RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 PDE3AQ14432 1141 aa21.92■■□□□ 1.1
CDK4-201ENST00000257904 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
CDK4-201ENST00000257904 IGHDP01880 384 aa21.91■■□□□ 1.1
CDK4-201ENST00000257904 RTN4Q9NQC3 1192 aaKnown RBP21.91■■□□□ 1.1
CDK4-201ENST00000257904 POLR3AO14802 1390 aaPredicted RBP21.9■■□□□ 1.1
CDK4-201ENST00000257904 CENPJQ9HC77 1338 aaPredicted RBP21.89■■□□□ 1.1
CDK4-201ENST00000257904 KIF1BO60333 1816 aa21.89■■□□□ 1.1
CDK4-201ENST00000257904 FRAT1Q92837 279 aaPredicted RBP21.89■■□□□ 1.09
CDK4-201ENST00000257904 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
CDK4-201ENST00000257904 ADGRF5Q8IZF2 1346 aa21.88■■□□□ 1.09
CDK4-201ENST00000257904 WWC1Q8IX03 1113 aa21.88■■□□□ 1.09
CDK4-201ENST00000257904 CLUAP1Q96AJ1 413 aa21.87■■□□□ 1.09
CDK4-201ENST00000257904 ABCC3O15438 1527 aa21.87■■□□□ 1.09
CDK4-201ENST00000257904 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
CDK4-201ENST00000257904 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
CDK4-201ENST00000257904 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
CDK4-201ENST00000257904 USP19O94966 1318 aa21.86■■□□□ 1.09
CDK4-201ENST00000257904 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
CDK4-201ENST00000257904 NPATQ14207 1427 aa21.86■■□□□ 1.09
CDK4-201ENST00000257904 FRAT2O75474 233 aaPredicted RBP21.85■■□□□ 1.09
CDK4-201ENST00000257904 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
CDK4-201ENST00000257904 CANXP27824 592 aaKnown RBP21.84■■□□□ 1.09
CDK4-201ENST00000257904 BRPF3Q9ULD4 1205 aa21.84■■□□□ 1.09
CDK4-201ENST00000257904 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
CDK4-201ENST00000257904 PANK1Q8TE04 598 aa21.84■■□□□ 1.09
CDK4-201ENST00000257904 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
CDK4-201ENST00000257904 MROH2AA6NES4 1674 aa21.83■■□□□ 1.08
CDK4-201ENST00000257904 CHGAP10645 457 aaKnown RBP21.81■■□□□ 1.08
CDK4-201ENST00000257904 ANO8Q9HCE9 1232 aaPredicted RBP21.81■■□□□ 1.08
CDK4-201ENST00000257904 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
CDK4-201ENST00000257904 IQSEC2Q5JU85 1478 aa21.8■■□□□ 1.08
CDK4-201ENST00000257904 NSD3Q9BZ95 1437 aa21.79■■□□□ 1.08
CDK4-201ENST00000257904 REREQ9P2R6 1566 aa21.79■■□□□ 1.08
CDK4-201ENST00000257904 SETBP1Q9Y6X0 1596 aa21.79■■□□□ 1.08
CDK4-201ENST00000257904 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
CDK4-201ENST00000257904 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
CDK4-201ENST00000257904 SEC24BO95487 1268 aa21.78■■□□□ 1.08
CDK4-201ENST00000257904 RARSP54136 660 aaKnown RBP21.78■■□□□ 1.08
CDK4-201ENST00000257904 AAMPQ13685 434 aa21.78■■□□□ 1.08
CDK4-201ENST00000257904 RUNDC1Q96C34 613 aa21.78■■□□□ 1.08
CDK4-201ENST00000257904 MORC1Q86VD1 984 aa21.77■■□□□ 1.08
CDK4-201ENST00000257904 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
CDK4-201ENST00000257904 ADGRB3O60242 1522 aa21.77■■□□□ 1.08
CDK4-201ENST00000257904 ARHGAP31Q2M1Z3 1444 aa21.77■■□□□ 1.07
CDK4-201ENST00000257904 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
CDK4-201ENST00000257904 AGLP35573 1532 aa21.75■■□□□ 1.07
CDK4-201ENST00000257904 ZMYM3Q14202 1370 aa21.75■■□□□ 1.07
CDK4-201ENST00000257904 NEUROD2Q15784 382 aa21.75■■□□□ 1.07
CDK4-201ENST00000257904 NOS1P29475 1434 aa21.74■■□□□ 1.07
CDK4-201ENST00000257904 SIGLEC1Q9BZZ2 1709 aa21.74■■□□□ 1.07
CDK4-201ENST00000257904 BECN1Q14457 450 aa21.74■■□□□ 1.07
CDK4-201ENST00000257904 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
CDK4-201ENST00000257904 RRP7AQ9Y3A4 280 aaKnown RBP21.74■■□□□ 1.07
CDK4-201ENST00000257904 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
CDK4-201ENST00000257904 USP32Q8NFA0 1604 aa21.72■■□□□ 1.07
CDK4-201ENST00000257904 QRICH2Q9H0J4 1663 aa21.72■■□□□ 1.07
CDK4-201ENST00000257904 TNNT2P45379 298 aaPredicted RBP21.71■■□□□ 1.07
CDK4-201ENST00000257904 PCDHB15Q9Y5E8 787 aa21.71■■□□□ 1.07
CDK4-201ENST00000257904 ARHGEF40Q8TER5 1519 aa21.71■■□□□ 1.07
CDK4-201ENST00000257904 RLBP1P12271 317 aa21.71■■□□□ 1.07
CDK4-201ENST00000257904 SLC12A5Q9H2X9 1139 aa21.71■■□□□ 1.07
CDK4-201ENST00000257904 CCDC27Q2M243 656 aa21.7■■□□□ 1.06
CDK4-201ENST00000257904 PPLO60437 1756 aa21.69■■□□□ 1.06
CDK4-201ENST00000257904 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
CDK4-201ENST00000257904 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
CDK4-201ENST00000257904 TNNQ9UQP3 1299 aa21.68■■□□□ 1.06
CDK4-201ENST00000257904 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
CDK4-201ENST00000257904 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
CDK4-201ENST00000257904 PIK3C2BO00750 1634 aa21.67■■□□□ 1.06
CDK4-201ENST00000257904 MTHFSP49914 203 aa21.67■■□□□ 1.06
CDK4-201ENST00000257904 UPF2Q9HAU5 1272 aaKnown RBP21.67■■□□□ 1.06
CDK4-201ENST00000257904 PDZRN3Q9UPQ7 1066 aa21.67■■□□□ 1.06
CDK4-201ENST00000257904 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
CDK4-201ENST00000257904 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
CDK4-201ENST00000257904 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
CDK4-201ENST00000257904 NCBP3Q53F19 620 aaKnown RBP21.65■■□□□ 1.06
CDK4-201ENST00000257904 TBC1D32Q96NH3 1257 aa21.65■■□□□ 1.06
CDK4-201ENST00000257904 RWDD1Q9H446 243 aaPredicted RBP21.64■■□□□ 1.05
CDK4-201ENST00000257904 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.05
CDK4-201ENST00000257904 SLKQ9H2G2 1235 aaPredicted RBP21.64■■□□□ 1.05
CDK4-201ENST00000257904 MYH16Q9H6N6 1097 aa21.64■■□□□ 1.05
CDK4-201ENST00000257904 IDI1Q13907 227 aa21.62■■□□□ 1.05
CDK4-201ENST00000257904 PREX1Q8TCU6 1659 aa21.62■■□□□ 1.05
CDK4-201ENST00000257904 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
CDK4-201ENST00000257904 POGKQ9P215 609 aa21.62■■□□□ 1.05
CDK4-201ENST00000257904 ADGRB2O60241 1585 aa21.61■■□□□ 1.05
CDK4-201ENST00000257904 NUTM2DQ5VT03 806 aaPredicted RBP21.61■■□□□ 1.05
CDK4-201ENST00000257904 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
CDK4-201ENST00000257904 NSD2O96028 1365 aa21.6■■□□□ 1.05
CDK4-201ENST00000257904 TMEM132EQ6IEE7 984 aa21.6■■□□□ 1.05
CDK4-201ENST00000257904 MLECQ14165 292 aa21.59■■□□□ 1.05
CDK4-201ENST00000257904 TBC1D2Q9BYX2 928 aa21.59■■□□□ 1.05
CDK4-201ENST00000257904 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.05
CDK4-201ENST00000257904 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
CDK4-201ENST00000257904 PUS7Q96PZ0 661 aaKnown RBP21.58■■□□□ 1.05
CDK4-201ENST00000257904 ANKRD36BQ8N2N9 1353 aa21.58■■□□□ 1.04
CDK4-201ENST00000257904 VGFO15240 615 aaPredicted RBP21.57■■□□□ 1.04
CDK4-201ENST00000257904 ZKSCAN2Q63HK3 967 aa21.57■■□□□ 1.04
CDK4-201ENST00000257904 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
CDK4-201ENST00000257904 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms