RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
PDE4D-203ENST00000340635 PKNOX2Q96KN3 472 aa16.62■□□□□ 0.25
PDE4D-203ENST00000340635 CCDC181Q5TID7 509 aa16.62■□□□□ 0.25
PDE4D-203ENST00000340635 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
PDE4D-203ENST00000340635 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
PDE4D-203ENST00000340635 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
PDE4D-203ENST00000340635 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
PDE4D-203ENST00000340635 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
PDE4D-203ENST00000340635 NUCB2P80303 420 aa16.61■□□□□ 0.25
PDE4D-203ENST00000340635 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
PDE4D-203ENST00000340635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDE4D-203ENST00000340635 PDE4AP27815 886 aa16.6■□□□□ 0.25
PDE4D-203ENST00000340635 PKD2Q13563 968 aa16.6■□□□□ 0.25
PDE4D-203ENST00000340635 TXLNBQ8N3L3 684 aa16.6■□□□□ 0.25
PDE4D-203ENST00000340635 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
PDE4D-203ENST00000340635 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
PDE4D-203ENST00000340635 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
PDE4D-203ENST00000340635 ERC2O15083 957 aa16.59■□□□□ 0.25
PDE4D-203ENST00000340635 GIMAP7Q8NHV1 300 aa16.59■□□□□ 0.25
PDE4D-203ENST00000340635 DEF6Q9H4E7 631 aa16.59■□□□□ 0.25
PDE4D-203ENST00000340635 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.25
PDE4D-203ENST00000340635 BCL2L13Q9BXK5 485 aa16.58■□□□□ 0.25
PDE4D-203ENST00000340635 KDM4AO75164 1064 aa16.58■□□□□ 0.25
PDE4D-203ENST00000340635 USP8P40818 1118 aa16.58■□□□□ 0.24
PDE4D-203ENST00000340635 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
PDE4D-203ENST00000340635 CCDC91Q7Z6B0 441 aa16.58■□□□□ 0.24
PDE4D-203ENST00000340635 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
PDE4D-203ENST00000340635 NECTIN2Q92692 538 aa16.57■□□□□ 0.24
PDE4D-203ENST00000340635 STAMBPO95630 424 aa16.57■□□□□ 0.24
PDE4D-203ENST00000340635 LETM1O95202 739 aaPredicted RBP16.57■□□□□ 0.24
PDE4D-203ENST00000340635 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
PDE4D-203ENST00000340635 KINO60870 393 aaKnown RBP16.57■□□□□ 0.24
PDE4D-203ENST00000340635 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
PDE4D-203ENST00000340635 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.56■□□□□ 0.24
PDE4D-203ENST00000340635 GOLGA6L10A0A0M3HER8 536 aa16.56■□□□□ 0.24
PDE4D-203ENST00000340635 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
PDE4D-203ENST00000340635 SLC3A2P08195 630 aaKnown RBP16.56■□□□□ 0.24
PDE4D-203ENST00000340635 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
PDE4D-203ENST00000340635 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
PDE4D-203ENST00000340635 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
PDE4D-203ENST00000340635 TRIM21P19474 475 aaKnown RBP16.55■□□□□ 0.24
PDE4D-203ENST00000340635 COG3Q96JB2 828 aa16.55■□□□□ 0.24
PDE4D-203ENST00000340635 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
PDE4D-203ENST00000340635 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
PDE4D-203ENST00000340635 PPM1EQ8WY54 764 aa16.55■□□□□ 0.24
PDE4D-203ENST00000340635 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
PDE4D-203ENST00000340635 BCCIPQ9P287 314 aaKnown RBP eCLIP16.55■□□□□ 0.24
PDE4D-203ENST00000340635 PSMA5P28066 241 aa16.54■□□□□ 0.24
PDE4D-203ENST00000340635 NUTM2DQ5VT03 806 aaPredicted RBP16.54■□□□□ 0.24
PDE4D-203ENST00000340635 GRIPAP1Q4V328 841 aa16.54■□□□□ 0.24
PDE4D-203ENST00000340635 FOXD1Q16676 465 aa16.54■□□□□ 0.24
PDE4D-203ENST00000340635 IQCEQ6IPM2 695 aa16.54■□□□□ 0.24
PDE4D-203ENST00000340635 FAM193AP78312 1265 aa16.53■□□□□ 0.24
PDE4D-203ENST00000340635 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
PDE4D-203ENST00000340635 STIM1Q13586 685 aa16.53■□□□□ 0.24
PDE4D-203ENST00000340635 TANGO6Q9C0B7 1094 aa16.53■□□□□ 0.24
PDE4D-203ENST00000340635 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■■■□ 21.3
PDE4D-203ENST00000340635 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
PDE4D-203ENST00000340635 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.24
PDE4D-203ENST00000340635 NLRP13Q86W25 1043 aa16.52■□□□□ 0.24
PDE4D-203ENST00000340635 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.24
PDE4D-203ENST00000340635 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
PDE4D-203ENST00000340635 MRE11P49959 708 aa16.52■□□□□ 0.24
PDE4D-203ENST00000340635 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.23
PDE4D-203ENST00000340635 KIF3BO15066 747 aa16.52■□□□□ 0.23
PDE4D-203ENST00000340635 ZHX3Q9H4I2 956 aa16.52■□□□□ 0.23
PDE4D-203ENST00000340635 PPFIBP1Q86W92 1011 aa16.51■□□□□ 0.23
PDE4D-203ENST00000340635 ERLIN1O75477 346 aa16.51■□□□□ 0.23
PDE4D-203ENST00000340635 PLIN1O60240 522 aa16.51■□□□□ 0.23
PDE4D-203ENST00000340635 DDX23Q9BUQ8 820 aaKnown RBP16.51■□□□□ 0.23
PDE4D-203ENST00000340635 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
PDE4D-203ENST00000340635 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
PDE4D-203ENST00000340635 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
PDE4D-203ENST00000340635 ANAPC15P60006 121 aa16.5■□□□□ 0.23
PDE4D-203ENST00000340635 E9PSI1 815 aa16.5■□□□□ 0.23
PDE4D-203ENST00000340635 SERPINC1P01008 464 aa16.5■□□□□ 0.23
PDE4D-203ENST00000340635 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
PDE4D-203ENST00000340635 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
PDE4D-203ENST00000340635 FKBP5Q13451 457 aaPredicted RBP16.49■□□□□ 0.23
PDE4D-203ENST00000340635 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
PDE4D-203ENST00000340635 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
PDE4D-203ENST00000340635 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
PDE4D-203ENST00000340635 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
PDE4D-203ENST00000340635 RNF214Q8ND24 703 aa16.48■□□□□ 0.23
PDE4D-203ENST00000340635 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
PDE4D-203ENST00000340635 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
PDE4D-203ENST00000340635 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
PDE4D-203ENST00000340635 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
PDE4D-203ENST00000340635 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 SPATA24Q86W54 205 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 FEZ1Q99689 392 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 NUP155O75694 1391 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 RIC3Q7Z5B4 369 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 DACH1Q9UI36 760 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
PDE4D-203ENST00000340635 TNIKQ9UKE5 1360 aa16.46■□□□□ 0.23
PDE4D-203ENST00000340635 COG6Q9Y2V7 657 aa16.46■□□□□ 0.23
PDE4D-203ENST00000340635 MPHOSPH10O00566 681 aaKnown RBP16.46■□□□□ 0.23
PDE4D-203ENST00000340635 DNAI2Q9GZS0 605 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms