RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C YOR314WQ12506 109 aa3.19□□□□□ -1.9
CDC42YLR229C TEL1P38110 2787 aa3.19□□□□□ -1.9
CDC42YLR229C YPR010C-AA5Z2X5 72 aa3.18□□□□□ -1.9
CDC42YLR229C SFT1P43682 97 aa3.18□□□□□ -1.9
CDC42YLR229C ATP20Q12233 115 aa3.18□□□□□ -1.9
CDC42YLR229C YOR034C-AQ3E735 80 aa3.18□□□□□ -1.9
CDC42YLR229C YGR240C-AQ3E786 66 aa3.18□□□□□ -1.9
CDC42YLR229C UBC4P15731 148 aa3.17□□□□□ -1.9
CDC42YLR229C ERG28P40030 148 aa3.17□□□□□ -1.9
CDC42YLR229C RPL38P49167 78 aaKnown RBP3.17□□□□□ -1.9
CDC42YLR229C YGR164WP53291 111 aa3.17□□□□□ -1.9
CDC42YLR229C MPC3P53311 146 aa3.17□□□□□ -1.9
CDC42YLR229C YDR182W-AQ3E796 67 aa3.16□□□□□ -1.9
CDC42YLR229C YAL065CO13511 128 aa3.15□□□□□ -1.91
CDC42YLR229C YBR219CP38317 127 aa3.15□□□□□ -1.91
CDC42YLR229C GAT4P40569 121 aa3.15□□□□□ -1.91
CDC42YLR229C MVB12P42939 101 aa3.15□□□□□ -1.91
CDC42YLR229C YBL039W-BP0C268 59 aa3.14□□□□□ -1.91
CDC42YLR229C YCR001WP25347 104 aa3.14□□□□□ -1.91
CDC42YLR229C RSM18P40033 138 aa3.14□□□□□ -1.91
CDC42YLR229C YFL019CP43576 117 aa3.14□□□□□ -1.91
CDC42YLR229C SMD1Q02260 146 aaPredicted RBP3.14□□□□□ -1.91
CDC42YLR229C RPL36BO14455 100 aaKnown RBP3.13□□□□□ -1.91
CDC42YLR229C RPL36AP05745 100 aaPredicted RBP3.13□□□□□ -1.91
CDC42YLR229C YFR009W-AP0C5M9 85 aa3.13□□□□□ -1.91
CDC42YLR229C AQY2P0CD90 149 aa3.13□□□□□ -1.91
CDC42YLR229C FYV5P25585 152 aa3.12□□□□□ -1.91
CDC42YLR229C COX23P38824 151 aa3.12□□□□□ -1.91
CDC42YLR229C KSH1Q8TGJ3 72 aa3.12□□□□□ -1.91
CDC42YLR229C EDC2P40023 145 aaPredicted RBP3.11□□□□□ -1.91
CDC42YLR229C RPC10P40422 70 aa3.11□□□□□ -1.91
CDC42YLR229C EDC1P53080 175 aaPredicted RBP3.11□□□□□ -1.91
CDC42YLR229C RDS3Q06835 107 aaPredicted RBP3.11□□□□□ -1.91
CDC42YLR229C YDR246W-AQ3E763 66 aa3.11□□□□□ -1.91
CDC42YLR229C SPC1P46965 94 aa3.1□□□□□ -1.91
CDC42YLR229C ICS3P47034 131 aa3.1□□□□□ -1.91
CDC42YLR229C SGF11Q03067 99 aa3.1□□□□□ -1.91
CDC42YLR229C YKL065W-AQ2V2P2 73 aa3.1□□□□□ -1.91
CDC42YLR229C YJL127C-BQ3E828 52 aa3.09□□□□□ -1.91
CDC42YLR229C NOP10Q6Q547 58 aaPredicted RBP3.09□□□□□ -1.91
CDC42YLR229C HHF1P02309 103 aaKnown RBP3.08□□□□□ -1.92
CDC42YLR229C YBR230W-AQ3E762 66 aa3.08□□□□□ -1.92
CDC42YLR229C YMR230W-AQ3E7B5 62 aa3.08□□□□□ -1.92
CDC42YLR229C YNL277W-AQ3E7Z0 62 aa3.08□□□□□ -1.92
CDC42YLR229C YNL042W-BQ3E7Z2 85 aa3.08□□□□□ -1.92
CDC42YLR229C YHR213W-BQ8TGK1 99 aa3.08□□□□□ -1.92
CDC42YLR229C YMR320WQ04897 101 aa3.07□□□□□ -1.92
CDC42YLR229C YHL005CP38752 130 aa3.06□□□□□ -1.92
CDC42YLR229C YIL102CP40488 101 aa3.06□□□□□ -1.92
CDC42YLR229C YLR162WQ06235 118 aa3.06□□□□□ -1.92
CDC42YLR229C YGL041C-BQ3E750 60 aa3.06□□□□□ -1.92
CDC42YLR229C YOR381W-AQ3E804 55 aa3.06□□□□□ -1.92
CDC42YLR229C Q0032Q9ZZX7 96 aa3.06□□□□□ -1.92
CDC42YLR229C YAR023CD6VPM8 179 aa3.05□□□□□ -1.92
CDC42YLR229C RPL33AP05744 107 aaKnown RBP3.05□□□□□ -1.92
CDC42YLR229C YAL064WP39711 94 aa3.05□□□□□ -1.92
CDC42YLR229C RPL33BP41056 107 aaKnown RBP3.05□□□□□ -1.92
CDC42YLR229C YJL133C-AQ3E7A3 74 aa3.05□□□□□ -1.92
CDC42YLR229C YLR307C-AQ3E825 87 aa3.05□□□□□ -1.92
CDC42YLR229C TDA8Q6B2U8 126 aa3.05□□□□□ -1.92
CDC42YLR229C SPT4P32914 102 aaPredicted RBP3.04□□□□□ -1.92
CDC42YLR229C PEX22P39718 180 aa3.04□□□□□ -1.92
CDC42YLR229C LIP1Q03579 150 aa3.04□□□□□ -1.92
CDC42YLR229C HUB1Q6Q546 73 aa3.04□□□□□ -1.92
CDC42YLR229C YOL166W-AQ8TGJ1 51 aa3.04□□□□□ -1.92
CDC42YLR229C YGR121W-AQ3E816 71 aa3.03□□□□□ -1.92
CDC42YLR229C RTC6O14464 93 aa3.02□□□□□ -1.93
CDC42YLR229C RPS30AP0CX33 63 aaKnown RBP3.02□□□□□ -1.93
CDC42YLR229C RPS30BP0CX34 63 aaKnown RBP3.02□□□□□ -1.93
CDC42YLR229C AUA1P32450 94 aa3.02□□□□□ -1.93
CDC42YLR229C ECM19Q06011 112 aa3.02□□□□□ -1.93
CDC42YLR229C YOL014WQ08110 124 aa3.02□□□□□ -1.93
CDC42YLR229C DDR2P89113 61 aa3.01□□□□□ -1.93
CDC42YLR229C YDR115WQ04598 105 aa3.01□□□□□ -1.93
CDC42YLR229C YOR072WQ08486 104 aa3.01□□□□□ -1.93
CDC42YLR229C YER078W-AQ3E7A2 54 aa3.01□□□□□ -1.93
CDC42YLR229C YLL066W-BQ8TGJ7 56 aa3.01□□□□□ -1.93
CDC42YLR229C OST5Q92316 86 aa3.01□□□□□ -1.93
CDC42YLR229C YBL081WP38180 368 aaKnown RBP3□□□□□ -1.93
CDC42YLR229C IGD1P43598 195 aa3□□□□□ -1.93
CDC42YLR229C SNA2P56508 79 aa3□□□□□ -1.93
CDC42YLR229C YMR122CQ03879 124 aa3□□□□□ -1.93
CDC42YLR229C SDH6Q3E785 79 aa2.99□□□□□ -1.93
CDC42YLR229C RRT15Q3E811 62 aa2.99□□□□□ -1.93
CDC42YLR229C YOL013W-AP0C272 63 aaPredicted RBP2.98□□□□□ -1.93
CDC42YLR229C YEL045CP32616 141 aa2.98□□□□□ -1.93
CDC42YLR229C YOR268CQ08734 132 aa2.98□□□□□ -1.93
CDC42YLR229C YER188C-AP0C0V2 99 aa2.97□□□□□ -1.93
CDC42YLR229C YAR064WP39563 99 aa2.97□□□□□ -1.93
CDC42YLR229C BSC4P53841 131 aa2.97□□□□□ -1.93
CDC42YLR229C MIC10Q96VH5 97 aa2.97□□□□□ -1.93
CDC42YLR229C YLR157W-DP0CE99 70 aa2.96□□□□□ -1.94
CDC42YLR229C MMS2P53152 137 aa2.96□□□□□ -1.94
CDC42YLR229C YHR007C-AQ07074 71 aa2.96□□□□□ -1.94
CDC42YLR229C YGL193CP53097 103 aa2.95□□□□□ -1.94
CDC42YLR229C YCR095W-AQ3E787 52 aa2.95□□□□□ -1.94
CDC42YLR229C NUM1Q00402 2748 aa2.94□□□□□ -1.94
CDC42YLR229C YHR125WP38831 101 aa2.94□□□□□ -1.94
CDC42YLR229C YPR153WQ06537 140 aa2.94□□□□□ -1.94
CDC42YLR229C YMR001C-AQ8TGS9 76 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms