RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YAL065CO13511 128 aa2.9□□□□□ -1.94
PTA1YAL043C CUP1-1P0CX80 61 aa2.9□□□□□ -1.94
PTA1YAL043C CUP1-2P0CX81 61 aa2.9□□□□□ -1.94
PTA1YAL043C BET1P22804 142 aa2.9□□□□□ -1.94
PTA1YAL043C YHL042WP38729 150 aa2.9□□□□□ -1.94
PTA1YAL043C RDS3Q06835 107 aaPredicted RBP2.9□□□□□ -1.94
PTA1YAL043C EMC6Q12431 108 aa2.9□□□□□ -1.94
PTA1YAL043C YGR035W-AQ45U48 73 aa2.89□□□□□ -1.95
PTA1YAL043C MSA2P36157 363 aa2.89□□□□□ -1.95
PTA1YAL043C MVB12P42939 101 aa2.89□□□□□ -1.95
PTA1YAL043C TDA8Q6B2U8 126 aa2.89□□□□□ -1.95
PTA1YAL043C YEL045CP32616 141 aa2.88□□□□□ -1.95
PTA1YAL043C YFL019CP43576 117 aa2.88□□□□□ -1.95
PTA1YAL043C AQY2P0CD90 149 aa2.88□□□□□ -1.95
PTA1YAL043C YLR156WP0CE96 114 aa2.88□□□□□ -1.95
PTA1YAL043C YLR159WP0CE97 114 aa2.88□□□□□ -1.95
PTA1YAL043C YLR161WP0CE98 114 aa2.88□□□□□ -1.95
PTA1YAL043C YML100W-AQ8TGT0 57 aa2.87□□□□□ -1.95
PTA1YAL043C YLR236CA0A023PZG4 107 aa2.87□□□□□ -1.95
PTA1YAL043C SNA2P56508 79 aa2.87□□□□□ -1.95
PTA1YAL043C SGF11Q03067 99 aa2.87□□□□□ -1.95
PTA1YAL043C YOR268CQ08734 132 aa2.87□□□□□ -1.95
PTA1YAL043C YGR240C-AQ3E786 66 aa2.87□□□□□ -1.95
PTA1YAL043C YOR020W-AQ3E824 90 aa2.87□□□□□ -1.95
PTA1YAL043C YAR023CD6VPM8 179 aa2.86□□□□□ -1.95
PTA1YAL043C ATP18P81450 59 aa2.86□□□□□ -1.95
PTA1YAL043C YFR009W-AP0C5M9 85 aa2.86□□□□□ -1.95
PTA1YAL043C ICY1Q04329 127 aa2.86□□□□□ -1.95
PTA1YAL043C YSY6P38374 65 aa2.85□□□□□ -1.95
PTA1YAL043C IGD1P43598 195 aa2.85□□□□□ -1.95
PTA1YAL043C ICS3P47034 131 aa2.85□□□□□ -1.95
PTA1YAL043C ERI1P62651 68 aaKnown RBP2.85□□□□□ -1.95
PTA1YAL043C Q0032Q9ZZX7 96 aa2.85□□□□□ -1.95
PTA1YAL043C DDR48P18899 430 aaKnown RBP2.84□□□□□ -1.95
PTA1YAL043C RSM18P40033 138 aa2.84□□□□□ -1.95
PTA1YAL043C TDA2P40045 126 aa2.84□□□□□ -1.95
PTA1YAL043C YDR115WQ04598 105 aa2.84□□□□□ -1.95
PTA1YAL043C HHF1P02309 103 aaKnown RBP2.83□□□□□ -1.96
PTA1YAL043C YNL162W-AQ3E7A8 72 aa2.83□□□□□ -1.96
PTA1YAL043C YJL127C-BQ3E828 52 aa2.83□□□□□ -1.96
PTA1YAL043C YFR032C-BQ8TGU2 87 aa2.83□□□□□ -1.96
PTA1YAL043C YER175W-AQ8TGU4 54 aa2.83□□□□□ -1.96
PTA1YAL043C RPL33AP05744 107 aaKnown RBP2.83□□□□□ -1.96
PTA1YAL043C YER187WP40102 141 aa2.83□□□□□ -1.96
PTA1YAL043C RPC10P40422 70 aa2.83□□□□□ -1.96
PTA1YAL043C RPL33BP41056 107 aaKnown RBP2.83□□□□□ -1.96
PTA1YAL043C YOL014WQ08110 124 aa2.83□□□□□ -1.96
PTA1YAL043C SPG1P50088 95 aa2.82□□□□□ -1.96
PTA1YAL043C YBL039W-BP0C268 59 aa2.82□□□□□ -1.96
PTA1YAL043C YHR007C-AQ07074 71 aa2.81□□□□□ -1.96
PTA1YAL043C FYV5P25585 152 aa2.81□□□□□ -1.96
PTA1YAL043C YBR230W-AQ3E762 66 aa2.81□□□□□ -1.96
PTA1YAL043C YDR246W-AQ3E763 66 aa2.81□□□□□ -1.96
PTA1YAL043C YLL066W-BQ8TGJ7 56 aa2.81□□□□□ -1.96
PTA1YAL043C YPR195CQ06594 109 aa2.8□□□□□ -1.96
PTA1YAL043C ATP20Q12233 115 aa2.8□□□□□ -1.96
PTA1YAL043C YMR230W-AQ3E7B5 62 aa2.8□□□□□ -1.96
PTA1YAL043C RPL26AP05743 127 aaKnown RBP2.8□□□□□ -1.96
PTA1YAL043C YIL102CP40488 101 aa2.8□□□□□ -1.96
PTA1YAL043C RPL26BP53221 127 aaKnown RBP2.8□□□□□ -1.96
PTA1YAL043C BSC4P53841 131 aa2.8□□□□□ -1.96
PTA1YAL043C YHR213W-BQ8TGK1 99 aa2.8□□□□□ -1.96
PTA1YAL043C YHL005CP38752 130 aa2.79□□□□□ -1.96
PTA1YAL043C FYV12Q08559 129 aa2.79□□□□□ -1.96
PTA1YAL043C NOP10Q6Q547 58 aaPredicted RBP2.79□□□□□ -1.96
PTA1YAL043C RTC6O14464 93 aa2.79□□□□□ -1.96
PTA1YAL043C RPL29P05747 59 aaPredicted RBP2.79□□□□□ -1.96
PTA1YAL043C EDC2P40023 145 aaPredicted RBP2.78□□□□□ -1.96
PTA1YAL043C AIM4P38305 123 aaPredicted RBP2.78□□□□□ -1.97
PTA1YAL043C SPC1P46965 94 aa2.78□□□□□ -1.97
PTA1YAL043C YJL133C-AQ3E7A3 74 aa2.78□□□□□ -1.97
PTA1YAL043C YDL241WQ07738 123 aa2.77□□□□□ -1.97
PTA1YAL043C YOR381W-AQ3E804 55 aa2.77□□□□□ -1.97
PTA1YAL043C YGR121W-AQ3E816 71 aa2.77□□□□□ -1.97
PTA1YAL043C DDR2P89113 61 aa2.76□□□□□ -1.97
PTA1YAL043C YPR010C-AA5Z2X5 72 aa2.76□□□□□ -1.97
PTA1YAL043C RPL36BO14455 100 aaKnown RBP2.76□□□□□ -1.97
PTA1YAL043C AUA1P32450 94 aa2.75□□□□□ -1.97
PTA1YAL043C YOR314WQ12506 109 aa2.75□□□□□ -1.97
PTA1YAL043C YNL042W-BQ3E7Z2 85 aa2.75□□□□□ -1.97
PTA1YAL043C YBL008W-AQ3E821 79 aa2.75□□□□□ -1.97
PTA1YAL043C QCR10P37299 77 aa2.75□□□□□ -1.97
PTA1YAL043C GIS2P53849 153 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
PTA1YAL043C YLR162WQ06235 118 aa2.75□□□□□ -1.97
PTA1YAL043C YOR072WQ08486 104 aa2.73□□□□□ -1.97
PTA1YAL043C YLR307C-AQ3E825 87 aa2.73□□□□□ -1.97
PTA1YAL043C YDR034C-AP0C289 58 aa2.73□□□□□ -1.97
PTA1YAL043C COX23P38824 151 aa2.73□□□□□ -1.97
PTA1YAL043C SOM1Q05676 74 aa2.72□□□□□ -1.97
PTA1YAL043C DYN1P36022 4092 aa2.72□□□□□ -1.97
PTA1YAL043C YER188C-AP0C0V2 99 aa2.72□□□□□ -1.97
PTA1YAL043C YCR043CP25361 127 aa2.72□□□□□ -1.97
PTA1YAL043C LIP1Q03579 150 aa2.72□□□□□ -1.97
PTA1YAL043C RPS30AP0CX33 63 aaKnown RBP2.71□□□□□ -1.98
PTA1YAL043C RPS30BP0CX34 63 aaKnown RBP2.71□□□□□ -1.98
PTA1YAL043C ECM19Q06011 112 aa2.71□□□□□ -1.98
PTA1YAL043C YDR010CQ12426 110 aa2.71□□□□□ -1.98
PTA1YAL043C YGL041C-BQ3E750 60 aa2.71□□□□□ -1.98
PTA1YAL043C OST5Q92316 86 aa2.7□□□□□ -1.98
PTA1YAL043C YBR027CP38220 110 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms