RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 L3MBTL2Q969R5 705 aa17■□□□□ 0.31
PCM1-201ENST00000325083 PSME1Q06323 249 aa17■□□□□ 0.31
PCM1-201ENST00000325083 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
PCM1-201ENST00000325083 FAM177BA6PVY3 158 aa17■□□□□ 0.31
PCM1-201ENST00000325083 STK11IPQ8N1F8 1099 aa16.99■□□□□ 0.31
PCM1-201ENST00000325083 RIPK4P57078 832 aa16.99■□□□□ 0.31
PCM1-201ENST00000325083 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
PCM1-201ENST00000325083 CDK5RAP3Q96JB5 506 aa16.99■□□□□ 0.31
PCM1-201ENST00000325083 SYCP1Q15431 976 aa16.98■□□□□ 0.31
PCM1-201ENST00000325083 CHMP5Q9NZZ3 219 aa16.98■□□□□ 0.31
PCM1-201ENST00000325083 MAGEC2Q9UBF1 373 aaPredicted RBP16.98■□□□□ 0.31
PCM1-201ENST00000325083 TSPYL1Q9H0U9 437 aa16.98■□□□□ 0.31
PCM1-201ENST00000325083 DDX19BQ9UMR2 479 aa16.98■□□□□ 0.31
PCM1-201ENST00000325083 RNF214Q8ND24 703 aa16.98■□□□□ 0.31
PCM1-201ENST00000325083 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
PCM1-201ENST00000325083 ATP2B1P20020 1258 aa16.97■□□□□ 0.31
PCM1-201ENST00000325083 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
PCM1-201ENST00000325083 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
PCM1-201ENST00000325083 XBP1P17861 261 aa16.96■□□□□ 0.31
PCM1-201ENST00000325083 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
PCM1-201ENST00000325083 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
PCM1-201ENST00000325083 AXDND1Q5T1B0 1012 aaPredicted RBP16.96■□□□□ 0.31
PCM1-201ENST00000325083 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
PCM1-201ENST00000325083 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
PCM1-201ENST00000325083 SEPT7Q16181 437 aaKnown RBP16.96■□□□□ 0.31
PCM1-201ENST00000325083 APAF1O14727 1248 aa16.96■□□□□ 0.3
PCM1-201ENST00000325083 ERC2O15083 957 aa16.96■□□□□ 0.3
PCM1-201ENST00000325083 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.3
PCM1-201ENST00000325083 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
PCM1-201ENST00000325083 ENOX2Q16206 610 aaKnown RBP16.95■□□□□ 0.3
PCM1-201ENST00000325083 SOGA1O94964 1423 aa16.95■□□□□ 0.3
PCM1-201ENST00000325083 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
PCM1-201ENST00000325083 SDF4Q9BRK5 362 aa16.95■□□□□ 0.3
PCM1-201ENST00000325083 HMOX1P09601 288 aa16.95■□□□□ 0.3
PCM1-201ENST00000325083 ST20-MTHFSA0A0A6YYL1 179 aa16.95■□□□□ 0.3
PCM1-201ENST00000325083 SPC24Q8NBT2 197 aa16.95■□□□□ 0.3
PCM1-201ENST00000325083 FMNL2Q96PY5 1086 aa16.95■□□□□ 0.3
PCM1-201ENST00000325083 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
PCM1-201ENST00000325083 NINLQ9Y2I6 1382 aa16.94■□□□□ 0.3
PCM1-201ENST00000325083 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
PCM1-201ENST00000325083 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
PCM1-201ENST00000325083 DNAJC2Q99543 621 aaKnown RBP16.94■□□□□ 0.3
PCM1-201ENST00000325083 NUCB2P80303 420 aa16.94■□□□□ 0.3
PCM1-201ENST00000325083 ATP2B2Q01814 1243 aa16.93■□□□□ 0.3
PCM1-201ENST00000325083 ZRSR2Q15696 482 aaKnown RBP16.93■□□□□ 0.3
PCM1-201ENST00000325083 SMARCE1Q969G3 411 aa16.93■□□□□ 0.3
PCM1-201ENST00000325083 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
PCM1-201ENST00000325083 TRIM5Q9C035 493 aa16.93■□□□□ 0.3
PCM1-201ENST00000325083 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
PCM1-201ENST00000325083 NUTM2GQ5VZR2 741 aa16.92■□□□□ 0.3
PCM1-201ENST00000325083 RBM10P98175 930 aaKnown RBP16.91■□□□□ 0.3
PCM1-201ENST00000325083 LEKR1Q6ZMV7 388 aa16.91■□□□□ 0.3
PCM1-201ENST00000325083 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
PCM1-201ENST00000325083 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
PCM1-201ENST00000325083 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
PCM1-201ENST00000325083 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
PCM1-201ENST00000325083 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
PCM1-201ENST00000325083 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
PCM1-201ENST00000325083 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
PCM1-201ENST00000325083 IBSPP21815 317 aaPredicted RBP16.9■□□□□ 0.3
PCM1-201ENST00000325083 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
PCM1-201ENST00000325083 CENPHQ9H3R5 247 aa16.9■□□□□ 0.3
PCM1-201ENST00000325083 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
PCM1-201ENST00000325083 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
PCM1-201ENST00000325083 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
PCM1-201ENST00000325083 ERLIN2O94905 339 aa16.89■□□□□ 0.29
PCM1-201ENST00000325083 FAM193AP78312 1265 aa16.88■□□□□ 0.29
PCM1-201ENST00000325083 PSMA5P28066 241 aa16.88■□□□□ 0.29
PCM1-201ENST00000325083 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
PCM1-201ENST00000325083 CCDC97Q96F63 343 aaPredicted RBP16.88■□□□□ 0.29
PCM1-201ENST00000325083 TSPY26PQ9H489 355 aa16.87■□□□□ 0.29
PCM1-201ENST00000325083 TAX1BP1Q86VP1 789 aa16.87■□□□□ 0.29
PCM1-201ENST00000325083 PDCL3Q9H2J4 239 aa16.87■□□□□ 0.29
PCM1-201ENST00000325083 TANGO6Q9C0B7 1094 aa16.87■□□□□ 0.29
PCM1-201ENST00000325083 GOLGA6L10A6NI86 522 aa16.87■□□□□ 0.29
PCM1-201ENST00000325083 SEPT11Q9NVA2 429 aaKnown RBP16.87■□□□□ 0.29
PCM1-201ENST00000325083 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
PCM1-201ENST00000325083 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
PCM1-201ENST00000325083 MATR3P43243 847 aaKnown RBP eCLIP16.86■□□□□ 0.294e-7■■■■□ 19.4
PCM1-201ENST00000325083 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
PCM1-201ENST00000325083 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
PCM1-201ENST00000325083 TXLNAP40222 546 aa16.86■□□□□ 0.29
PCM1-201ENST00000325083 TTC39AQ5SRH9 613 aa16.86■□□□□ 0.29
PCM1-201ENST00000325083 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
PCM1-201ENST00000325083 DEF6Q9H4E7 631 aa16.86■□□□□ 0.29
PCM1-201ENST00000325083 STK3Q13188 491 aa16.85■□□□□ 0.29
PCM1-201ENST00000325083 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
PCM1-201ENST00000325083 CCDC181Q5TID7 509 aa16.85■□□□□ 0.29
PCM1-201ENST00000325083 KINO60870 393 aaKnown RBP16.85■□□□□ 0.29
PCM1-201ENST00000325083 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
PCM1-201ENST00000325083 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
PCM1-201ENST00000325083 ANKRD18AQ8IVF6 992 aa16.84■□□□□ 0.29
PCM1-201ENST00000325083 SERPINC1P01008 464 aa16.84■□□□□ 0.29
PCM1-201ENST00000325083 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
PCM1-201ENST00000325083 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
PCM1-201ENST00000325083 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
PCM1-201ENST00000325083 LETM1O95202 739 aaPredicted RBP16.84■□□□□ 0.29
PCM1-201ENST00000325083 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
PCM1-201ENST00000325083 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.29
PCM1-201ENST00000325083 CDC45O75419 566 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms