RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX5YDR330W INO4P13902 151 aa2.52□□□□□ -2.01
UBX5YDR330W AIM19P40502 157 aa2.52□□□□□ -2.01
UBX5YDR330W MVB12P42939 101 aa2.52□□□□□ -2.01
UBX5YDR330W KNH1P50112 268 aa2.52□□□□□ -2.01
UBX5YDR330W IRC21Q04772 201 aa2.52□□□□□ -2.01
UBX5YDR330W TSC3Q3E790 80 aa2.52□□□□□ -2.01
UBX5YDR330W YFR032C-BQ8TGU2 87 aa2.52□□□□□ -2.01
UBX5YDR330W YLR236CA0A023PZG4 107 aa2.52□□□□□ -2.01
UBX5YDR330W RTC6O14464 93 aa2.52□□□□□ -2.01
UBX5YDR330W ICY1Q04329 127 aa2.52□□□□□ -2.01
UBX5YDR330W RRT15Q3E811 62 aa2.52□□□□□ -2.01
UBX5YDR330W AQY2P0CD90 149 aa2.51□□□□□ -2.01
UBX5YDR330W YCR085WP25650 117 aa2.51□□□□□ -2.01
UBX5YDR330W YBL039W-BP0C268 59 aa2.5□□□□□ -2.01
UBX5YDR330W PBI2P0CT04 75 aaKnown RBP2.5□□□□□ -2.01
UBX5YDR330W YRA2P36036 203 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
UBX5YDR330W YFL019CP43576 117 aa2.5□□□□□ -2.01
UBX5YDR330W YDR381C-AQ3E6R5 114 aa2.5□□□□□ -2.01
UBX5YDR330W UBC4P15731 148 aa2.49□□□□□ -2.01
UBX5YDR330W YFL065CP43539 102 aa2.49□□□□□ -2.01
UBX5YDR330W MPC3P53311 146 aa2.49□□□□□ -2.01
UBX5YDR330W YPR203WQ08994 102 aa2.49□□□□□ -2.01
UBX5YDR330W YAR023CD6VPM8 179 aa2.48□□□□□ -2.01
UBX5YDR330W YJR107C-AP0CT86 78 aa2.48□□□□□ -2.01
UBX5YDR330W SKI6P46948 246 aaPredicted RBP2.48□□□□□ -2.01
UBX5YDR330W SNA2P56508 79 aa2.47□□□□□ -2.01
UBX5YDR330W EMC6Q12431 108 aa2.47□□□□□ -2.01
UBX5YDR330W YFL041W-AQ3E817 63 aa2.47□□□□□ -2.01
UBX5YDR330W YLR307C-AQ3E825 87 aa2.47□□□□□ -2.01
UBX5YDR330W FYV5P25585 152 aa2.46□□□□□ -2.02
UBX5YDR330W GAT4P40569 121 aa2.46□□□□□ -2.02
UBX5YDR330W SHH4Q06236 168 aa2.46□□□□□ -2.02
UBX5YDR330W YBR230W-AQ3E762 66 aa2.46□□□□□ -2.02
UBX5YDR330W ATP18P81450 59 aa2.45□□□□□ -2.02
UBX5YDR330W YGL041C-BQ3E750 60 aa2.45□□□□□ -2.02
UBX5YDR330W Q0032Q9ZZX7 96 aa2.45□□□□□ -2.02
UBX5YDR330W RAD6P06104 172 aa2.44□□□□□ -2.02
UBX5YDR330W YFR009W-AP0C5M9 85 aa2.44□□□□□ -2.02
UBX5YDR330W YJL127C-BQ3E828 52 aa2.44□□□□□ -2.02
UBX5YDR330W UTP20P35194 2493 aaKnown RBP2.44□□□□□ -2.02
UBX5YDR330W SFT1P43682 97 aa2.43□□□□□ -2.02
UBX5YDR330W YDR029WQ12111 104 aa2.43□□□□□ -2.02
UBX5YDR330W YNL042W-BQ3E7Z2 85 aa2.43□□□□□ -2.02
UBX5YDR330W ECM12O13529 151 aa2.42□□□□□ -2.02
UBX5YDR330W YGL193CP53097 103 aa2.42□□□□□ -2.02
UBX5YDR330W RSM19P53733 91 aaPredicted RBP2.42□□□□□ -2.02
UBX5YDR330W YHL042WP38729 150 aa2.42□□□□□ -2.02
UBX5YDR330W EDC1P53080 175 aaPredicted RBP2.42□□□□□ -2.02
UBX5YDR330W YDR034C-AP0C289 58 aa2.41□□□□□ -2.02
UBX5YDR330W YOL014WQ08110 124 aa2.41□□□□□ -2.02
UBX5YDR330W YML100W-AQ8TGT0 57 aa2.41□□□□□ -2.02
UBX5YDR330W ICS3P47034 131 aa2.4□□□□□ -2.03
UBX5YDR330W DDR2P89113 61 aa2.4□□□□□ -2.03
UBX5YDR330W YDR119W-AQ2V2P9 66 aa2.4□□□□□ -2.03
UBX5YDR330W YLR285C-AQ3E771 56 aa2.4□□□□□ -2.03
UBX5YDR330W YER039C-AP0CD97 72 aa2.39□□□□□ -2.03
UBX5YDR330W YSY6P38374 65 aa2.39□□□□□ -2.03
UBX5YDR330W RPL38P49167 78 aaKnown RBP2.39□□□□□ -2.03
UBX5YDR330W YGR039WP53225 103 aa2.39□□□□□ -2.03
UBX5YDR330W BSC4P53841 131 aa2.39□□□□□ -2.03
UBX5YDR330W COF1Q03048 143 aaKnown RBP2.39□□□□□ -2.03
UBX5YDR330W YHR007C-AQ07074 71 aa2.39□□□□□ -2.03
UBX5YDR330W RPL36BO14455 100 aaKnown RBP2.38□□□□□ -2.03
UBX5YDR330W RSM18P40033 138 aa2.38□□□□□ -2.03
UBX5YDR330W TDA2P40045 126 aa2.38□□□□□ -2.03
UBX5YDR330W YHR213W-BQ8TGK1 99 aa2.38□□□□□ -2.03
UBX5YDR330W YHL018WP38744 120 aaPredicted RBP2.37□□□□□ -2.03
UBX5YDR330W COX23P38824 151 aa2.37□□□□□ -2.03
UBX5YDR330W YOR072WQ08486 104 aa2.37□□□□□ -2.03
UBX5YDR330W YLR412C-AQ3E742 68 aa2.37□□□□□ -2.03
UBX5YDR330W YPL038W-AQ3E7B4 63 aa2.37□□□□□ -2.03
UBX5YDR330W RPS28BP0C0X0 67 aaKnown RBP2.37□□□□□ -2.03
UBX5YDR330W ATP20Q12233 115 aa2.37□□□□□ -2.03
UBX5YDR330W YJL133C-AQ3E7A3 74 aa2.37□□□□□ -2.03
UBX5YDR330W RPS28AQ3E7X9 67 aaPredicted RBP2.37□□□□□ -2.03
UBX5YDR330W LCL2Q08045 131 aa2.35□□□□□ -2.03
UBX5YDR330W YGR121W-AQ3E816 71 aa2.35□□□□□ -2.03
UBX5YDR330W YCR050CP25630 102 aa2.34□□□□□ -2.03
UBX5YDR330W YLR162WQ06235 118 aa2.34□□□□□ -2.03
UBX5YDR330W YOR304C-AO14468 76 aa2.33□□□□□ -2.04
UBX5YDR330W YJL197C-AP0C5P0 93 aa2.33□□□□□ -2.04
UBX5YDR330W TOM6P33448 61 aa2.33□□□□□ -2.04
UBX5YDR330W MIC10Q96VH5 97 aa2.33□□□□□ -2.04
UBX5YDR330W SPG1P50088 95 aa2.32□□□□□ -2.04
UBX5YDR330W LCL1Q02786 101 aa2.32□□□□□ -2.04
UBX5YDR330W YDR246W-AQ3E763 66 aa2.32□□□□□ -2.04
UBX5YDR330W YER187WP40102 141 aa2.32□□□□□ -2.04
UBX5YDR330W YOR314WQ12506 109 aa2.32□□□□□ -2.04
UBX5YDR330W YBR027CP38220 110 aa2.31□□□□□ -2.04
UBX5YDR330W NOP10Q6Q547 58 aaPredicted RBP2.31□□□□□ -2.04
UBX5YDR330W AIM4P38305 123 aaPredicted RBP2.29□□□□□ -2.04
UBX5YDR330W SBH1P52870 82 aa2.29□□□□□ -2.04
UBX5YDR330W YAR064WP39563 99 aa2.27□□□□□ -2.05
UBX5YDR330W YIR021W-AQ3E739 70 aa2.27□□□□□ -2.05
UBX5YDR330W YHR086W-AQ3E746 53 aa2.27□□□□□ -2.05
UBX5YDR330W YDR182W-AQ3E796 67 aa2.27□□□□□ -2.05
UBX5YDR330W YOL097W-AQ3E7Y9 61 aa2.27□□□□□ -2.05
UBX5YDR330W YOL166W-AQ8TGJ1 51 aa2.27□□□□□ -2.05
UBX5YDR330W YLR157W-DP0CE99 70 aa2.27□□□□□ -2.05
UBX5YDR330W RPL36AP05745 100 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms