RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 SETQ01105 290 aaPredicted RBP19.66■□□□□ 0.74
RTL6-201ENST00000341255 CDC45O75419 566 aa19.66■□□□□ 0.74
RTL6-201ENST00000341255 SASS6Q6UVJ0 657 aa19.66■□□□□ 0.74
RTL6-201ENST00000341255 TMEM132EQ6IEE7 984 aa19.65■□□□□ 0.74
RTL6-201ENST00000341255 IFT57Q9NWB7 429 aa19.65■□□□□ 0.74
RTL6-201ENST00000341255 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
RTL6-201ENST00000341255 TPM2P07951 284 aa19.65■□□□□ 0.74
RTL6-201ENST00000341255 CCDC70Q6NSX1 233 aa19.64■□□□□ 0.73
RTL6-201ENST00000341255 SYTL4Q96C24 671 aaPredicted RBP19.64■□□□□ 0.73
RTL6-201ENST00000341255 MTHFSP49914 203 aa19.64■□□□□ 0.73
RTL6-201ENST00000341255 FBXW7Q969H0 707 aa19.64■□□□□ 0.73
RTL6-201ENST00000341255 RNF214Q8ND24 703 aa19.64■□□□□ 0.73
RTL6-201ENST00000341255 IL27Q8NEV9 243 aa19.64■□□□□ 0.73
RTL6-201ENST00000341255 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
RTL6-201ENST00000341255 VPS37DQ86XT2 251 aa19.63■□□□□ 0.73
RTL6-201ENST00000341255 TEX35Q5T0J7 233 aa19.62■□□□□ 0.73
RTL6-201ENST00000341255 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
RTL6-201ENST00000341255 TCP11L2Q8N4U5 519 aa19.61■□□□□ 0.73
RTL6-201ENST00000341255 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
RTL6-201ENST00000341255 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
RTL6-201ENST00000341255 PRDM2Q13029 1718 aa19.61■□□□□ 0.73
RTL6-201ENST00000341255 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
RTL6-201ENST00000341255 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
RTL6-201ENST00000341255 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
RTL6-201ENST00000341255 NLRP6P59044 892 aa19.6■□□□□ 0.73
RTL6-201ENST00000341255 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
RTL6-201ENST00000341255 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
RTL6-201ENST00000341255 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
RTL6-201ENST00000341255 MSH5O43196 834 aa19.6■□□□□ 0.73
RTL6-201ENST00000341255 FOSBP53539 338 aa19.6■□□□□ 0.73
RTL6-201ENST00000341255 IPO7O95373 1038 aaKnown RBP19.59■□□□□ 0.73
RTL6-201ENST00000341255 CCDC47Q96A33 483 aaKnown RBP19.59■□□□□ 0.73
RTL6-201ENST00000341255 ATF3P18847 181 aa19.59■□□□□ 0.73
RTL6-201ENST00000341255 CCDC73Q6ZRK6 1079 aa19.59■□□□□ 0.73
RTL6-201ENST00000341255 PCMTD1Q96MG8 357 aaPredicted RBP19.59■□□□□ 0.73
RTL6-201ENST00000341255 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
RTL6-201ENST00000341255 TRIM34Q9BYJ4 488 aa19.58■□□□□ 0.73
RTL6-201ENST00000341255 HOOK1Q9UJC3 728 aaKnown RBP19.58■□□□□ 0.73
RTL6-201ENST00000341255 BACH2Q9BYV9 841 aa19.58■□□□□ 0.73
RTL6-201ENST00000341255 BCL11BQ9C0K0 894 aaPredicted RBP19.58■□□□□ 0.73
RTL6-201ENST00000341255 ANKRD20A12PQ8NF67 263 aa19.58■□□□□ 0.72
RTL6-201ENST00000341255 ARHGAP5Q13017 1502 aa19.58■□□□□ 0.72
RTL6-201ENST00000341255 NFXL1Q6ZNB6 911 aa19.58■□□□□ 0.72
RTL6-201ENST00000341255 ERICH2A1L162 156 aa19.57■□□□□ 0.72
RTL6-201ENST00000341255 PPP2R1AP30153 589 aa19.57■□□□□ 0.72
RTL6-201ENST00000341255 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
RTL6-201ENST00000341255 AIMP1Q12904 312 aaKnown RBP19.56■□□□□ 0.72
RTL6-201ENST00000341255 RAD21O60216 631 aa19.56■□□□□ 0.72
RTL6-201ENST00000341255 MNS1Q8NEH6 495 aa19.56■□□□□ 0.72
RTL6-201ENST00000341255 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
RTL6-201ENST00000341255 GNAI3P08754 354 aa19.56■□□□□ 0.72
RTL6-201ENST00000341255 NEUROD6Q96NK8 337 aa19.55■□□□□ 0.72
RTL6-201ENST00000341255 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
RTL6-201ENST00000341255 GAS2L2Q8NHY3 880 aa19.55■□□□□ 0.72
RTL6-201ENST00000341255 NUTM2GQ5VZR2 741 aa19.55■□□□□ 0.72
RTL6-201ENST00000341255 RALYLQ86SE5 291 aaKnown RBP19.55■□□□□ 0.72
RTL6-201ENST00000341255 ARGLU1Q9NWB6 273 aaPredicted RBP19.55■□□□□ 0.72
RTL6-201ENST00000341255 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
RTL6-201ENST00000341255 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
RTL6-201ENST00000341255 PRPF40AO75400 957 aaKnown RBP19.54■□□□□ 0.72
RTL6-201ENST00000341255 ANO8Q9HCE9 1232 aaPredicted RBP19.54■□□□□ 0.72
RTL6-201ENST00000341255 MAP7D2Q96T17 732 aa19.53■□□□□ 0.72
RTL6-201ENST00000341255 SAFBQ15424 915 aaKnown RBP eCLIP19.53■□□□□ 0.72
RTL6-201ENST00000341255 CCDC30Q5VVM6 783 aa19.53■□□□□ 0.72
RTL6-201ENST00000341255 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
RTL6-201ENST00000341255 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.53■□□□□ 0.72
RTL6-201ENST00000341255 PRKAR2BP31323 418 aa19.53■□□□□ 0.72
RTL6-201ENST00000341255 MTERF4Q7Z6M4 381 aaKnown RBP19.53■□□□□ 0.72
RTL6-201ENST00000341255 TCEAL9Q9UHQ7 104 aa19.53■□□□□ 0.72
RTL6-201ENST00000341255 CLASRPQ8N2M8 674 aaKnown RBP19.52■□□□□ 0.72
RTL6-201ENST00000341255 BCAR3O75815 825 aa19.52■□□□□ 0.72
RTL6-201ENST00000341255 MBD3O95983 291 aa19.52■□□□□ 0.72
RTL6-201ENST00000341255 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
RTL6-201ENST00000341255 CCDC27Q2M243 656 aa19.52■□□□□ 0.72
RTL6-201ENST00000341255 CFTRP13569 1480 aa19.52■□□□□ 0.72
RTL6-201ENST00000341255 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.71
RTL6-201ENST00000341255 NEK4P51957 841 aa19.52■□□□□ 0.71
RTL6-201ENST00000341255 WASHC4Q2M389 1173 aa19.52■□□□□ 0.71
RTL6-201ENST00000341255 CCDC173Q0VFZ6 552 aa19.51■□□□□ 0.71
RTL6-201ENST00000341255 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
RTL6-201ENST00000341255 EXOSC9Q06265 439 aaKnown RBP19.51■□□□□ 0.71
RTL6-201ENST00000341255 TSPY26PQ9H489 355 aa19.51■□□□□ 0.71
RTL6-201ENST00000341255 CTDP1Q9Y5B0 961 aaPredicted RBP19.51■□□□□ 0.71
RTL6-201ENST00000341255 NBPF1Q3BBV0 1214 aa19.5■□□□□ 0.71
RTL6-201ENST00000341255 CNTROBQ8N137 903 aa19.5■□□□□ 0.71
RTL6-201ENST00000341255 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
RTL6-201ENST00000341255 RABEP1Q15276 862 aa19.49■□□□□ 0.71
RTL6-201ENST00000341255 PATL2C9JE40 543 aaKnown RBP19.49■□□□□ 0.71
RTL6-201ENST00000341255 SURF6O75683 361 aaKnown RBP19.49■□□□□ 0.71
RTL6-201ENST00000341255 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
RTL6-201ENST00000341255 PSMA5P28066 241 aa19.49■□□□□ 0.71
RTL6-201ENST00000341255 LETM1O95202 739 aaPredicted RBP19.49■□□□□ 0.71
RTL6-201ENST00000341255 C1orf115Q9H7X2 142 aa19.49■□□□□ 0.71
RTL6-201ENST00000341255 TRIM5Q9C035 493 aa19.48■□□□□ 0.71
RTL6-201ENST00000341255 NAT10Q9H0A0 1025 aaKnown RBP19.48■□□□□ 0.71
RTL6-201ENST00000341255 PRM3Q9NNZ6 103 aa19.48■□□□□ 0.71
RTL6-201ENST00000341255 PRAM1Q96QH2 718 aa19.48■□□□□ 0.71
RTL6-201ENST00000341255 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
RTL6-201ENST00000341255 PNISRQ8TF01 805 aaKnown RBP19.48■□□□□ 0.71
RTL6-201ENST00000341255 SDF4Q9BRK5 362 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms