RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 TRAK2O60296 914 aa20.16■□□□□ 0.82
SATB1-201ENST00000338745 BRPF3Q9ULD4 1205 aa20.16■□□□□ 0.82
SATB1-201ENST00000338745 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
SATB1-201ENST00000338745 RUNDC1Q96C34 613 aa20.16■□□□□ 0.82
SATB1-201ENST00000338745 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
SATB1-201ENST00000338745 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
SATB1-201ENST00000338745 SMC2O95347 1197 aa20.15■□□□□ 0.82
SATB1-201ENST00000338745 NINLQ9Y2I6 1382 aa20.14■□□□□ 0.82
SATB1-201ENST00000338745 SPC24Q8NBT2 197 aa20.14■□□□□ 0.82
SATB1-201ENST00000338745 TSPY26PQ9H489 355 aa20.14■□□□□ 0.82
SATB1-201ENST00000338745 HMOX1P09601 288 aa20.14■□□□□ 0.82
SATB1-201ENST00000338745 CT47A1Q5JQC4 288 aaPredicted RBP20.14■□□□□ 0.82
SATB1-201ENST00000338745 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.81
SATB1-201ENST00000338745 MSH5O43196 834 aa20.14■□□□□ 0.81
SATB1-201ENST00000338745 SAMD1Q6SPF0 538 aaPredicted RBP20.14■□□□□ 0.81
SATB1-201ENST00000338745 CDR1P51861 262 aa20.13■□□□□ 0.81
SATB1-201ENST00000338745 CWC15Q9P013 229 aaKnown RBP20.13■□□□□ 0.81
SATB1-201ENST00000338745 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
SATB1-201ENST00000338745 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
SATB1-201ENST00000338745 SAFBQ15424 915 aaKnown RBP eCLIP20.12■□□□□ 0.81
SATB1-201ENST00000338745 ODF2Q5BJF6 829 aa20.12■□□□□ 0.81
SATB1-201ENST00000338745 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
SATB1-201ENST00000338745 ERC2O15083 957 aa20.11■□□□□ 0.81
SATB1-201ENST00000338745 H0YHG0 523 aa20.11■□□□□ 0.81
SATB1-201ENST00000338745 CCDC43Q96MW1 224 aaKnown RBP20.11■□□□□ 0.81
SATB1-201ENST00000338745 CDC45O75419 566 aa20.11■□□□□ 0.81
SATB1-201ENST00000338745 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
SATB1-201ENST00000338745 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
SATB1-201ENST00000338745 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
SATB1-201ENST00000338745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.11■□□□□ 0.81
SATB1-201ENST00000338745 LETM1O95202 739 aaPredicted RBP20.1■□□□□ 0.81
SATB1-201ENST00000338745 MTMR7Q9Y216 660 aa20.1■□□□□ 0.81
SATB1-201ENST00000338745 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
SATB1-201ENST00000338745 PRPF40AO75400 957 aaKnown RBP20.09■□□□□ 0.81
SATB1-201ENST00000338745 NEUROD6Q96NK8 337 aa20.09■□□□□ 0.81
SATB1-201ENST00000338745 RDXP35241 583 aaKnown RBP20.09■□□□□ 0.81
SATB1-201ENST00000338745 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
SATB1-201ENST00000338745 ZFYVE27Q5T4F4 411 aa20.09■□□□□ 0.81
SATB1-201ENST00000338745 WASHC4Q2M389 1173 aa20.09■□□□□ 0.81
SATB1-201ENST00000338745 CNTROBQ8N137 903 aa20.08■□□□□ 0.81
SATB1-201ENST00000338745 CNTLNQ9NXG0 1405 aa20.08■□□□□ 0.8
SATB1-201ENST00000338745 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
SATB1-201ENST00000338745 CEBPZQ03701 1054 aaKnown RBP20.07■□□□□ 0.8
SATB1-201ENST00000338745 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
SATB1-201ENST00000338745 RALYLQ86SE5 291 aaKnown RBP20.06■□□□□ 0.8
SATB1-201ENST00000338745 BRMS1Q9HCU9 246 aa20.06■□□□□ 0.8
SATB1-201ENST00000338745 MTERF4Q7Z6M4 381 aaKnown RBP20.06■□□□□ 0.8
SATB1-201ENST00000338745 CCDC173Q0VFZ6 552 aa20.06■□□□□ 0.8
SATB1-201ENST00000338745 RIC3Q7Z5B4 369 aa20.06■□□□□ 0.8
SATB1-201ENST00000338745 SDF4Q9BRK5 362 aa20.06■□□□□ 0.8
SATB1-201ENST00000338745 PLCD4Q9BRC7 762 aa20.05■□□□□ 0.8
SATB1-201ENST00000338745 PSMA5P28066 241 aa20.05■□□□□ 0.8
SATB1-201ENST00000338745 ERCC4Q92889 916 aaPredicted RBP20.04■□□□□ 0.8
SATB1-201ENST00000338745 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
SATB1-201ENST00000338745 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
SATB1-201ENST00000338745 LEKR1Q6ZMV7 388 aa20.04■□□□□ 0.8
SATB1-201ENST00000338745 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
SATB1-201ENST00000338745 CCDC7Q96M83 1385 aa20.03■□□□□ 0.8
SATB1-201ENST00000338745 DHX37Q8IY37 1157 aaKnown RBP20.03■□□□□ 0.8
SATB1-201ENST00000338745 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
SATB1-201ENST00000338745 CCDC66A2RUB6 948 aa20.03■□□□□ 0.8
SATB1-201ENST00000338745 FMNL2Q96PY5 1086 aa20.03■□□□□ 0.8
SATB1-201ENST00000338745 PKNOX2Q96KN3 472 aa20.02■□□□□ 0.8
SATB1-201ENST00000338745 OFD1O75665 1012 aa20.01■□□□□ 0.79
SATB1-201ENST00000338745 UBTFL1P0CB47 393 aaPredicted RBP20.01■□□□□ 0.79
SATB1-201ENST00000338745 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
SATB1-201ENST00000338745 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
SATB1-201ENST00000338745 PSME1Q06323 249 aa20.01■□□□□ 0.79
SATB1-201ENST00000338745 MPNDQ8N594 471 aa20.01■□□□□ 0.79
SATB1-201ENST00000338745 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
SATB1-201ENST00000338745 KIF7Q2M1P5 1343 aa20■□□□□ 0.79
SATB1-201ENST00000338745 GNAI1P63096 354 aa20■□□□□ 0.79
SATB1-201ENST00000338745 AXDND1Q5T1B0 1012 aaPredicted RBP20■□□□□ 0.79
SATB1-201ENST00000338745 SMARCE1Q969G3 411 aa20■□□□□ 0.79
SATB1-201ENST00000338745 DNAJC2Q99543 621 aaKnown RBP20■□□□□ 0.79
SATB1-201ENST00000338745 HSP90AB4PQ58FF6 505 aa20■□□□□ 0.79
SATB1-201ENST00000338745 MAGEC2Q9UBF1 373 aaPredicted RBP20■□□□□ 0.79
SATB1-201ENST00000338745 MYO6Q9UM54 1294 aa20■□□□□ 0.79
SATB1-201ENST00000338745 FSD1Q9BTV5 496 aa19.99■□□□□ 0.79
SATB1-201ENST00000338745 KINO60870 393 aaKnown RBP19.99■□□□□ 0.79
SATB1-201ENST00000338745 XBP1P17861 261 aa19.99■□□□□ 0.79
SATB1-201ENST00000338745 MAP4K4O95819 1239 aaPredicted RBP19.98■□□□□ 0.79
SATB1-201ENST00000338745 UQCRHLA0A096LP55 91 aa19.98■□□□□ 0.79
SATB1-201ENST00000338745 UQCRHP07919 91 aa19.98■□□□□ 0.79
SATB1-201ENST00000338745 TSPYL1Q9H0U9 437 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 FIBPO43427 364 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 CCP110O43303 1012 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 AKNAQ7Z591 1439 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 NEK4P51957 841 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 CDCA7LQ96GN5 454 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 HSP90AB3PQ58FF7 597 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 PDZRN3Q9UPQ7 1066 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 STK3Q13188 491 aa19.97■□□□□ 0.79
SATB1-201ENST00000338745 CWC22Q9HCG8 908 aaKnown RBP19.96■□□□□ 0.79
SATB1-201ENST00000338745 FILIP1LQ4L180 1135 aa19.96■□□□□ 0.79
SATB1-201ENST00000338745 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
SATB1-201ENST00000338745 CUX1P39880 1505 aa19.96■□□□□ 0.79
SATB1-201ENST00000338745 ATP2B1P20020 1258 aa19.95■□□□□ 0.78
SATB1-201ENST00000338745 NUTM2GQ5VZR2 741 aa19.95■□□□□ 0.78
SATB1-201ENST00000338745 ADAMTS8Q9UP79 889 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms