RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NAPAP54920 295 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 SETQ01105 290 aaPredicted RBP7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 NCBP1Q09161 790 aaKnown RBP7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 SRSF6Q13247 344 aaKnown RBP7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 CAPSQ13938 189 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 IMMTQ16891 758 aaKnown RBP7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 ZSCAN23Q3MJ62 389 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 ARL13BQ3SXY8 428 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 PRAMEF14Q5SWL7 426 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 DCAF12L1Q5VU92 463 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 CENPPQ6IPU0 288 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 MIER3Q7Z3K6 550 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 CTCFLQ8NI51 663 aaPredicted RBP7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 GIPC2Q8TF65 315 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 EVI5LQ96CN4 794 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 CYP2S1Q96SQ9 504 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 GPR174Q9BXC1 333 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 OSBPL3Q9H4L5 887 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 PDZD7Q9H5P4 517 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 RUBCNLQ9H714 662 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 CD248Q9HCU0 757 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 EIF2B4Q9UI10 523 aaKnown RBP7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 MAFFQ9ULX9 164 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 TAF6LQ9Y6J9 622 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 TMEM131Q92545 1883 aa7.48□□□□□ -1.21
SCAMP1-206ENST00000618166 MTMR11A4FU01 709 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 SCAMP3O14828 347 aaKnown RBP7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 GAS7O60861 476 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ZNF217O75362 1048 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 KAT7O95251 611 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 FGF19O95750 216 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 HOXB2P14652 356 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 MX1P20591 662 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 CDC25CP30307 473 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 SFNP31947 248 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 SCTRP47872 440 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 CCT8P50990 548 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ANTXR2P58335 489 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 CENPCQ03188 943 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 USP4Q13107 963 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 NCAPHQ15003 741 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 EMC2Q15006 297 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ZC2HC1CQ53FD0 456 aaPredicted RBP7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ZNF654Q8IZM8 581 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ENGASEQ8NFI3 743 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 TOE1Q96GM8 510 aaKnown RBP7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 CEP170P1Q96L14 293 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 FAM20AQ96MK3 541 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 GCNAQ96QF7 691 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ACOX2Q99424 681 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 JPH2Q9BR39 696 aaPredicted RBP7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ESYT1Q9BSJ8 1104 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 KIF9Q9HAQ2 790 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 XPNPEP1Q9NQW7 623 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ANKRD6Q9Y2G4 727 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ASB3Q9Y575 518 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 RAD54BQ9Y620 910 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 ANK1P16157 1881 aa7.47□□□□□ -1.21
SCAMP1-206ENST00000618166 E2F8A0AVK6 867 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 PMS2P1A4D2B8 440 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 SMCO2A6NFE2 343 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 ZBTB39O15060 712 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 ANP32CO43423 234 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 PPFIA2O75334 1257 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 AGFG2O95081 481 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 LARGE1O95461 756 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 CYP17A1P05093 508 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 EDN1P05305 212 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 MSX1P28360 303 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 CD6P30203 668 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 UQCRFS1P47985 274 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 AP3B2Q13367 1082 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 CLCA4Q14CN2 919 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 PCBP1Q15365 356 aaKnown RBP eCLIP7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 INF2Q27J81 1249 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 RNF20Q5VTR2 975 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 LRCH2Q5VUJ6 765 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 C1QL3Q5VWW1 255 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 EEF1DP3Q658K8 133 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 UROC1Q96N76 676 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 SEPT5Q99719 369 aaPredicted RBP7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 SEMA3CQ99985 751 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 SLC25A18Q9H1K4 315 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 HRH3Q9Y5N1 445 aa7.46□□□□□ -1.21
SCAMP1-206ENST00000618166 SMIM28A0A1B0GU29 152 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 A0A1W2PNU3 283 aaPredicted RBP7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 ERICH2A1L162 156 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 VPS37CA5D8V6 355 aaPredicted RBP7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 WIPF3A6NGB9 483 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 KCNJ18B7U540 433 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 TADA3O75528 432 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 AP1G2O75843 785 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 MT-CO3P00414 261 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 C1SP09871 688 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 NLRP12P59046 1061 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 ERVPABLB-1P60509 514 aa7.46□□□□□ -1.22
SCAMP1-206ENST00000618166 ZXDBP98169 803 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms