RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 TANGO2Q6ICL3 276 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 CCDC186Q7Z3E2 898 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 ARID3BQ8IVW6 561 aaPredicted RBP21.39■■□□□ 1.01
PTCD3-220ENST00000627371 KXD1Q9BQD3 176 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 LRRC4Q9HBW1 653 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 TRPC7Q9HCX4 862 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 IFNKQ9P0W0 207 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 CUL9Q8IWT3 2517 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 TRIOO75962 3097 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 TRAV19A0A0A6YYK7 116 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 C2orf78A6NCI8 922 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 CFHP08603 1231 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 CYP11B1P15538 503 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 AVPR1AP37288 418 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 PBX1P40424 430 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 STAT1P42224 750 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 PDE6CP51160 858 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 TKTL1P51854 596 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 PMF1Q6P1K2 205 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 DENND1BQ6P3S1 775 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 CACNA2D4Q7Z3S7 1137 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 KHSRPQ92945 711 aaKnown RBP eCLIP21.38■■□□□ 1.01
PTCD3-220ENST00000627371 E2F7Q96AV8 911 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 HSFY1Q96LI6 401 aa21.38■■□□□ 1.01
PTCD3-220ENST00000627371 RPP25Q9BUL9 199 aaKnown RBP21.38■■□□□ 1.01
PTCD3-220ENST00000627371 TLR8Q9NR97 1041 aaKnown RBP21.38■■□□□ 1.01
PTCD3-220ENST00000627371 CHORDC1Q9UHD1 332 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-220ENST00000627371 DCXO43602 365 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 GFPT2O94808 682 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 PRAMEF12O95522 483 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 OLFM2O95897 454 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 ABL1P00519 1130 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 OAS1P00973 400 aaKnown RBP21.37■■□□□ 1.01
PTCD3-220ENST00000627371 VIPR2P41587 438 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 TUBP50607 506 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 ADIGQ0VDE8 80 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 SLC44A3Q8N4M1 653 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 SLC22A12Q96S37 553 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 OBP2AQ9NY56 170 aa21.37■■□□□ 1.01
PTCD3-220ENST00000627371 CKMP06732 381 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 TPM3P06753 285 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 USP17L7P0C7H9 530 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 KRT9P35527 623 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 RPL34P49207 117 aaKnown RBP21.36■■□□□ 1.01
PTCD3-220ENST00000627371 PGFP49763 221 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 RGS7P49802 495 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 ZNF268Q14587 947 aaPredicted RBP21.36■■□□□ 1.01
PTCD3-220ENST00000627371 PM20D1Q6GTS8 502 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 SIX6OS1Q8N1H7 587 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 SCML4Q8N228 414 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 ARL14EPQ8N8R7 260 aaPredicted RBP21.36■■□□□ 1.01
PTCD3-220ENST00000627371 EPS8L1Q8TE68 723 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 STK32AQ8WU08 396 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 PLA2G2FQ9BZM2 168 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 ULBP1Q9BZM6 244 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 XPO4Q9C0E2 1151 aaKnown RBP21.36■■□□□ 1.01
PTCD3-220ENST00000627371 TTYH3Q9C0H2 523 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 SMG9Q9H0W8 520 aaKnown RBP21.36■■□□□ 1.01
PTCD3-220ENST00000627371 LHX5Q9H2C1 402 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 KIF9Q9HAQ2 790 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 CNGB3Q9NQW8 809 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 MYO6Q9UM54 1294 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 DUSP12Q9UNI6 340 aa21.36■■□□□ 1.01
PTCD3-220ENST00000627371 A0A1W2PQH9 124 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 HEPACAM2A8MVW5 462 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 GABBR2O75899 941 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 ZBED1O96006 694 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 HDCP19113 662 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 PSEN1P49768 467 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 FIGNQ5HY92 759 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 HECTD3Q5T447 861 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 VITQ6UXI7 678 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 NOP9Q86U38 636 aaKnown RBP21.35■■□□□ 1.01
PTCD3-220ENST00000627371 ZNF677Q86XU0 584 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 PASD1Q8IV76 773 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 UBALD2Q8IYN6 164 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 CELF5Q8N6W0 485 aaKnown RBP21.35■■□□□ 1.01
PTCD3-220ENST00000627371 DEPDC1BQ8WUY9 529 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 DDX1Q92499 740 aaKnown RBP21.35■■□□□ 1.01
PTCD3-220ENST00000627371 BAP1Q92560 729 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 USP13Q92995 863 aaPredicted RBP21.35■■□□□ 1.01
PTCD3-220ENST00000627371 RSPRY1Q96DX4 576 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 CYP2S1Q96SQ9 504 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 NMUR1Q9HB89 426 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 CYLDQ9NQC7 956 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 TDP1Q9NUW8 608 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 CYTH4Q9UIA0 394 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 TICRRQ7Z2Z1 1910 aa21.35■■□□□ 1.01
PTCD3-220ENST00000627371 DPYSL4O14531 572 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 CBFA2T2O43439 604 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 ALADP13716 330 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 LCP1P13796 627 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 PSMC3P17980 439 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 ACADSBP45954 432 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 SLC7A9P82251 487 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 BHLHA9Q7RTU4 235 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 SCD5Q86SK9 330 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 GPIHBP1Q8IV16 184 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 FMNL3Q8IVF7 1028 aa21.34■■□□□ 1.01
PTCD3-220ENST00000627371 MFSD6LQ8IWD5 586 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms