RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CEP152O94986 1710 aa10.67□□□□□ -0.7
CDC27-201ENST00000066544 KDM5AP29375 1690 aaKnown RBP10.67□□□□□ -0.7
CDC27-201ENST00000066544 RARSP54136 660 aaKnown RBP10.66□□□□□ -0.7
CDC27-201ENST00000066544 NPATQ14207 1427 aa10.66□□□□□ -0.7
CDC27-201ENST00000066544 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
CDC27-201ENST00000066544 MYOM1P52179 1685 aa10.66□□□□□ -0.7
CDC27-201ENST00000066544 FBLN1P23142 703 aa10.66□□□□□ -0.7
CDC27-201ENST00000066544 IDI1Q13907 227 aa10.66□□□□□ -0.7
CDC27-201ENST00000066544 SLKQ9H2G2 1235 aaPredicted RBP10.65□□□□□ -0.7
CDC27-201ENST00000066544 MAP3K4Q9Y6R4 1608 aa10.65□□□□□ -0.7
CDC27-201ENST00000066544 CD109Q6YHK3 1445 aa10.65□□□□□ -0.7
CDC27-201ENST00000066544 POLR3AO14802 1390 aaPredicted RBP10.65□□□□□ -0.7
CDC27-201ENST00000066544 EVC2Q86UK5 1308 aa10.65□□□□□ -0.71
CDC27-201ENST00000066544 PDE3AQ14432 1141 aa10.65□□□□□ -0.71
CDC27-201ENST00000066544 POGKQ9P215 609 aa10.65□□□□□ -0.71
CDC27-201ENST00000066544 FRAT2O75474 233 aaPredicted RBP10.64□□□□□ -0.71
CDC27-201ENST00000066544 INO80Q9ULG1 1556 aaPredicted RBP10.64□□□□□ -0.71
CDC27-201ENST00000066544 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
CDC27-201ENST00000066544 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
CDC27-201ENST00000066544 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
CDC27-201ENST00000066544 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
CDC27-201ENST00000066544 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
CDC27-201ENST00000066544 MYOM2P54296 1465 aa10.63□□□□□ -0.71
CDC27-201ENST00000066544 MROH1Q8NDA8 1641 aa10.63□□□□□ -0.71
CDC27-201ENST00000066544 SMC4Q9NTJ3 1288 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
CDC27-201ENST00000066544 EXOSC9Q06265 439 aaKnown RBP10.62□□□□□ -0.71
CDC27-201ENST00000066544 DEPDC5O75140 1603 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 ZNF518AQ6AHZ1 1483 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDC27-201ENST00000066544 PDZRN3Q9UPQ7 1066 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 MROH2AA6NES4 1674 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
CDC27-201ENST00000066544 PRAM1Q96QH2 718 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 KIF1BO60333 1816 aa10.62□□□□□ -0.71
CDC27-201ENST00000066544 VWDEQ8N2E2 1590 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 USP35Q9P2H5 1018 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 ARAP3Q8WWN8 1544 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 MLECQ14165 292 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 ARXQ96QS3 562 aa10.61□□□□□ -0.71
CDC27-201ENST00000066544 ABCA9Q8IUA7 1624 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 KIDINS220Q9ULH0 1771 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 ITPRIPQ8IWB1 547 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 BRPF3Q9ULD4 1205 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 SBNO2Q9Y2G9 1366 aa10.6□□□□□ -0.71
CDC27-201ENST00000066544 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
CDC27-201ENST00000066544 GSE1Q14687 1217 aa10.59□□□□□ -0.71
CDC27-201ENST00000066544 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
CDC27-201ENST00000066544 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
CDC27-201ENST00000066544 RIPK4P57078 832 aa10.58□□□□□ -0.72
CDC27-201ENST00000066544 DZIP1LQ8IYY4 767 aaKnown RBP10.58□□□□□ -0.72
CDC27-201ENST00000066544 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
CDC27-201ENST00000066544 SSH1Q8WYL5 1049 aa10.58□□□□□ -0.72
CDC27-201ENST00000066544 USP19O94966 1318 aa10.58□□□□□ -0.72
CDC27-201ENST00000066544 TMPOP42166 694 aaKnown RBP10.58□□□□□ -0.72
CDC27-201ENST00000066544 RWDD1Q9H446 243 aaPredicted RBP10.58□□□□□ -0.72
CDC27-201ENST00000066544 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
CDC27-201ENST00000066544 A0A1W2PP64 1363 aa10.57□□□□□ -0.72
CDC27-201ENST00000066544 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
CDC27-201ENST00000066544 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
CDC27-201ENST00000066544 FYB1O15117 783 aa10.57□□□□□ -0.72
CDC27-201ENST00000066544 POGZQ7Z3K3 1410 aa10.57□□□□□ -0.72
CDC27-201ENST00000066544 HMOX1P09601 288 aa10.57□□□□□ -0.72
CDC27-201ENST00000066544 UPF2Q9HAU5 1272 aaKnown RBP10.57□□□□□ -0.72
CDC27-201ENST00000066544 WAPLQ7Z5K2 1190 aa10.57□□□□□ -0.72
CDC27-201ENST00000066544 ADGRB3O60242 1522 aa10.56□□□□□ -0.72
CDC27-201ENST00000066544 ANKRD36BQ8N2N9 1353 aa10.56□□□□□ -0.72
CDC27-201ENST00000066544 MVPQ14764 893 aaKnown RBP10.56□□□□□ -0.72
CDC27-201ENST00000066544 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
CDC27-201ENST00000066544 MFAP1P55081 439 aaKnown RBP10.56□□□□□ -0.72
CDC27-201ENST00000066544 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
CDC27-201ENST00000066544 TRIM27P14373 513 aa10.56□□□□□ -0.72
CDC27-201ENST00000066544 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
CDC27-201ENST00000066544 KIAA1210Q9ULL0 1709 aa10.55□□□□□ -0.72
CDC27-201ENST00000066544 NOB1Q9ULX3 412 aaKnown RBP10.55□□□□□ -0.72
CDC27-201ENST00000066544 NRXN1Q9ULB1 1477 aa10.55□□□□□ -0.72
CDC27-201ENST00000066544 CDK19Q9BWU1 502 aa10.55□□□□□ -0.72
CDC27-201ENST00000066544 ADGRB1O14514 1584 aa10.55□□□□□ -0.72
CDC27-201ENST00000066544 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
CDC27-201ENST00000066544 TRIM35Q9UPQ4 493 aa10.55□□□□□ -0.72
CDC27-201ENST00000066544 BECN1Q14457 450 aa10.54□□□□□ -0.72
CDC27-201ENST00000066544 HDGFL2Q7Z4V5 671 aaPredicted RBP10.54□□□□□ -0.72
CDC27-201ENST00000066544 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
CDC27-201ENST00000066544 TMEM57Q8N5G2 664 aa10.53□□□□□ -0.72
CDC27-201ENST00000066544 PRKAR2BP31323 418 aa10.53□□□□□ -0.72
CDC27-201ENST00000066544 YEATS2Q9ULM3 1422 aa10.53□□□□□ -0.72
CDC27-201ENST00000066544 FRMPD1Q5SYB0 1578 aa10.53□□□□□ -0.72
CDC27-201ENST00000066544 ABCC3O15438 1527 aa10.53□□□□□ -0.72
CDC27-201ENST00000066544 TULP4Q9NRJ4 1543 aa10.53□□□□□ -0.72
CDC27-201ENST00000066544 CCDC27Q2M243 656 aa10.52□□□□□ -0.72
CDC27-201ENST00000066544 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.72
CDC27-201ENST00000066544 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.72
CDC27-201ENST00000066544 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
CDC27-201ENST00000066544 LNPKQ9C0E8 428 aa10.52□□□□□ -0.73
CDC27-201ENST00000066544 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
CDC27-201ENST00000066544 ATF7IPQ6VMQ6 1270 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms