RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
SYDE2-202ENST00000341460 NAT10Q9H0A0 1025 aaKnown RBP21.19■□□□□ 0.98
SYDE2-202ENST00000341460 HOOK1Q9UJC3 728 aaKnown RBP21.19■□□□□ 0.98
SYDE2-202ENST00000341460 RILPL2Q969X0 211 aa21.19■□□□□ 0.98
SYDE2-202ENST00000341460 ZRSR2Q15696 482 aaKnown RBP21.18■□□□□ 0.98
SYDE2-202ENST00000341460 CAGE1Q8TC20 777 aa21.18■□□□□ 0.98
SYDE2-202ENST00000341460 CCDC73Q6ZRK6 1079 aa21.18■□□□□ 0.98
SYDE2-202ENST00000341460 COG6Q9Y2V7 657 aa21.18■□□□□ 0.98
SYDE2-202ENST00000341460 PTPRGP23470 1445 aa21.18■□□□□ 0.98
SYDE2-202ENST00000341460 WWC1Q8IX03 1113 aa21.18■□□□□ 0.98
SYDE2-202ENST00000341460 TEFQ10587 303 aa21.17■□□□□ 0.98
SYDE2-202ENST00000341460 NEFHP12036 1026 aa21.17■□□□□ 0.98
SYDE2-202ENST00000341460 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
SYDE2-202ENST00000341460 VPS53Q5VIR6 699 aa21.16■□□□□ 0.98
SYDE2-202ENST00000341460 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
SYDE2-202ENST00000341460 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
SYDE2-202ENST00000341460 ERLIN1O75477 346 aa21.16■□□□□ 0.98
SYDE2-202ENST00000341460 SMC3Q9UQE7 1217 aa21.15■□□□□ 0.98
SYDE2-202ENST00000341460 USP47Q96K76 1375 aa21.15■□□□□ 0.98
SYDE2-202ENST00000341460 VPS37CA5D8V6 355 aaPredicted RBP21.15■□□□□ 0.98
SYDE2-202ENST00000341460 IRX3P78415 501 aaPredicted RBP21.15■□□□□ 0.98
SYDE2-202ENST00000341460 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
SYDE2-202ENST00000341460 EVA1CP58658 441 aa21.13■□□□□ 0.97
SYDE2-202ENST00000341460 MINK1Q8N4C8 1332 aaPredicted RBP21.13■□□□□ 0.97
SYDE2-202ENST00000341460 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.13■□□□□ 0.97
SYDE2-202ENST00000341460 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
SYDE2-202ENST00000341460 TTC5Q8N0Z6 440 aa21.12■□□□□ 0.97
SYDE2-202ENST00000341460 FBXW7Q969H0 707 aa21.12■□□□□ 0.97
SYDE2-202ENST00000341460 CENPHQ9H3R5 247 aa21.12■□□□□ 0.97
SYDE2-202ENST00000341460 RNF20Q5VTR2 975 aa21.11■□□□□ 0.97
SYDE2-202ENST00000341460 NAP1L1P55209 391 aaKnown RBP21.11■□□□□ 0.97
SYDE2-202ENST00000341460 PDILTQ8N807 584 aa21.11■□□□□ 0.97
SYDE2-202ENST00000341460 ZKSCAN1P17029 563 aaPredicted RBP21.11■□□□□ 0.97
SYDE2-202ENST00000341460 DHX8Q14562 1220 aaKnown RBP21.11■□□□□ 0.97
SYDE2-202ENST00000341460 PRPF40AO75400 957 aaKnown RBP21.1■□□□□ 0.97
SYDE2-202ENST00000341460 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
SYDE2-202ENST00000341460 SPC24Q8NBT2 197 aa21.1■□□□□ 0.97
SYDE2-202ENST00000341460 DIAPH1O60610 1272 aaKnown RBP21.1■□□□□ 0.97
SYDE2-202ENST00000341460 IPO4Q8TEX9 1081 aaKnown RBP21.1■□□□□ 0.97
SYDE2-202ENST00000341460 AKAP17AQ02040 695 aaKnown RBP21.09■□□□□ 0.97
SYDE2-202ENST00000341460 DNAJC2Q99543 621 aaKnown RBP21.09■□□□□ 0.97
SYDE2-202ENST00000341460 CCDC47Q96A33 483 aaKnown RBP21.09■□□□□ 0.97
SYDE2-202ENST00000341460 MYO6Q9UM54 1294 aa21.08■□□□□ 0.97
SYDE2-202ENST00000341460 APAF1O14727 1248 aa21.08■□□□□ 0.96
SYDE2-202ENST00000341460 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.96
SYDE2-202ENST00000341460 RUFY2Q8WXA3 655 aa21.08■□□□□ 0.96
SYDE2-202ENST00000341460 C9orf78Q9NZ63 289 aaPredicted RBP21.08■□□□□ 0.96
SYDE2-202ENST00000341460 DDX19BQ9UMR2 479 aa21.08■□□□□ 0.96
SYDE2-202ENST00000341460 TRERF1Q96PN7 1200 aa21.07■□□□□ 0.96
SYDE2-202ENST00000341460 SYNE3Q6ZMZ3 975 aa21.07■□□□□ 0.96
SYDE2-202ENST00000341460 CPLX2Q6PUV4 134 aaKnown RBP21.07■□□□□ 0.96
SYDE2-202ENST00000341460 TIGD1Q96MW7 591 aa21.06■□□□□ 0.96
SYDE2-202ENST00000341460 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
SYDE2-202ENST00000341460 GOLGA6L10A6NI86 522 aa21.06■□□□□ 0.96
SYDE2-202ENST00000341460 MSH5O43196 834 aa21.06■□□□□ 0.96
SYDE2-202ENST00000341460 OLFM4Q6UX06 510 aa21.06■□□□□ 0.96
SYDE2-202ENST00000341460 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
SYDE2-202ENST00000341460 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
SYDE2-202ENST00000341460 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
SYDE2-202ENST00000341460 GTF2A1P52655 376 aaPredicted RBP21.05■□□□□ 0.96
SYDE2-202ENST00000341460 ANO2Q9NQ90 1003 aa21.05■□□□□ 0.96
SYDE2-202ENST00000341460 SMC2O95347 1197 aa21.04■□□□□ 0.96
SYDE2-202ENST00000341460 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
SYDE2-202ENST00000341460 TTLL5Q6EMB2 1281 aa21.04■□□□□ 0.96
SYDE2-202ENST00000341460 MCM4P33991 863 aa21.03■□□□□ 0.96
SYDE2-202ENST00000341460 RBM25P49756 843 aaKnown RBP21.03■□□□□ 0.96
SYDE2-202ENST00000341460 TRIM29Q14134 588 aa21.03■□□□□ 0.96
SYDE2-202ENST00000341460 TMCO3Q6UWJ1 677 aa21.03■□□□□ 0.96
SYDE2-202ENST00000341460 RIPK4P57078 832 aa21.03■□□□□ 0.96
SYDE2-202ENST00000341460 DDX58O95786 925 aaKnown RBP21.02■□□□□ 0.96
SYDE2-202ENST00000341460 AAMPQ13685 434 aa21.02■□□□□ 0.96
SYDE2-202ENST00000341460 SDF4Q9BRK5 362 aa21.02■□□□□ 0.96
SYDE2-202ENST00000341460 FAM107BQ9H098 131 aa21.02■□□□□ 0.96
SYDE2-202ENST00000341460 AMOTL1Q8IY63 956 aa21.02■□□□□ 0.96
SYDE2-202ENST00000341460 NOL10Q9BSC4 688 aaKnown RBP21.02■□□□□ 0.96
SYDE2-202ENST00000341460 CYB5RLQ6IPT4 315 aa21.02■□□□□ 0.95
SYDE2-202ENST00000341460 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.01■□□□□ 0.95
SYDE2-202ENST00000341460 CCDC102AQ96A19 550 aa21.01■□□□□ 0.95
SYDE2-202ENST00000341460 IFIT2P09913 472 aaKnown RBP21.01■□□□□ 0.95
SYDE2-202ENST00000341460 ROCK1Q13464 1354 aa21.01■□□□□ 0.95
SYDE2-202ENST00000341460 DZIP1LQ8IYY4 767 aaKnown RBP21.01■□□□□ 0.95
SYDE2-202ENST00000341460 MYOM3Q5VTT5 1437 aa21.01■□□□□ 0.95
SYDE2-202ENST00000341460 MPNDQ8N594 471 aa21.01■□□□□ 0.95
SYDE2-202ENST00000341460 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
SYDE2-202ENST00000341460 PSME1Q06323 249 aa21■□□□□ 0.95
SYDE2-202ENST00000341460 UBXN4Q92575 508 aa21■□□□□ 0.95
SYDE2-202ENST00000341460 STAC3Q96MF2 364 aa21■□□□□ 0.95
SYDE2-202ENST00000341460 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21■□□□□ 0.95
SYDE2-202ENST00000341460 DHX37Q8IY37 1157 aaKnown RBP20.99■□□□□ 0.95
SYDE2-202ENST00000341460 SHTN1A0MZ66 631 aa20.99■□□□□ 0.95
SYDE2-202ENST00000341460 CCDC192P0DO97 292 aa20.99■□□□□ 0.95
SYDE2-202ENST00000341460 TNNT1P13805 278 aa20.99■□□□□ 0.95
SYDE2-202ENST00000341460 PDIA4P13667 645 aaKnown RBP20.99■□□□□ 0.95
SYDE2-202ENST00000341460 SMARCE1Q969G3 411 aa20.99■□□□□ 0.95
SYDE2-202ENST00000341460 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.98■□□□□ 0.95
SYDE2-202ENST00000341460 DYNC1I1O14576 645 aa20.98■□□□□ 0.95
SYDE2-202ENST00000341460 RUNDC1Q96C34 613 aa20.98■□□□□ 0.95
SYDE2-202ENST00000341460 TICAM2Q86XR7 235 aa20.98■□□□□ 0.95
SYDE2-202ENST00000341460 LRRCC1Q9C099 1032 aa20.98■□□□□ 0.95
SYDE2-202ENST00000341460 CPLX1O14810 134 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms