RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 FAM135AQ9P2D6 1515 aa29.77■■■□□ 2.36
CCM2L-201ENST00000262659 SASS6Q6UVJ0 657 aa29.77■■■□□ 2.36
CCM2L-201ENST00000262659 PDLIM2Q96JY6 352 aa29.77■■■□□ 2.36
CCM2L-201ENST00000262659 CSPP1Q1MSJ5 1256 aa29.76■■■□□ 2.35
CCM2L-201ENST00000262659 ZKSCAN5Q9Y2L8 839 aa29.76■■■□□ 2.35
CCM2L-201ENST00000262659 WWC1Q8IX03 1113 aa29.75■■■□□ 2.35
CCM2L-201ENST00000262659 ADAMTS12P58397 1594 aa29.74■■■□□ 2.35
CCM2L-201ENST00000262659 GOLGA6L22H0YM25 854 aa29.74■■■□□ 2.35
CCM2L-201ENST00000262659 RBSNQ9H1K0 784 aa29.74■■■□□ 2.35
CCM2L-201ENST00000262659 GTF2E1P29083 439 aaPredicted RBP29.73■■■□□ 2.35
CCM2L-201ENST00000262659 ZNF445P59923 1031 aa29.73■■■□□ 2.35
CCM2L-201ENST00000262659 CD2BP2O95400 341 aaKnown RBP29.72■■■□□ 2.35
CCM2L-201ENST00000262659 LAMC1P11047 1609 aa29.71■■■□□ 2.35
CCM2L-201ENST00000262659 BAG4O95429 457 aaKnown RBP29.69■■■□□ 2.34
CCM2L-201ENST00000262659 PPP4R3BQ5MIZ7 849 aa29.69■■■□□ 2.34
CCM2L-201ENST00000262659 ZSCAN23Q3MJ62 389 aa29.68■■■□□ 2.34
CCM2L-201ENST00000262659 CAVIN1Q6NZI2 390 aaKnown RBP29.68■■■□□ 2.34
CCM2L-201ENST00000262659 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
CCM2L-201ENST00000262659 A2MP01023 1474 aa29.67■■■□□ 2.34
CCM2L-201ENST00000262659 GPATCH8Q9UKJ3 1502 aaKnown RBP29.67■■■□□ 2.34
CCM2L-201ENST00000262659 NUP153P49790 1475 aaKnown RBP29.67■■■□□ 2.34
CCM2L-201ENST00000262659 NCLP19338 710 aaKnown RBP29.67■■■□□ 2.34
CCM2L-201ENST00000262659 JARID2Q92833 1246 aaPredicted RBP29.67■■■□□ 2.34
CCM2L-201ENST00000262659 STAC3Q96MF2 364 aa29.67■■■□□ 2.34
CCM2L-201ENST00000262659 ITSN2Q9NZM3 1697 aa29.66■■■□□ 2.34
CCM2L-201ENST00000262659 CLEC17AQ6ZS10 378 aa29.66■■■□□ 2.34
CCM2L-201ENST00000262659 NGEFQ8N5V2 710 aa29.66■■■□□ 2.34
CCM2L-201ENST00000262659 KIF2CQ99661 725 aa29.66■■■□□ 2.34
CCM2L-201ENST00000262659 PRG4Q92954 1404 aaPredicted RBP29.66■■■□□ 2.34
CCM2L-201ENST00000262659 TNNT2P45379 298 aaPredicted RBP29.66■■■□□ 2.34
CCM2L-201ENST00000262659 ASXL1Q8IXJ9 1541 aa29.65■■■□□ 2.34
CCM2L-201ENST00000262659 PTPRGP23470 1445 aa29.65■■■□□ 2.34
CCM2L-201ENST00000262659 MCM5P33992 734 aa29.65■■■□□ 2.34
CCM2L-201ENST00000262659 CBX1P83916 185 aa29.64■■■□□ 2.34
CCM2L-201ENST00000262659 MVPQ14764 893 aaKnown RBP29.64■■■□□ 2.34
CCM2L-201ENST00000262659 PRIM1P49642 420 aaKnown RBP29.64■■■□□ 2.33
CCM2L-201ENST00000262659 NEUROD2Q15784 382 aa29.64■■■□□ 2.33
CCM2L-201ENST00000262659 BCL11BQ9C0K0 894 aaPredicted RBP29.63■■■□□ 2.33
CCM2L-201ENST00000262659 GAS2L2Q8NHY3 880 aa29.63■■■□□ 2.33
CCM2L-201ENST00000262659 K7ELQ4 463 aaPredicted RBP29.62■■■□□ 2.33
CCM2L-201ENST00000262659 GTPBP4Q9BZE4 634 aaKnown RBP29.62■■■□□ 2.33
CCM2L-201ENST00000262659 DISP1Q96F81 1524 aa29.62■■■□□ 2.33
CCM2L-201ENST00000262659 TSC1Q92574 1164 aa29.61■■■□□ 2.33
CCM2L-201ENST00000262659 KIF20AO95235 890 aa29.6■■■□□ 2.33
CCM2L-201ENST00000262659 MCTP1Q6DN14 999 aa29.6■■■□□ 2.33
CCM2L-201ENST00000262659 KIAA0556O60303 1618 aa29.59■■■□□ 2.33
CCM2L-201ENST00000262659 RBM42Q9BTD8 480 aaKnown RBP29.59■■■□□ 2.33
CCM2L-201ENST00000262659 RRP7AQ9Y3A4 280 aaKnown RBP29.59■■■□□ 2.33
CCM2L-201ENST00000262659 ZNF710Q8N1W2 664 aa29.59■■■□□ 2.33
CCM2L-201ENST00000262659 C9orf84Q5VXU9 1444 aa29.58■■■□□ 2.33
CCM2L-201ENST00000262659 ZBTB7CA1YPR0 619 aa29.58■■■□□ 2.33
CCM2L-201ENST00000262659 AK9Q5TCS8 1911 aa29.58■■■□□ 2.33
CCM2L-201ENST00000262659 MYRIPQ8NFW9 859 aa29.58■■■□□ 2.33
CCM2L-201ENST00000262659 CCDC39Q9UFE4 941 aa29.58■■■□□ 2.33
CCM2L-201ENST00000262659 ADCY10Q96PN6 1610 aa29.57■■■□□ 2.32
CCM2L-201ENST00000262659 RAPGEF6Q8TEU7 1601 aa29.56■■■□□ 2.32
CCM2L-201ENST00000262659 TROQ12816 1431 aaPredicted RBP29.56■■■□□ 2.32
CCM2L-201ENST00000262659 LMBRD1Q9NUN5 540 aa29.55■■■□□ 2.32
CCM2L-201ENST00000262659 SHROOM2Q13796 1616 aa29.55■■■□□ 2.32
CCM2L-201ENST00000262659 HDAC1Q13547 482 aaPredicted RBP29.54■■■□□ 2.32
CCM2L-201ENST00000262659 ATP2B3Q16720 1220 aa29.54■■■□□ 2.32
CCM2L-201ENST00000262659 ARHGAP31Q2M1Z3 1444 aa29.54■■■□□ 2.32
CCM2L-201ENST00000262659 FTSJ3Q8IY81 847 aaKnown RBP29.53■■■□□ 2.32
CCM2L-201ENST00000262659 LETM1O95202 739 aaPredicted RBP29.53■■■□□ 2.32
CCM2L-201ENST00000262659 NAP1L2Q9ULW6 460 aaPredicted RBP29.52■■■□□ 2.32
CCM2L-201ENST00000262659 RBM27Q9P2N5 1060 aaKnown RBP29.52■■■□□ 2.32
CCM2L-201ENST00000262659 SYNMO15061 1565 aa29.52■■■□□ 2.32
CCM2L-201ENST00000262659 NPC1L1Q9UHC9 1359 aa29.51■■■□□ 2.31
CCM2L-201ENST00000262659 DZIP1LQ8IYY4 767 aaKnown RBP29.51■■■□□ 2.31
CCM2L-201ENST00000262659 EIF2AK4Q9P2K8 1649 aaKnown RBP29.5■■■□□ 2.31
CCM2L-201ENST00000262659 TMEM51Q9NW97 253 aa29.49■■■□□ 2.31
CCM2L-201ENST00000262659 PLA2R1Q13018 1463 aa29.49■■■□□ 2.31
CCM2L-201ENST00000262659 ZKSCAN2Q63HK3 967 aa29.49■■■□□ 2.31
CCM2L-201ENST00000262659 GRIN2AQ12879 1464 aa29.49■■■□□ 2.31
CCM2L-201ENST00000262659 DNTTIP2Q5QJE6 756 aaKnown RBP29.48■■■□□ 2.31
CCM2L-201ENST00000262659 CHMP4BQ9H444 224 aaKnown RBP29.48■■■□□ 2.31
CCM2L-201ENST00000262659 CCDC141Q6ZP82 1450 aa29.48■■■□□ 2.31
CCM2L-201ENST00000262659 KIAA2012Q0VF49 1180 aa29.47■■■□□ 2.31
CCM2L-201ENST00000262659 MYO5CQ9NQX4 1742 aa29.47■■■□□ 2.31
CCM2L-201ENST00000262659 GPT2Q8TD30 523 aa29.46■■■□□ 2.31
CCM2L-201ENST00000262659 TSPY4P0CV99 314 aa29.46■■■□□ 2.31
CCM2L-201ENST00000262659 TSPY10P0CW01 314 aa29.46■■■□□ 2.31
CCM2L-201ENST00000262659 SHANK2Q9UPX8 1470 aa29.45■■■□□ 2.31
CCM2L-201ENST00000262659 LNPKQ9C0E8 428 aa29.45■■■□□ 2.31
CCM2L-201ENST00000262659 FAM177BA6PVY3 158 aa29.45■■■□□ 2.3
CCM2L-201ENST00000262659 CDC42BPAQ5VT25 1732 aa29.44■■■□□ 2.3
CCM2L-201ENST00000262659 NUP160Q12769 1436 aa29.44■■■□□ 2.3
CCM2L-201ENST00000262659 CDCA8Q53HL2 280 aa29.44■■■□□ 2.3
CCM2L-201ENST00000262659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.44■■■□□ 2.3
CCM2L-201ENST00000262659 PRPF40AO75400 957 aaKnown RBP29.43■■■□□ 2.3
CCM2L-201ENST00000262659 PKP1Q13835 747 aa29.43■■■□□ 2.3
CCM2L-201ENST00000262659 TCP11L2Q8N4U5 519 aa29.43■■■□□ 2.3
CCM2L-201ENST00000262659 LRSAM1Q6UWE0 723 aa29.43■■■□□ 2.3
CCM2L-201ENST00000262659 SYCE3A1L190 88 aa29.42■■■□□ 2.3
CCM2L-201ENST00000262659 PDIA4P13667 645 aaKnown RBP29.42■■■□□ 2.3
CCM2L-201ENST00000262659 KIF16BQ96L93 1317 aa29.42■■■□□ 2.3
CCM2L-201ENST00000262659 PTMAP06454 111 aaKnown RBP29.41■■■□□ 2.3
CCM2L-201ENST00000262659 ITPRIPQ8IWB1 547 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 RNF214Q8ND24 703 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 PRIMPOLQ96LW4 560 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms