RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 SHTN1A0MZ66 631 aa12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 CPSF2Q9P2I0 782 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 CWC22Q9HCG8 908 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 ERICH4A6NGS2 130 aa12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 OFD1O75665 1012 aa12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 TDO2P48775 406 aa12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 ERLIN2O94905 339 aa12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 ANKRD18AQ8IVF6 992 aa12.35□□□□□ -0.43
SPTBN1-201ENST00000333896 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
SPTBN1-201ENST00000333896 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-201ENST00000333896 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
SPTBN1-201ENST00000333896 CCDC94Q9BW85 323 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-201ENST00000333896 ZHX1Q9UKY1 873 aaPredicted RBP12.34□□□□□ -0.43
SPTBN1-201ENST00000333896 ABCC9O60706 1549 aa12.33□□□□□ -0.44
SPTBN1-201ENST00000333896 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
SPTBN1-201ENST00000333896 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
SPTBN1-201ENST00000333896 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
SPTBN1-201ENST00000333896 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-201ENST00000333896 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
SPTBN1-201ENST00000333896 TMCO5BA8MYB1 307 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 TMCO3Q6UWJ1 677 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 FOSBP53539 338 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 TAX1BP1Q86VP1 789 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 HS1BP3Q53T59 392 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 SWAP70Q9UH65 585 aa12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 SEPT11Q9NVA2 429 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-201ENST00000333896 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 E9PSI1 815 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 SAFB2Q14151 953 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 KRT222Q8N1A0 295 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 GBP2P32456 591 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-201ENST00000333896 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
SPTBN1-201ENST00000333896 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-201ENST00000333896 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■□□□□ 10.2
SPTBN1-201ENST00000333896 PDCP20941 246 aa12.3□□□□□ -0.44
SPTBN1-201ENST00000333896 AMOTL1Q8IY63 956 aa12.3□□□□□ -0.44
SPTBN1-201ENST00000333896 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
SPTBN1-201ENST00000333896 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
SPTBN1-201ENST00000333896 CEP63Q96MT8 703 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 FAM193AP78312 1265 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 ANKRD45Q5TZF3 282 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 CPLX2Q6PUV4 134 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 CPLX1O14810 134 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 DHX16O60231 1041 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 TERF1P54274 439 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 ANO2Q9NQ90 1003 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 SARNPP82979 210 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 CBX1P83916 185 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 SLC26A8Q96RN1 970 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 FMN1Q68DA7 1419 aa12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 NOL10Q9BSC4 688 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-201ENST00000333896 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 KIF18AQ8NI77 898 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 FEZ1Q99689 392 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 MNAT1P51948 309 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 V9GYY5 206 aaPredicted RBP12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 TUBB4BP68371 445 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
SPTBN1-201ENST00000333896 SMC2O95347 1197 aa12.27□□□□□ -0.44
SPTBN1-201ENST00000333896 CSB-PGBD3P0DP91 1061 aa12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 RUFY2Q8WXA3 655 aa12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 IBSPP21815 317 aaPredicted RBP12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 UBXN4Q92575 508 aa12.27□□□□□ -0.45
SPTBN1-201ENST00000333896 NFXL1Q6ZNB6 911 aa12.26□□□□□ -0.45
SPTBN1-201ENST00000333896 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
SPTBN1-201ENST00000333896 NEMFO60524 1076 aa12.26□□□□□ -0.45
SPTBN1-201ENST00000333896 SIN3AQ96ST3 1273 aa12.26□□□□□ -0.45
SPTBN1-201ENST00000333896 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
SPTBN1-201ENST00000333896 MCM4P33991 863 aa12.26□□□□□ -0.45
SPTBN1-201ENST00000333896 GOLGA6L9A6NEM1 432 aa12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 SYCP1Q15431 976 aa12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 LUC7LQ9NQ29 371 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms