RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	SPG4	Q04438	115 aa		3.12	□□□□□ -1.91
UPC2	YDR213W	YOR376W-A	Q3E805	51 aa		3.12	□□□□□ -1.91
UPC2	YDR213W	YHL005C	P38752	130 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	YOL014W	Q08110	124 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	YNL277W-A	Q3E7Z0	62 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	TAR1	Q8TGM6	124 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	YBL081W	P38180	368 aa	Known RBP	3.11	□□□□□ -1.91
UPC2	YDR213W	GAT4	P40569	121 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	MRPS8	Q03799	155 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	YOR020W-A	Q3E824	90 aa		3.11	□□□□□ -1.91
UPC2	YDR213W	YGL260W	P53056	76 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	YGL034C	P53186	121 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	YOR314W	Q12506	109 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	RPS30A	P0CX33	63 aa	Known RBP	3.1	□□□□□ -1.91
UPC2	YDR213W	RPS30B	P0CX34	63 aa	Known RBP	3.1	□□□□□ -1.91
UPC2	YDR213W	YIL102C	P40488	101 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	YDR274C	P87283	123 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	YLR162W	Q06235	118 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	YMR122W-A	Q3E842	84 aa		3.1	□□□□□ -1.91
UPC2	YDR213W	YAL065C	O13511	128 aa		3.09	□□□□□ -1.91
UPC2	YDR213W	HOT13	P36078	116 aa		3.09	□□□□□ -1.91
UPC2	YDR213W	YGR121W-A	Q3E816	71 aa		3.09	□□□□□ -1.91
UPC2	YDR213W	YGR164W	P53291	111 aa		3.09	□□□□□ -1.92
UPC2	YDR213W	CRC1	Q12289	327 aa		3.09	□□□□□ -1.92
UPC2	YDR213W	YOL166W-A	Q8TGJ1	51 aa		3.09	□□□□□ -1.92
UPC2	YDR213W	TSC3	Q3E790	80 aa		3.08	□□□□□ -1.92
UPC2	YDR213W	SPT4	P32914	102 aa	Predicted RBP	3.07	□□□□□ -1.92
UPC2	YDR213W	PEX22	P39718	180 aa		3.07	□□□□□ -1.92
UPC2	YDR213W	YCR001W	P25347	104 aa		3.07	□□□□□ -1.92
UPC2	YDR213W	YMR122C	Q03879	124 aa		3.07	□□□□□ -1.92
UPC2	YDR213W	YPS5	P53057	165 aa		3.06	□□□□□ -1.92
UPC2	YDR213W	YCR041W	P37265	110 aa		3.06	□□□□□ -1.92
UPC2	YDR213W	HOR7	Q05827	59 aa		3.06	□□□□□ -1.92
UPC2	YDR213W	YDR010C	Q12426	110 aa		3.06	□□□□□ -1.92
UPC2	YDR213W	YCL042W	P25572	119 aa		3.06	□□□□□ -1.92
UPC2	YDR213W	SPC1	P46965	94 aa		3.06	□□□□□ -1.92
UPC2	YDR213W	RPL36B	O14455	100 aa	Known RBP	3.05	□□□□□ -1.92
UPC2	YDR213W	RPL36A	P05745	100 aa	Predicted RBP	3.05	□□□□□ -1.92
UPC2	YDR213W	RPB9	P27999	122 aa		3.05	□□□□□ -1.92
UPC2	YDR213W	MVB12	P42939	101 aa		3.05	□□□□□ -1.92
UPC2	YDR213W	LIP1	Q03579	150 aa		3.05	□□□□□ -1.92
UPC2	YDR213W	YHR213W-B	Q8TGK1	99 aa		3.05	□□□□□ -1.92
UPC2	YDR213W	YGR035W-A	Q45U48	73 aa		3.04	□□□□□ -1.92
UPC2	YDR213W	YPR153W	Q06537	140 aa		3.04	□□□□□ -1.92
UPC2	YDR213W	YNL162W-A	Q3E7A8	72 aa		3.04	□□□□□ -1.92
UPC2	YDR213W	YPR010C-A	A5Z2X5	72 aa		3.03	□□□□□ -1.92
UPC2	YDR213W	YAL064W	P39711	94 aa		3.03	□□□□□ -1.92
UPC2	YDR213W	OST5	Q92316	86 aa		3.03	□□□□□ -1.92
UPC2	YDR213W	YER188C-A	P0C0V2	99 aa		3.02	□□□□□ -1.93
UPC2	YDR213W	MMS2	P53152	137 aa		3.02	□□□□□ -1.93
UPC2	YDR213W	YJL133C-A	Q3E7A3	74 aa		3.02	□□□□□ -1.93
UPC2	YDR213W	YJL127C-B	Q3E828	52 aa		3.02	□□□□□ -1.93
UPC2	YDR213W	FYV5	P25585	152 aa		3.01	□□□□□ -1.93
UPC2	YDR213W	YDR182W-A	Q3E796	67 aa		3.01	□□□□□ -1.93
UPC2	YDR213W	YAR023C	D6VPM8	179 aa		3.01	□□□□□ -1.93
UPC2	YDR213W	HHF1	P02309	103 aa	Known RBP	3.01	□□□□□ -1.93
UPC2	YDR213W	AQY2	P0CD90	149 aa		3.01	□□□□□ -1.93
UPC2	YDR213W	EDC2	P40023	145 aa	Predicted RBP	3	□□□□□ -1.93
UPC2	YDR213W	COX23	P38824	151 aa		2.99	□□□□□ -1.93
UPC2	YDR213W	IGD1	P43598	195 aa		2.99	□□□□□ -1.93
UPC2	YDR213W	YBR230W-A	Q3E762	66 aa		2.99	□□□□□ -1.93
UPC2	YDR213W	RPL29	P05747	59 aa	Predicted RBP	2.99	□□□□□ -1.93
UPC2	YDR213W	SPO24	Q3E752	67 aa		2.99	□□□□□ -1.93
UPC2	YDR213W	MEC1	P38111	2368 aa		2.99	□□□□□ -1.93
UPC2	YDR213W	DYN1	P36022	4092 aa		2.98	□□□□□ -1.93
UPC2	YDR213W	YBR056W-A	I2HB52	66 aa		2.98	□□□□□ -1.93
UPC2	YDR213W	YIL156W-B	Q2V2P4	73 aa		2.98	□□□□□ -1.93
UPC2	YDR213W	YHR212W-A	P0CX91	67 aa		2.98	□□□□□ -1.93
UPC2	YDR213W	YBL039W-B	P0C268	59 aa		2.97	□□□□□ -1.93
UPC2	YDR213W	YEL045C	P32616	141 aa		2.97	□□□□□ -1.93
UPC2	YDR213W	YHR007C-A	Q07074	71 aa		2.96	□□□□□ -1.94
UPC2	YDR213W	YKL065W-A	Q2V2P2	73 aa		2.96	□□□□□ -1.94
UPC2	YDR213W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.96	□□□□□ -1.94
UPC2	YDR213W	YCR095W-A	Q3E787	52 aa		2.96	□□□□□ -1.94
UPC2	YDR213W	YLR157W-D	P0CE99	70 aa		2.95	□□□□□ -1.94
UPC2	YDR213W	RPC10	P40422	70 aa		2.95	□□□□□ -1.94
UPC2	YDR213W	BSC4	P53841	131 aa		2.95	□□□□□ -1.94
UPC2	YDR213W	Q0032	Q9ZZX7	96 aa		2.95	□□□□□ -1.94
UPC2	YDR213W	ECM19	Q06011	112 aa		2.94	□□□□□ -1.94
UPC2	YDR213W	YMR230W-A	Q3E7B5	62 aa		2.94	□□□□□ -1.94
UPC2	YDR213W	YML100W-A	Q8TGT0	57 aa		2.94	□□□□□ -1.94
UPC2	YDR213W	YDL241W	Q07738	123 aa		2.93	□□□□□ -1.94
UPC2	YDR213W	YGR240C-A	Q3E786	66 aa		2.93	□□□□□ -1.94
UPC2	YDR213W	SNA2	P56508	79 aa		2.92	□□□□□ -1.94
UPC2	YDR213W	YMR001C-A	Q8TGS9	76 aa		2.92	□□□□□ -1.94
UPC2	YDR213W	YNL042W-B	Q3E7Z2	85 aa		2.92	□□□□□ -1.94
UPC2	YDR213W	AUA1	P32450	94 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	YAR064W	P39563	99 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	YDR115W	Q04598	105 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	YHR125W	P38831	101 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	YGL193C	P53097	103 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	SDH6	Q3E785	79 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	Q0297	Q9ZZV8	51 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
UPC2	YDR213W	YLR307C-A	Q3E825	87 aa		2.91	□□□□□ -1.94
UPC2	YDR213W	RPL33A	P05744	107 aa	Known RBP	2.9	□□□□□ -1.95
UPC2	YDR213W	RPL33B	P41056	107 aa	Known RBP	2.9	□□□□□ -1.95
UPC2	YDR213W	DDR2	P89113	61 aa		2.9	□□□□□ -1.95
UPC2	YDR213W	LCL2	Q08045	131 aa		2.89	□□□□□ -1.95
UPC2	YDR213W	YOR072W	Q08486	104 aa		2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms