RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 KINO60870 393 aaKnown RBP20.27■□□□□ 0.84
SMCHD1-201ENST00000320876 XBP1P17861 261 aa20.27■□□□□ 0.83
SMCHD1-201ENST00000320876 COG3Q96JB2 828 aa20.27■□□□□ 0.83
SMCHD1-201ENST00000320876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.26■□□□□ 0.83
SMCHD1-201ENST00000320876 ERLIN2O94905 339 aa20.26■□□□□ 0.83
SMCHD1-201ENST00000320876 API5Q9BZZ5 524 aaKnown RBP20.26■□□□□ 0.83
SMCHD1-201ENST00000320876 DHX16O60231 1041 aaKnown RBP20.25■□□□□ 0.83
SMCHD1-201ENST00000320876 SDF4Q9BRK5 362 aa20.25■□□□□ 0.83
SMCHD1-201ENST00000320876 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
SMCHD1-201ENST00000320876 HSP90AB4PQ58FF6 505 aa20.25■□□□□ 0.83
SMCHD1-201ENST00000320876 PDCP20941 246 aa20.25■□□□□ 0.83
SMCHD1-201ENST00000320876 RAD21O60216 631 aa20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 TTC5Q8N0Z6 440 aa20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 CUX1P39880 1505 aa20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 TRAK2O60296 914 aa20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 SMC2O95347 1197 aa20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 LTV1Q96GA3 475 aaPredicted RBP20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 CT47B1P0C2W7 299 aaPredicted RBP20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 CAVIN1Q6NZI2 390 aaKnown RBP20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 INCENPQ9NQS7 918 aa20.24■□□□□ 0.83
SMCHD1-201ENST00000320876 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
SMCHD1-201ENST00000320876 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
SMCHD1-201ENST00000320876 CDC45O75419 566 aa20.23■□□□□ 0.83
SMCHD1-201ENST00000320876 USP8P40818 1118 aa20.23■□□□□ 0.83
SMCHD1-201ENST00000320876 TEFQ10587 303 aa20.22■□□□□ 0.83
SMCHD1-201ENST00000320876 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
SMCHD1-201ENST00000320876 MCM2P49736 904 aa20.22■□□□□ 0.83
SMCHD1-201ENST00000320876 EFCAB2Q5VUJ9 269 aa20.22■□□□□ 0.83
SMCHD1-201ENST00000320876 EIF3JO75822 258 aaKnown RBP20.21■□□□□ 0.83
SMCHD1-201ENST00000320876 TXLNBQ8N3L3 684 aa20.21■□□□□ 0.83
SMCHD1-201ENST00000320876 FILIP1LQ4L180 1135 aa20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 KRI1Q8N9T8 703 aaKnown RBP20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 TTLL5Q6EMB2 1281 aa20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 ZFYVE27Q5T4F4 411 aa20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 RRP9O43818 475 aaKnown RBP20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 IQCEQ6IPM2 695 aa20.2■□□□□ 0.82
SMCHD1-201ENST00000320876 MAGEC2Q9UBF1 373 aaPredicted RBP20.19■□□□□ 0.82
SMCHD1-201ENST00000320876 PLCD4Q9BRC7 762 aa20.19■□□□□ 0.82
SMCHD1-201ENST00000320876 LUC7LQ9NQ29 371 aaKnown RBP20.19■□□□□ 0.82
SMCHD1-201ENST00000320876 FOSBP53539 338 aa20.18■□□□□ 0.82
SMCHD1-201ENST00000320876 RNF214Q8ND24 703 aa20.18■□□□□ 0.82
SMCHD1-201ENST00000320876 ANKRD18AQ8IVF6 992 aa20.18■□□□□ 0.82
SMCHD1-201ENST00000320876 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
SMCHD1-201ENST00000320876 ERLIN1O75477 346 aa20.17■□□□□ 0.82
SMCHD1-201ENST00000320876 WASHC2CQ9Y4E1 1318 aa20.17■□□□□ 0.82
SMCHD1-201ENST00000320876 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
SMCHD1-201ENST00000320876 DHX57Q6P158 1386 aaKnown RBP20.16■□□□□ 0.82
SMCHD1-201ENST00000320876 TXLNAP40222 546 aa20.16■□□□□ 0.82
SMCHD1-201ENST00000320876 ZNF396Q96N95 335 aaPredicted RBP20.16■□□□□ 0.82
SMCHD1-201ENST00000320876 ZNHIT6Q9NWK9 470 aaKnown RBP20.16■□□□□ 0.82
SMCHD1-201ENST00000320876 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
SMCHD1-201ENST00000320876 CCDC192P0DO97 292 aa20.15■□□□□ 0.82
SMCHD1-201ENST00000320876 RABEP1Q15276 862 aa20.15■□□□□ 0.82
SMCHD1-201ENST00000320876 DEF6Q9H4E7 631 aa20.15■□□□□ 0.82
SMCHD1-201ENST00000320876 KIF3BO15066 747 aa20.15■□□□□ 0.82
SMCHD1-201ENST00000320876 SEPT7Q16181 437 aaKnown RBP20.15■□□□□ 0.82
SMCHD1-201ENST00000320876 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.82
SMCHD1-201ENST00000320876 SART3Q15020 963 aaKnown RBP20.14■□□□□ 0.81
SMCHD1-201ENST00000320876 ENOX2Q16206 610 aaKnown RBP20.14■□□□□ 0.81
SMCHD1-201ENST00000320876 RIPK4P57078 832 aa20.14■□□□□ 0.81
SMCHD1-201ENST00000320876 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
SMCHD1-201ENST00000320876 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
SMCHD1-201ENST00000320876 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
SMCHD1-201ENST00000320876 CCDC112Q8NEF3 446 aa20.13■□□□□ 0.81
SMCHD1-201ENST00000320876 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
SMCHD1-201ENST00000320876 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
SMCHD1-201ENST00000320876 HIP1O00291 1037 aa20.12■□□□□ 0.81
SMCHD1-201ENST00000320876 SYCP1Q15431 976 aa20.12■□□□□ 0.81
SMCHD1-201ENST00000320876 MIA2Q96PC5 1412 aa20.12■□□□□ 0.81
SMCHD1-201ENST00000320876 APAF1O14727 1248 aa20.12■□□□□ 0.81
SMCHD1-201ENST00000320876 DYDC1Q8WWB3 177 aa20.12■□□□□ 0.81
SMCHD1-201ENST00000320876 UQCRHLA0A096LP55 91 aa20.11■□□□□ 0.81
SMCHD1-201ENST00000320876 UQCRHP07919 91 aa20.11■□□□□ 0.81
SMCHD1-201ENST00000320876 DIAPH1O60610 1272 aaKnown RBP20.11■□□□□ 0.81
SMCHD1-201ENST00000320876 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
SMCHD1-201ENST00000320876 SKIDA1Q1XH10 827 aa20.11■□□□□ 0.81
SMCHD1-201ENST00000320876 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
SMCHD1-201ENST00000320876 RBM10P98175 930 aaKnown RBP20.1■□□□□ 0.81
SMCHD1-201ENST00000320876 GNAI1P63096 354 aa20.1■□□□□ 0.81
SMCHD1-201ENST00000320876 SPC24Q8NBT2 197 aa20.1■□□□□ 0.81
SMCHD1-201ENST00000320876 CDK5RAP3Q96JB5 506 aa20.09■□□□□ 0.81
SMCHD1-201ENST00000320876 CWC22Q9HCG8 908 aaKnown RBP20.09■□□□□ 0.81
SMCHD1-201ENST00000320876 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
SMCHD1-201ENST00000320876 NEFHP12036 1026 aa20.09■□□□□ 0.81
SMCHD1-201ENST00000320876 DACH1Q9UI36 760 aa20.09■□□□□ 0.81
SMCHD1-201ENST00000320876 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
SMCHD1-201ENST00000320876 CCDC181Q5TID7 509 aa20.08■□□□□ 0.81
SMCHD1-201ENST00000320876 EZRP15311 586 aaKnown RBP20.08■□□□□ 0.8
SMCHD1-201ENST00000320876 PPFIBP1Q86W92 1011 aa20.08■□□□□ 0.8
SMCHD1-201ENST00000320876 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
SMCHD1-201ENST00000320876 PRPF40AO75400 957 aaKnown RBP20.07■□□□□ 0.8
SMCHD1-201ENST00000320876 STIM1Q13586 685 aa20.07■□□□□ 0.8
SMCHD1-201ENST00000320876 SERPINC1P01008 464 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms