RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W RPL26AP05743 127 aaKnown RBP3.45□□□□□ -1.86
MSH1YHR120W YFR009W-AP0C5M9 85 aa3.45□□□□□ -1.86
MSH1YHR120W AQY2P0CD90 149 aa3.45□□□□□ -1.86
MSH1YHR120W SFT1P43682 97 aa3.45□□□□□ -1.86
MSH1YHR120W RPL26BP53221 127 aaKnown RBP3.45□□□□□ -1.86
MSH1YHR120W YBL112CQ3E7Y4 105 aa3.45□□□□□ -1.86
MSH1YHR120W RRT15Q3E811 62 aa3.45□□□□□ -1.86
MSH1YHR120W YHL018WP38744 120 aaPredicted RBP3.45□□□□□ -1.86
MSH1YHR120W YLR307C-AQ3E825 87 aa3.45□□□□□ -1.86
MSH1YHR120W YBL081WP38180 368 aaKnown RBP3.45□□□□□ -1.86
MSH1YHR120W LCL2Q08045 131 aa3.45□□□□□ -1.86
MSH1YHR120W TSC3Q3E790 80 aa3.45□□□□□ -1.86
MSH1YHR120W YDR029WQ12111 104 aa3.44□□□□□ -1.86
MSH1YHR120W ECM12O13529 151 aa3.43□□□□□ -1.86
MSH1YHR120W YAL064WP39711 94 aa3.43□□□□□ -1.86
MSH1YHR120W SMD1Q02260 146 aaPredicted RBP3.43□□□□□ -1.86
MSH1YHR120W YBR230W-AQ3E762 66 aa3.43□□□□□ -1.86
MSH1YHR120W YLR285C-AQ3E771 56 aa3.43□□□□□ -1.86
MSH1YHR120W FYV5P25585 152 aa3.42□□□□□ -1.86
MSH1YHR120W YDR246W-AQ3E763 66 aa3.42□□□□□ -1.86
MSH1YHR120W IGD1P43598 195 aa3.42□□□□□ -1.86
MSH1YHR120W EDC1P53080 175 aaPredicted RBP3.42□□□□□ -1.86
MSH1YHR120W YLR156WP0CE96 114 aa3.41□□□□□ -1.86
MSH1YHR120W YLR159WP0CE97 114 aa3.41□□□□□ -1.86
MSH1YHR120W YLR161WP0CE98 114 aa3.41□□□□□ -1.86
MSH1YHR120W YAR023CD6VPM8 179 aa3.4□□□□□ -1.86
MSH1YHR120W YKL183C-AQ3E765 70 aa3.4□□□□□ -1.86
MSH1YHR120W COX23P38824 151 aa3.4□□□□□ -1.87
MSH1YHR120W YNL042W-BQ3E7Z2 85 aa3.4□□□□□ -1.87
MSH1YHR120W YLR415CO13578 112 aa3.39□□□□□ -1.87
MSH1YHR120W YDR034C-AP0C289 58 aa3.39□□□□□ -1.87
MSH1YHR120W TDA2P40045 126 aa3.39□□□□□ -1.87
MSH1YHR120W YJL127C-BQ3E828 52 aa3.39□□□□□ -1.87
MSH1YHR120W YER187WP40102 141 aa3.39□□□□□ -1.87
MSH1YHR120W YLR361C-AQ3E795 98 aa3.39□□□□□ -1.87
MSH1YHR120W ATP20Q12233 115 aa3.38□□□□□ -1.87
MSH1YHR120W RSM18P40033 138 aa3.38□□□□□ -1.87
MSH1YHR120W ICS3P47034 131 aa3.38□□□□□ -1.87
MSH1YHR120W EDC2P40023 145 aaPredicted RBP3.37□□□□□ -1.87
MSH1YHR120W AIM4P38305 123 aaPredicted RBP3.36□□□□□ -1.87
MSH1YHR120W YDR182W-AQ3E796 67 aa3.36□□□□□ -1.87
MSH1YHR120W BET1P22804 142 aa3.36□□□□□ -1.87
MSH1YHR120W RPL38P49167 78 aaKnown RBP3.36□□□□□ -1.87
MSH1YHR120W YOR314WQ12506 109 aa3.36□□□□□ -1.87
MSH1YHR120W SPT4P32914 102 aaPredicted RBP3.35□□□□□ -1.87
MSH1YHR120W YCR050CP25630 102 aa3.35□□□□□ -1.87
MSH1YHR120W YGL041C-BQ3E750 60 aa3.35□□□□□ -1.87
MSH1YHR120W TDA8Q6B2U8 126 aa3.35□□□□□ -1.87
MSH1YHR120W YHR213W-BQ8TGK1 99 aa3.35□□□□□ -1.87
MSH1YHR120W YOL014WQ08110 124 aa3.34□□□□□ -1.87
MSH1YHR120W Q0032Q9ZZX7 96 aa3.34□□□□□ -1.87
MSH1YHR120W YER039C-AP0CD97 72 aa3.34□□□□□ -1.87
MSH1YHR120W SNA2P56508 79 aa3.34□□□□□ -1.87
MSH1YHR120W YGL193CP53097 103 aa3.33□□□□□ -1.88
MSH1YHR120W HOT13P36078 116 aa3.33□□□□□ -1.88
MSH1YHR120W ECM19Q06011 112 aa3.33□□□□□ -1.88
MSH1YHR120W YJL133C-AQ3E7A3 74 aa3.33□□□□□ -1.88
MSH1YHR120W RPL36BO14455 100 aaKnown RBP3.32□□□□□ -1.88
MSH1YHR120W RPL36AP05745 100 aaPredicted RBP3.32□□□□□ -1.88
MSH1YHR120W NOP10Q6Q547 58 aaPredicted RBP3.32□□□□□ -1.88
MSH1YHR120W YBR182C-AQ8TGU6 64 aa3.32□□□□□ -1.88
MSH1YHR120W YOL166W-AQ8TGJ1 51 aa3.31□□□□□ -1.88
MSH1YHR120W SBH1P52870 82 aa3.31□□□□□ -1.88
MSH1YHR120W YEL045CP32616 141 aa3.3□□□□□ -1.88
MSH1YHR120W LCL1Q02786 101 aa3.3□□□□□ -1.88
MSH1YHR120W YOR072WQ08486 104 aa3.3□□□□□ -1.88
MSH1YHR120W PEX22P39718 180 aa3.29□□□□□ -1.88
MSH1YHR120W YLR162WQ06235 118 aa3.29□□□□□ -1.88
MSH1YHR120W DDR2P89113 61 aa3.29□□□□□ -1.88
MSH1YHR120W MIC10Q96VH5 97 aa3.28□□□□□ -1.88
MSH1YHR120W YJL197C-AP0C5P0 93 aa3.27□□□□□ -1.89
MSH1YHR120W BSC4P53841 131 aa3.27□□□□□ -1.89
MSH1YHR120W YHR007C-AQ07074 71 aa3.27□□□□□ -1.89
MSH1YHR120W YFL067WP43537 175 aa3.26□□□□□ -1.89
MSH1YHR120W MMS2P53152 137 aa3.26□□□□□ -1.89
MSH1YHR120W YGR164WP53291 111 aa3.26□□□□□ -1.89
MSH1YHR120W KTI11Q3E840 82 aa3.26□□□□□ -1.89
MSH1YHR120W YGR121W-AQ3E816 71 aa3.25□□□□□ -1.89
MSH1YHR120W YLR412C-AQ3E742 68 aa3.24□□□□□ -1.89
MSH1YHR120W LIP1Q03579 150 aa3.24□□□□□ -1.89
MSH1YHR120W YOL013W-AP0C272 63 aaPredicted RBP3.23□□□□□ -1.89
MSH1YHR120W YHL005CP38752 130 aa3.23□□□□□ -1.89
MSH1YHR120W KSH1Q8TGJ3 72 aa3.22□□□□□ -1.89
MSH1YHR120W DDR48P18899 430 aaKnown RBP3.22□□□□□ -1.89
MSH1YHR120W SPG1P50088 95 aa3.22□□□□□ -1.89
MSH1YHR120W RPS28BP0C0X0 67 aaKnown RBP3.21□□□□□ -1.9
MSH1YHR120W RPS28AQ3E7X9 67 aaPredicted RBP3.21□□□□□ -1.9
MSH1YHR120W YBR121C-AP0C5L4 52 aa3.21□□□□□ -1.9
MSH1YHR120W YAR064WP39563 99 aa3.21□□□□□ -1.9
MSH1YHR120W RPS30AP0CX33 63 aaKnown RBP3.2□□□□□ -1.9
MSH1YHR120W RPS30BP0CX34 63 aaKnown RBP3.2□□□□□ -1.9
MSH1YHR120W YIL102CP40488 101 aa3.19□□□□□ -1.9
MSH1YHR120W YKL065W-AQ2V2P2 73 aa3.19□□□□□ -1.9
MSH1YHR120W YJR085CP47131 105 aaKnown RBP3.19□□□□□ -1.9
MSH1YHR120W YOL097W-AQ3E7Y9 61 aa3.19□□□□□ -1.9
MSH1YHR120W YMR230W-AQ3E7B5 62 aa3.17□□□□□ -1.9
MSH1YHR120W YDR010CQ12426 110 aa3.16□□□□□ -1.9
MSH1YHR120W HHF1P02309 103 aaKnown RBP3.15□□□□□ -1.9
MSH1YHR120W YLR157W-DP0CE99 70 aa3.15□□□□□ -1.9
MSH1YHR120W YCR043CP25361 127 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms