RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 MST1RQ04912 1400 aa18.15■□□□□ 0.5
SGCE-201ENST00000265735 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
SGCE-201ENST00000265735 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
SGCE-201ENST00000265735 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
SGCE-201ENST00000265735 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
SGCE-201ENST00000265735 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
SGCE-201ENST00000265735 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
SGCE-201ENST00000265735 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
SGCE-201ENST00000265735 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.49
SGCE-201ENST00000265735 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
SGCE-201ENST00000265735 TRPM1Q7Z4N2 1603 aa18.08■□□□□ 0.48
SGCE-201ENST00000265735 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
SGCE-201ENST00000265735 FMN2Q9NZ56 1722 aa18.06■□□□□ 0.48
SGCE-201ENST00000265735 TONSLQ96HA7 1378 aa18.06■□□□□ 0.48
SGCE-201ENST00000265735 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
SGCE-201ENST00000265735 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
SGCE-201ENST00000265735 ADGRB2O60241 1585 aa18.05■□□□□ 0.48
SGCE-201ENST00000265735 POGKQ9P215 609 aa18.05■□□□□ 0.48
SGCE-201ENST00000265735 NBPF8Q3BBV2 869 aa18.03■□□□□ 0.48
SGCE-201ENST00000265735 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
SGCE-201ENST00000265735 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
SGCE-201ENST00000265735 ORAI2Q96SN7 254 aa18.03■□□□□ 0.48
SGCE-201ENST00000265735 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
SGCE-201ENST00000265735 GPRASP1Q5JY77 1395 aa17.99■□□□□ 0.47
SGCE-201ENST00000265735 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
SGCE-201ENST00000265735 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
SGCE-201ENST00000265735 MINK1Q8N4C8 1332 aaPredicted RBP17.97■□□□□ 0.47
SGCE-201ENST00000265735 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
SGCE-201ENST00000265735 ESCO1Q5FWF5 840 aa17.97■□□□□ 0.47
SGCE-201ENST00000265735 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
SGCE-201ENST00000265735 HIRIP3Q9BW71 556 aaPredicted RBP17.96■□□□□ 0.47
SGCE-201ENST00000265735 TIMELESSQ9UNS1 1208 aa17.96■□□□□ 0.47
SGCE-201ENST00000265735 JCADQ9P266 1359 aa17.96■□□□□ 0.47
SGCE-201ENST00000265735 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.47
SGCE-201ENST00000265735 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
SGCE-201ENST00000265735 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
SGCE-201ENST00000265735 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
SGCE-201ENST00000265735 RALGAPBQ86X10 1494 aa17.96■□□□□ 0.47
SGCE-201ENST00000265735 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.47
SGCE-201ENST00000265735 KIF1AQ12756 1690 aa17.95■□□□□ 0.46
SGCE-201ENST00000265735 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
SGCE-201ENST00000265735 TULP4Q9NRJ4 1543 aa17.94■□□□□ 0.46
SGCE-201ENST00000265735 CENPJQ9HC77 1338 aaPredicted RBP17.94■□□□□ 0.46
SGCE-201ENST00000265735 EIF3AQ14152 1382 aaKnown RBP17.93■□□□□ 0.46
SGCE-201ENST00000265735 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
SGCE-201ENST00000265735 LRRC59Q96AG4 307 aaKnown RBP17.93■□□□□ 0.46
SGCE-201ENST00000265735 NPHP3Q7Z494 1330 aa17.92■□□□□ 0.46
SGCE-201ENST00000265735 PXDNQ92626 1479 aa17.92■□□□□ 0.46
SGCE-201ENST00000265735 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
SGCE-201ENST00000265735 FOXO3O43524 673 aa17.91■□□□□ 0.46
SGCE-201ENST00000265735 PHF8Q9UPP1 1060 aa17.9■□□□□ 0.46
SGCE-201ENST00000265735 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.46
SGCE-201ENST00000265735 ATP7BP35670 1465 aa17.89■□□□□ 0.45
SGCE-201ENST00000265735 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
SGCE-201ENST00000265735 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
SGCE-201ENST00000265735 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
SGCE-201ENST00000265735 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
SGCE-201ENST00000265735 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
SGCE-201ENST00000265735 TOPAZ1Q8N9V7 1692 aa17.86■□□□□ 0.45
SGCE-201ENST00000265735 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
SGCE-201ENST00000265735 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
SGCE-201ENST00000265735 LRP6O75581 1613 aa17.85■□□□□ 0.45
SGCE-201ENST00000265735 COL22A1Q8NFW1 1626 aaPredicted RBP17.85■□□□□ 0.45
SGCE-201ENST00000265735 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
SGCE-201ENST00000265735 PMFBP1Q8TBY8 1022 aa17.84■□□□□ 0.45
SGCE-201ENST00000265735 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.45
SGCE-201ENST00000265735 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.45
SGCE-201ENST00000265735 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.45
SGCE-201ENST00000265735 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
SGCE-201ENST00000265735 SBNO1A3KN83 1393 aa17.81■□□□□ 0.44
SGCE-201ENST00000265735 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
SGCE-201ENST00000265735 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
SGCE-201ENST00000265735 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
SGCE-201ENST00000265735 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
SGCE-201ENST00000265735 PSME1Q06323 249 aa17.8■□□□□ 0.44
SGCE-201ENST00000265735 CABP2Q9NPB3 220 aa17.8■□□□□ 0.44
SGCE-201ENST00000265735 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
SGCE-201ENST00000265735 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
SGCE-201ENST00000265735 RGS17Q9UGC6 210 aaPredicted RBP17.79■□□□□ 0.44
SGCE-201ENST00000265735 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
SGCE-201ENST00000265735 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.43
SGCE-201ENST00000265735 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.43
SGCE-201ENST00000265735 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.43
SGCE-201ENST00000265735 ALS2Q96Q42 1657 aa17.76■□□□□ 0.43
SGCE-201ENST00000265735 ACEP12821 1306 aa17.76■□□□□ 0.43
SGCE-201ENST00000265735 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
SGCE-201ENST00000265735 ST20-MTHFSA0A0A6YYL1 179 aa17.76■□□□□ 0.43
SGCE-201ENST00000265735 TESK2Q96S53 571 aa17.76■□□□□ 0.43
SGCE-201ENST00000265735 USP47Q96K76 1375 aa17.74■□□□□ 0.43
SGCE-201ENST00000265735 ARHGEF10O15013 1369 aa17.74■□□□□ 0.43
SGCE-201ENST00000265735 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
SGCE-201ENST00000265735 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
SGCE-201ENST00000265735 ILDR2Q71H61 639 aa17.73■□□□□ 0.43
SGCE-201ENST00000265735 PUS7Q96PZ0 661 aaKnown RBP17.73■□□□□ 0.43
SGCE-201ENST00000265735 MARF1Q9Y4F3 1742 aaKnown RBP17.73■□□□□ 0.43
SGCE-201ENST00000265735 ATAD2Q6PL18 1390 aa17.72■□□□□ 0.43
SGCE-201ENST00000265735 SLC24A1O60721 1099 aa17.72■□□□□ 0.43
SGCE-201ENST00000265735 ABCA3Q99758 1704 aa17.71■□□□□ 0.42
SGCE-201ENST00000265735 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
SGCE-201ENST00000265735 ADAMTS2O95450 1211 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms