RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C RPS11BP0CX48 156 aaKnown RBP0.53□□□□□ -2.33
SEC3YER008C YBL071CP38185 102 aa0.53□□□□□ -2.33
SEC3YER008C YHR173CP38864 112 aa0.53□□□□□ -2.33
SEC3YER008C SPI1P40092 148 aa0.53□□□□□ -2.33
SEC3YER008C YNR034W-AQ3E841 98 aa0.53□□□□□ -2.33
SEC3YER008C YCR001WP25347 104 aa0.52□□□□□ -2.33
SEC3YER008C NHP2P32495 156 aaPredicted RBP0.52□□□□□ -2.33
SEC3YER008C YIL156W-BQ2V2P4 73 aa0.52□□□□□ -2.33
SEC3YER008C YCL048W-AQ2V2Q2 79 aa0.52□□□□□ -2.33
SEC3YER008C YLR363W-AQ3E747 85 aa0.52□□□□□ -2.33
SEC3YER008C YGR240C-AQ3E786 66 aa0.52□□□□□ -2.33
SEC3YER008C YCR095W-AQ3E787 52 aa0.52□□□□□ -2.33
SEC3YER008C SIP18P50263 79 aa0.52□□□□□ -2.33
SEC3YER008C YMR105W-AQ8TGS8 64 aa0.52□□□□□ -2.33
SEC3YER008C MRP17P28778 131 aa0.52□□□□□ -2.33
SEC3YER008C SRB6P32570 121 aa0.52□□□□□ -2.33
SEC3YER008C YAR064WP39563 99 aa0.52□□□□□ -2.33
SEC3YER008C MRX7P53869 86 aa0.52□□□□□ -2.33
SEC3YER008C MGR2Q02889 113 aa0.52□□□□□ -2.33
SEC3YER008C PAU8P0CE92 120 aa0.51□□□□□ -2.33
SEC3YER008C PAU11P0CE93 120 aa0.51□□□□□ -2.33
SEC3YER008C TIM12P32830 109 aa0.51□□□□□ -2.33
SEC3YER008C PAU13P38725 120 aa0.51□□□□□ -2.33
SEC3YER008C PAU4P53427 120 aa0.51□□□□□ -2.33
SEC3YER008C PAU10Q03050 120 aa0.51□□□□□ -2.33
SEC3YER008C PAU9Q3E770 120 aa0.51□□□□□ -2.33
SEC3YER008C YOL118CQ08259 102 aa0.51□□□□□ -2.33
SEC3YER008C YGR121W-AQ3E816 71 aa0.51□□□□□ -2.33
SEC3YER008C UTP20P35194 2493 aaKnown RBP0.51□□□□□ -2.33
SEC3YER008C YHR214C-DP0CX93 97 aa0.5□□□□□ -2.33
SEC3YER008C PDX3P38075 228 aaKnown RBP0.5□□□□□ -2.33
SEC3YER008C HUG1Q6Q5K6 68 aa0.5□□□□□ -2.33
SEC3YER008C COX9P07255 59 aa0.5□□□□□ -2.33
SEC3YER008C IRC21Q04772 201 aa0.5□□□□□ -2.33
SEC3YER008C YDL022C-AP0C5L6 82 aa0.49□□□□□ -2.33
SEC3YER008C BPH1P25356 2167 aa0.49□□□□□ -2.33
SEC3YER008C MEC1P38111 2368 aa0.49□□□□□ -2.33
SEC3YER008C YER188C-AP0C0V2 99 aa0.48□□□□□ -2.33
SEC3YER008C YJL009WP47078 108 aa0.48□□□□□ -2.33
SEC3YER008C YGL041C-BQ3E750 60 aa0.48□□□□□ -2.33
SEC3YER008C YHR213W-AQ8TGT4 77 aa0.48□□□□□ -2.33
SEC3YER008C URA2P07259 2214 aaKnown RBP0.48□□□□□ -2.33
SEC3YER008C YFR010W-AP0C5N0 62 aa0.48□□□□□ -2.33
SEC3YER008C PAU1P0CE88 120 aa0.48□□□□□ -2.33
SEC3YER008C PAU14P0CE89 120 aa0.48□□□□□ -2.33
SEC3YER008C TOM6P33448 61 aa0.48□□□□□ -2.33
SEC3YER008C RPL37AP49166 88 aaKnown RBP0.48□□□□□ -2.33
SEC3YER008C YDR381C-AQ3E6R5 114 aa0.48□□□□□ -2.33
SEC3YER008C YDR246W-AQ3E763 66 aa0.48□□□□□ -2.33
SEC3YER008C YPL038W-AQ3E7B4 63 aa0.48□□□□□ -2.33
SEC3YER008C MPC2P38857 129 aa0.47□□□□□ -2.33
SEC3YER008C PAU20Q08322 120 aa0.47□□□□□ -2.33
SEC3YER008C YGR035W-AQ45U48 73 aa0.47□□□□□ -2.33
SEC3YER008C NOP10Q6Q547 58 aaPredicted RBP0.47□□□□□ -2.33
SEC3YER008C SUS1Q6WNK7 96 aa0.47□□□□□ -2.33
SEC3YER008C RPL39P04650 51 aa0.47□□□□□ -2.33
SEC3YER008C MRPL31P14063 131 aaPredicted RBP0.47□□□□□ -2.33
SEC3YER008C HHY1P39982 102 aa0.47□□□□□ -2.33
SEC3YER008C YLL066W-BQ8TGJ7 56 aa0.47□□□□□ -2.33
SEC3YER008C YJR128WP47162 119 aa0.47□□□□□ -2.33
SEC3YER008C HOR7Q05827 59 aa0.47□□□□□ -2.33
SEC3YER008C YAL065CO13511 128 aa0.46□□□□□ -2.34
SEC3YER008C YMR122W-AQ3E842 84 aa0.46□□□□□ -2.34
SEC3YER008C SHU1P38751 150 aa0.46□□□□□ -2.34
SEC3YER008C YDR010CQ12426 110 aa0.46□□□□□ -2.34
SEC3YER008C SWM2P40342 146 aa0.45□□□□□ -2.34
SEC3YER008C BSC4P53841 131 aa0.45□□□□□ -2.34
SEC3YER008C COX12Q01519 83 aa0.45□□□□□ -2.34
SEC3YER008C FPR2P32472 135 aa0.45□□□□□ -2.34
SEC3YER008C SNA2P56508 79 aa0.45□□□□□ -2.34
SEC3YER008C COX19Q3E731 98 aa0.45□□□□□ -2.34
SEC3YER008C YOR034C-AQ3E735 80 aa0.45□□□□□ -2.34
SEC3YER008C YOR314WQ12506 109 aa0.45□□□□□ -2.34
SEC3YER008C LSM2P38203 95 aaKnown RBP0.44□□□□□ -2.34
SEC3YER008C YPR108W-AQ3E7B3 70 aa0.44□□□□□ -2.34
SEC3YER008C YBR292CP38357 123 aa0.44□□□□□ -2.34
SEC3YER008C PAU23Q07987 124 aa0.44□□□□□ -2.34
SEC3YER008C PAU17Q12370 124 aa0.44□□□□□ -2.34
SEC3YER008C YNL190WP53872 204 aa0.44□□□□□ -2.34
SEC3YER008C YMR007WQ03675 126 aa0.44□□□□□ -2.34
SEC3YER008C MHF2Q3E829 80 aa0.43□□□□□ -2.34
SEC3YER008C AIM19P40502 157 aa0.43□□□□□ -2.34
SEC3YER008C MVB12P42939 101 aa0.43□□□□□ -2.34
SEC3YER008C YOR072WQ08486 104 aa0.43□□□□□ -2.34
SEC3YER008C YNL198CP40166 100 aa0.42□□□□□ -2.34
SEC3YER008C YMR141CP40211 102 aa0.42□□□□□ -2.34
SEC3YER008C ERI1P62651 68 aaKnown RBP0.42□□□□□ -2.34
SEC3YER008C YNL042W-BQ3E7Z2 85 aa0.42□□□□□ -2.34
SEC3YER008C YIL102CP40488 101 aa0.42□□□□□ -2.34
SEC3YER008C YOR192C-CQ3E736 78 aa0.42□□□□□ -2.34
SEC3YER008C YBR201C-AQ2V2Q3 67 aa0.41□□□□□ -2.34
SEC3YER008C YGR025WP53216 100 aa0.41□□□□□ -2.34
SEC3YER008C Q0032Q9ZZX7 96 aa0.41□□□□□ -2.34
SEC3YER008C PAI3P01094 68 aa0.4□□□□□ -2.35
SEC3YER008C RPC10P40422 70 aa0.4□□□□□ -2.35
SEC3YER008C RPL37BP51402 88 aaKnown RBP0.4□□□□□ -2.35
SEC3YER008C YGL258W-AQ3E740 77 aa0.4□□□□□ -2.35
SEC3YER008C YFL041W-AQ3E817 63 aa0.4□□□□□ -2.35
SEC3YER008C YLR307C-AQ3E825 87 aa0.4□□□□□ -2.35
SEC3YER008C YHR213W-BQ8TGK1 99 aa0.4□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms