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 BANK1Q8NDB2 785 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 V9GYY5 206 aaPredicted RBP6.04□□□□□ -1.44
SKP1-202ENST00000353411 MNAT1P51948 309 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 TEX2Q8IWB9 1127 aa6.04□□□□□ -1.44
SKP1-202ENST00000353411 SYNJ1O43426 1573 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 KIF18AQ8NI77 898 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 A0A1B0GUL7 405 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 FOXD4L5Q5VV16 416 aaPredicted RBP6.03□□□□□ -1.44
SKP1-202ENST00000353411 FOXD4L4Q8WXT5 416 aaPredicted RBP6.03□□□□□ -1.44
SKP1-202ENST00000353411 UBXN4Q92575 508 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 KLHL40Q2TBA0 621 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 ANKRD20A12PQ8NF67 263 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 SMC4Q9NTJ3 1288 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 NOL7Q9UMY1 257 aaKnown RBP6.03□□□□□ -1.44
SKP1-202ENST00000353411 KIF7Q2M1P5 1343 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 NF2P35240 595 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 TSPY4P0CV99 314 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 TSPY10P0CW01 314 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 ZKSCAN2Q63HK3 967 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 KIAA1328Q86T90 577 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 PANK2Q9BZ23 570 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 MROH2BQ7Z745 1585 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 SETSIPP0DME0 302 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 TSR1Q2NL82 804 aaKnown RBP6.03□□□□□ -1.44
SKP1-202ENST00000353411 INTS3Q68E01 1043 aaKnown RBP6.03□□□□□ -1.44
SKP1-202ENST00000353411 PLCD4Q9BRC7 762 aa6.03□□□□□ -1.44
SKP1-202ENST00000353411 PDE3AQ14432 1141 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 UVSSAQ2YD98 709 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 GOLGA6L10A6NI86 522 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 GBP3Q9H0R5 595 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 DNMBPQ6XZF7 1577 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 EFCC1Q9HA90 598 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 PLEKHH2Q8IVE3 1493 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 SHTN1A0MZ66 631 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 MYRIPQ8NFW9 859 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 BICRAQ9NZM4 1560 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 NEMFO60524 1076 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 KANK4Q5T7N3 995 aaPredicted RBP6.02□□□□□ -1.45
SKP1-202ENST00000353411 TRERF1Q96PN7 1200 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 KANK1Q14678 1352 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 OS9Q13438 667 aaPredicted RBP6.02□□□□□ -1.45
SKP1-202ENST00000353411 PTPN14Q15678 1187 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 COG6Q9Y2V7 657 aa6.02□□□□□ -1.45
SKP1-202ENST00000353411 TNNT1P13805 278 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 MICALCLQ6ZW33 695 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 DCAF11Q8TEB1 546 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 CPSF2Q9P2I0 782 aaKnown RBP6.01□□□□□ -1.45
SKP1-202ENST00000353411 CFTRP13569 1480 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 STK31Q9BXU1 1019 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 L3MBTL2Q969R5 705 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 MYO6Q9UM54 1294 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 NOLC1Q14978 699 aaKnown RBP eCLIP6.01□□□□□ -1.45
SKP1-202ENST00000353411 ZRSR2Q15696 482 aaKnown RBP6.01□□□□□ -1.45
SKP1-202ENST00000353411 SPC24Q8NBT2 197 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 STAG3Q9UJ98 1225 aa6.01□□□□□ -1.45
SKP1-202ENST00000353411 MAGI1Q96QZ7 1491 aaPredicted RBP6□□□□□ -1.45
SKP1-202ENST00000353411 IPO7O95373 1038 aaKnown RBP6□□□□□ -1.45
SKP1-202ENST00000353411 CCDC18Q5T9S5 1454 aa6□□□□□ -1.45
SKP1-202ENST00000353411 SYCE3A1L190 88 aa6□□□□□ -1.45
SKP1-202ENST00000353411 CDC45O75419 566 aa6□□□□□ -1.45
SKP1-202ENST00000353411 CT47B1P0C2W7 299 aaPredicted RBP6□□□□□ -1.45
SKP1-202ENST00000353411 ANKRD45Q5TZF3 282 aa6□□□□□ -1.45
SKP1-202ENST00000353411 LUZP1Q86V48 1076 aa6□□□□□ -1.45
SKP1-202ENST00000353411 TBC1D2Q9BYX2 928 aa6□□□□□ -1.45
SKP1-202ENST00000353411 ZSCAN21Q9Y5A6 473 aaPredicted RBP6□□□□□ -1.45
SKP1-202ENST00000353411 MRVI1Q9Y6F6 885 aa6□□□□□ -1.45
SKP1-202ENST00000353411 PPP4R3CPQ6ZMV5 832 aa6□□□□□ -1.45
SKP1-202ENST00000353411 ZNF397Q8NF99 534 aaPredicted RBP6□□□□□ -1.45
SKP1-202ENST00000353411 GOLIM4O00461 696 aa6□□□□□ -1.45
SKP1-202ENST00000353411 MCM3P25205 808 aa6□□□□□ -1.45
SKP1-202ENST00000353411 TMCO4Q5TGY1 634 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms