RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPC2YDR213W SPG4Q04438 115 aa3.12□□□□□ -1.91
UPC2YDR213W YOR376W-AQ3E805 51 aa3.12□□□□□ -1.91
UPC2YDR213W YHL005CP38752 130 aa3.11□□□□□ -1.91
UPC2YDR213W YOL014WQ08110 124 aa3.11□□□□□ -1.91
UPC2YDR213W YNL277W-AQ3E7Z0 62 aa3.11□□□□□ -1.91
UPC2YDR213W TAR1Q8TGM6 124 aa3.11□□□□□ -1.91
UPC2YDR213W YBL081WP38180 368 aaKnown RBP3.11□□□□□ -1.91
UPC2YDR213W GAT4P40569 121 aa3.11□□□□□ -1.91
UPC2YDR213W MRPS8Q03799 155 aa3.11□□□□□ -1.91
UPC2YDR213W YOR020W-AQ3E824 90 aa3.11□□□□□ -1.91
UPC2YDR213W YGL260WP53056 76 aa3.1□□□□□ -1.91
UPC2YDR213W YGL034CP53186 121 aa3.1□□□□□ -1.91
UPC2YDR213W YOR314WQ12506 109 aa3.1□□□□□ -1.91
UPC2YDR213W RPS30AP0CX33 63 aaKnown RBP3.1□□□□□ -1.91
UPC2YDR213W RPS30BP0CX34 63 aaKnown RBP3.1□□□□□ -1.91
UPC2YDR213W YIL102CP40488 101 aa3.1□□□□□ -1.91
UPC2YDR213W YDR274CP87283 123 aa3.1□□□□□ -1.91
UPC2YDR213W YLR162WQ06235 118 aa3.1□□□□□ -1.91
UPC2YDR213W YMR122W-AQ3E842 84 aa3.1□□□□□ -1.91
UPC2YDR213W YAL065CO13511 128 aa3.09□□□□□ -1.91
UPC2YDR213W HOT13P36078 116 aa3.09□□□□□ -1.91
UPC2YDR213W YGR121W-AQ3E816 71 aa3.09□□□□□ -1.91
UPC2YDR213W YGR164WP53291 111 aa3.09□□□□□ -1.92
UPC2YDR213W CRC1Q12289 327 aa3.09□□□□□ -1.92
UPC2YDR213W YOL166W-AQ8TGJ1 51 aa3.09□□□□□ -1.92
UPC2YDR213W TSC3Q3E790 80 aa3.08□□□□□ -1.92
UPC2YDR213W SPT4P32914 102 aaPredicted RBP3.07□□□□□ -1.92
UPC2YDR213W PEX22P39718 180 aa3.07□□□□□ -1.92
UPC2YDR213W YCR001WP25347 104 aa3.07□□□□□ -1.92
UPC2YDR213W YMR122CQ03879 124 aa3.07□□□□□ -1.92
UPC2YDR213W YPS5P53057 165 aa3.06□□□□□ -1.92
UPC2YDR213W YCR041WP37265 110 aa3.06□□□□□ -1.92
UPC2YDR213W HOR7Q05827 59 aa3.06□□□□□ -1.92
UPC2YDR213W YDR010CQ12426 110 aa3.06□□□□□ -1.92
UPC2YDR213W YCL042WP25572 119 aa3.06□□□□□ -1.92
UPC2YDR213W SPC1P46965 94 aa3.06□□□□□ -1.92
UPC2YDR213W RPL36BO14455 100 aaKnown RBP3.05□□□□□ -1.92
UPC2YDR213W RPL36AP05745 100 aaPredicted RBP3.05□□□□□ -1.92
UPC2YDR213W RPB9P27999 122 aa3.05□□□□□ -1.92
UPC2YDR213W MVB12P42939 101 aa3.05□□□□□ -1.92
UPC2YDR213W LIP1Q03579 150 aa3.05□□□□□ -1.92
UPC2YDR213W YHR213W-BQ8TGK1 99 aa3.05□□□□□ -1.92
UPC2YDR213W YGR035W-AQ45U48 73 aa3.04□□□□□ -1.92
UPC2YDR213W YPR153WQ06537 140 aa3.04□□□□□ -1.92
UPC2YDR213W YNL162W-AQ3E7A8 72 aa3.04□□□□□ -1.92
UPC2YDR213W YPR010C-AA5Z2X5 72 aa3.03□□□□□ -1.92
UPC2YDR213W YAL064WP39711 94 aa3.03□□□□□ -1.92
UPC2YDR213W OST5Q92316 86 aa3.03□□□□□ -1.92
UPC2YDR213W YER188C-AP0C0V2 99 aa3.02□□□□□ -1.93
UPC2YDR213W MMS2P53152 137 aa3.02□□□□□ -1.93
UPC2YDR213W YJL133C-AQ3E7A3 74 aa3.02□□□□□ -1.93
UPC2YDR213W YJL127C-BQ3E828 52 aa3.02□□□□□ -1.93
UPC2YDR213W FYV5P25585 152 aa3.01□□□□□ -1.93
UPC2YDR213W YDR182W-AQ3E796 67 aa3.01□□□□□ -1.93
UPC2YDR213W YAR023CD6VPM8 179 aa3.01□□□□□ -1.93
UPC2YDR213W HHF1P02309 103 aaKnown RBP3.01□□□□□ -1.93
UPC2YDR213W AQY2P0CD90 149 aa3.01□□□□□ -1.93
UPC2YDR213W EDC2P40023 145 aaPredicted RBP3□□□□□ -1.93
UPC2YDR213W COX23P38824 151 aa2.99□□□□□ -1.93
UPC2YDR213W IGD1P43598 195 aa2.99□□□□□ -1.93
UPC2YDR213W YBR230W-AQ3E762 66 aa2.99□□□□□ -1.93
UPC2YDR213W RPL29P05747 59 aaPredicted RBP2.99□□□□□ -1.93
UPC2YDR213W SPO24Q3E752 67 aa2.99□□□□□ -1.93
UPC2YDR213W MEC1P38111 2368 aa2.99□□□□□ -1.93
UPC2YDR213W DYN1P36022 4092 aa2.98□□□□□ -1.93
UPC2YDR213W YBR056W-AI2HB52 66 aa2.98□□□□□ -1.93
UPC2YDR213W YIL156W-BQ2V2P4 73 aa2.98□□□□□ -1.93
UPC2YDR213W YHR212W-AP0CX91 67 aa2.98□□□□□ -1.93
UPC2YDR213W YBL039W-BP0C268 59 aa2.97□□□□□ -1.93
UPC2YDR213W YEL045CP32616 141 aa2.97□□□□□ -1.93
UPC2YDR213W YHR007C-AQ07074 71 aa2.96□□□□□ -1.94
UPC2YDR213W YKL065W-AQ2V2P2 73 aa2.96□□□□□ -1.94
UPC2YDR213W YOL013W-AP0C272 63 aaPredicted RBP2.96□□□□□ -1.94
UPC2YDR213W YCR095W-AQ3E787 52 aa2.96□□□□□ -1.94
UPC2YDR213W YLR157W-DP0CE99 70 aa2.95□□□□□ -1.94
UPC2YDR213W RPC10P40422 70 aa2.95□□□□□ -1.94
UPC2YDR213W BSC4P53841 131 aa2.95□□□□□ -1.94
UPC2YDR213W Q0032Q9ZZX7 96 aa2.95□□□□□ -1.94
UPC2YDR213W ECM19Q06011 112 aa2.94□□□□□ -1.94
UPC2YDR213W YMR230W-AQ3E7B5 62 aa2.94□□□□□ -1.94
UPC2YDR213W YML100W-AQ8TGT0 57 aa2.94□□□□□ -1.94
UPC2YDR213W YDL241WQ07738 123 aa2.93□□□□□ -1.94
UPC2YDR213W YGR240C-AQ3E786 66 aa2.93□□□□□ -1.94
UPC2YDR213W SNA2P56508 79 aa2.92□□□□□ -1.94
UPC2YDR213W YMR001C-AQ8TGS9 76 aa2.92□□□□□ -1.94
UPC2YDR213W YNL042W-BQ3E7Z2 85 aa2.92□□□□□ -1.94
UPC2YDR213W AUA1P32450 94 aa2.91□□□□□ -1.94
UPC2YDR213W YAR064WP39563 99 aa2.91□□□□□ -1.94
UPC2YDR213W YDR115WQ04598 105 aa2.91□□□□□ -1.94
UPC2YDR213W YHR125WP38831 101 aa2.91□□□□□ -1.94
UPC2YDR213W YGL193CP53097 103 aa2.91□□□□□ -1.94
UPC2YDR213W SDH6Q3E785 79 aa2.91□□□□□ -1.94
UPC2YDR213W Q0297Q9ZZV8 51 aa2.91□□□□□ -1.94
UPC2YDR213W GIS2P53849 153 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
UPC2YDR213W YLR307C-AQ3E825 87 aa2.91□□□□□ -1.94
UPC2YDR213W RPL33AP05744 107 aaKnown RBP2.9□□□□□ -1.95
UPC2YDR213W RPL33BP41056 107 aaKnown RBP2.9□□□□□ -1.95
UPC2YDR213W DDR2P89113 61 aa2.9□□□□□ -1.95
UPC2YDR213W LCL2Q08045 131 aa2.89□□□□□ -1.95
UPC2YDR213W YOR072WQ08486 104 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms